Pterocles gutturalis (yellow-throated sandgrouse): 104459201
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Entry
104459201 CDS
T08540
Name
(RefSeq) LOW QUALITY PROTEIN: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pguu
Pterocles gutturalis (yellow-throated sandgrouse)
Pathway
pguu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pguu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104459201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pguu03041
]
104459201
03009 Ribosome biogenesis [BR:
pguu03009
]
104459201
Enzymes [BR:
pguu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104459201
Spliceosome [BR:
pguu03041
]
Complex A
U2 snRNP components
U2 related factors
104459201
Complex B
104459201
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
104459201
Ribosome biogenesis [BR:
pguu03009
]
Eukaryotic type
90S particles
Helicases
104459201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Flavi_DEAD
AAA_25
AAA_29
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
104459201
NCBI-ProteinID:
XP_010078392
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
IPTLHLNTXVSHFLFCLLTXFRKDRDRDRDRDDRSKDRDRDRDRDRDRDRERDKEKDLRP
TSNSTYYAAAGLPSIKPAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDILI
RHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDV
MLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDI
LMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDY
LEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYST
LPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRI
RVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVV
LQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQL
AKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVY
HAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRK
ALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCT
DIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
attcctacattgcatttaaatacttaagtatctcattttctgttctgtctcttaactnct
tttaggaaagatcgtgaccgggacagggaccgtgatgaccgttctaaagatcgcgacagg
gatcgtgacagagatagagatcgtgacagagaaagggacaaggaaaaagatttgcgacct
acatctaactctacgtattatgcagctgctgggttaccaagtataaaaccagcaatgatt
ccacacagtattaaccctttcacaaatctgccacatacaccacgatattatgacatcctg
aaaaaaaggctacaacttcctgtctgggaatataaagaaagatttacggatattttgatt
aggcatcagtcatttgtgctcgttggagagactgggtctggtaaaacaacacagatccct
caatggtgtgttgactacatgcgttcattacctggaccaaagaggggagtagcatgtacc
cagcctaggagagtagctgcaatgagtgtggcacagcgggttgctgatgaaatggatgtt
atgctgggccaggaggttggttactctattcgatttgaagactgcagtagtgcaaaaacc
attttgaagtatatgactgatggtatgctacttcgtgaagcaatgaatgatcctttgttg
gagcgttatggtgttataattcttgatgaggcccatgagagaacactggctactgatatt
ttgatgggcgttttgaaggaagttgtaagacaaaggtctgatctgaaggttatagttatg
agtgctactttagatgctggcaagtttcagatctattttgataactgtcctcttctaact
atcccgggtcgcacccatcctgtggagatattctatactccagaaccagaaagggactac
cttgaggctgccattcgaacagtgatccaaattcacatgtgtgaagaagaggaaggagat
ctcttactctttcttactggacaggaggagattgatgaagcctgcaagaggataaaacgt
gaaattgatgatttgggccctgaagttggtgacatcaaaatcattcctttgtattccacc
cttcctccacagcaacagcaaaggatttttgaacctccaccaccaaaaaaacaaaatgga
gcaataggaagaaaggttgttgtgtccactaatattgctgagacatcattaacaatagat
ggtgttgtgtttgtgattgatcctggctttgcaaaacagaaggtatataatcctcgtatc
agagtggagtctctcttggtgactgcgattagtaaagcttctgctcagcagcgagctgga
cgtgctggtcgtactagaccaggcaagtgcttcaggctttatacagagaaggcttacaaa
actgaaatgcaggataacacataccctgagattttgaggtctaacttaggatctgtagta
ttgcagctcaagaagcttggtatagatgatttggtgcactttgattttatggaccctcca
gctcctgaaactcttatgagagccttagagcttttgaattatctggctgctttaaatgat
gatggagacttgactgagttgggatccatgatggctgaatttccgttggacccacaactg
gctaaaatggttattgcaagttgtgactacaactgttctaatgaggtcctatctattact
gccatgttgtcagtcccacagtgttttgttcgccccacggaagcaaagaaagcagcagat
gaagccaagatgaggtttgcccacatagatggagatcatttgacattgctgaatgtctac
cacgctttcaaacaaaatcatgagtcggttcagtggtgttatgacaacttcattaactac
aggtccctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggatagattt
aatttgccccgtagaagcacagactttaccagccgagactattacatcaatataagaaag
gcattagttactgggtacttcatgcaggtggcacatttggaacgaacagggcattattta
acagtaaaagataaccaggtggtgcagttgcatccttccactgttcttgatcataaacca
gaatgggtgctctataatgagtttgtccttacaacaaagaattacatccggacatgtaca
gacatcaagccagaatggctcgtgaaaattgcccctcaatattatgacatgagcaatttc
ccacagtgcgaagcaaagagacagttggatcgcatcattgccaaacttcagtccaaggaa
tactcacagtactga
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