Pterocles gutturalis (yellow-throated sandgrouse): 104462373
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Entry
104462373 CDS
T08540
Symbol
DHX38
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
pguu
Pterocles gutturalis (yellow-throated sandgrouse)
Pathway
pguu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pguu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104462373 (DHX38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pguu03041
]
104462373 (DHX38)
Enzymes [BR:
pguu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104462373 (DHX38)
Spliceosome [BR:
pguu03041
]
Complex C
Other components
Step II factors
104462373 (DHX38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
T2SSE
Microtub_bd
ResIII
PhoH
AAA_30
AAA_16
DUF6449
Motif
Other DBs
NCBI-GeneID:
104462373
NCBI-ProteinID:
XP_010072591
LinkDB
All DBs
Position
Unknown
AA seq
1120 aa
AA seq
DB search
HYRSVHVETPSYTGGVSEEFWERSRQRERERREHGVFASSKEEKERKKERSRDRDHDRKR
DREERDRSHHSSRSERDGSSERSSRRSEPESPRHRPKDAATPSRSSWEEDDSGYSSGRRS
QWESPSPTPSYRDSERSHRPSSVRDMDRRDRDRSVRSRYSDKTPLPTPSYKYNEWADDRR
HLGSTPRLSRGRGRHADGEEGIAFETEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAY
SSEEYVKKREQHLHKQRQKRISAQRRQINEDNERWETNRMLTSGVVHRIEVDEDFEEDNS
AKVHLLMHNLVPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQLVRKHREQKERKR
AQHKHWELAGTKLGDIMGIKREEEKDEMVTEDGKVDYKTEQKFAEHMKEKSEASSEFAKK
KSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMMXR
VAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTVIKYMTDGILLRESLREADLDNYS
AIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFANFFGNVPIFHIPGR
TFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEEL
EKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCK
LKVFNPRIGMDALQIYPISQANANQRAGRAGRTGPGHCFRLYTQSAYKNELLTTTVPEIQ
RTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMV
EFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQVREKFAVPESD
HLTYLNVYLQWKNNSFSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWD
VVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTK
EYMQCVTAVDGEWLAELGPMFYSIKHAGKSRQENRRRAKEEVSAMEEEMALAEEQLRARR
EEQERRNPLASARSTKIYTPGRKEQGEPLTPRRIPARFGL
NT seq
3364 nt
NT seq
+upstream
nt +downstream
nt
gcattaccgttctgtccatgtggaaacaccttcctacacggggggtgtcagcgaggagtt
ttgggaacgcagccggcagcgggaaagggagcgtcgggaacatggtgtctttgcctcctc
caaggaggagaaggaacgaaagaaggaacgcagtagggatcgggaccacgatcgtaaacg
ggaccgcgaggagcgggacagaagtcatcacagcagcagatcagagagagatggctcatc
agagcggagcagcagaaggagcgaaccagagagtcccagacatcggcccaaagatgcagc
cacgccgtctcgctccagctgggaggaagatgatagtggctacagcagcggccgccgctc
acagtgggaatctccctcacctacgccttcgtatcgagactcagagcgcagccaccggcc
ttcatcagtgcgggacatggaccgcagagaccgggacaggtctgtgaggagcaggtactc
ggataagacaccgttgcccaccccctcgtacaagtacaatgagtgggctgacgaccggag
acacctggggtccacaccgcggctgtccagagggagagggcggcatgcagatggggagga
gggcattgcctttgagacggaggaggagcggcagcagtgggaggacgaccagcggcaagc
cgaccgggactggtacatgatggatgagggctacgacgagtttcacaaccccttggccta
ctcctctgaggagtacgtgaagaagcgggagcagcacttgcacaagcagaggcagaagcg
catctcggcgcagcggcggcagatcaatgaggataacgagcgctgggagacaaatcgcat
gctgaccagtggtgtggttcatcggattgaagtggacgaagattttgaggaggataactc
cgctaaagtgcatctgttgatgcataacctggtgcctcctttcctagatggaaggattgt
cttcaccaagcagccagagccagtcatccctgtcaaggatgccacgtcggatttggccat
catagcccggaaaggcagccagttggtgcgcaagcacagggagcagaaggagcgtaagag
ggctcagcataaacactgggagctggcaggcacaaaactgggagacattatggggatcaa
gagagaggaggagaaggatgagatggtgacagaagatggcaaagtcgattacaagactga
gcaaaagtttgctgaacacatgaaagaaaaaagcgaagccagcagtgagtttgccaagaa
gaaatcaatcctggagcagagacagtatctgcccatctttgctgtgcagcaggagctgct
ctccatcctcagagacaacagcattgtgattgtggtgggggagacggggagcgggaagac
gacgcagctgacgcagtacctgcacgaggatggctacacagactacggcatgatgnnccg
agtggccgccatgtcagtggccaagcgagtcagtgaagagatgggagtgcgtctagggga
ggaggtgggctacgccatccgctttgaggactgcacgtcagagaacacagtgatcaaata
catgacagatgggatccttctccgtgagtcactgcgagaggctgacctggacaactacag
tgctatcatcatggacgaggcgcatgagcgctccctcaatacggacgtactctttggcct
gcttcgggaggtggtggcccgacgctcagatctgaaacttgtggttacctctgccaccat
ggatgcagataagtttgccaacttcttcgggaacgttcctattttccacattcctgggcg
cactttccctgttgatattcttttcagcaagaccccgcaggaggattacgtggaggctgc
ggtgaaacaagccctgcaggtccatttgtccggtgctcctggagacatccttgtctttat
gcctggccaggaggacatagaggtgacctcagagcaaattgtggagcaccttgaggaact
ggagaaggctcctgctcttgctgtactgcctatctactctcagctgccgtcagacttgca
ggccaagatcttccagaaggctccagatggggtcaggaagtgcattgttgccactaacat
tgcagagacctcgctgacggtggacggcatcatgtttgtgattgattctggctactgcaa
gttgaaggttttcaacccccgtataggcatggatgcgctgcagatctaccccatcagtca
agccaatgccaatcagagggcaggccgagctggccggacaggcccaggccactgcttcag
gctctacacccagagtgcctacaagaacgagctgctgacaaccacggtgcccgagatcca
gcgcaccaacctggccaatgtagtgcttttgctcaagtccctgggtgtgcaggacctgct
gcagttccactttatggatccgccccctgaggacaacatgctgaactccatgtaccagct
gtggatcctgggggccctggataacacaggtggtttgacctcaactggacgtctcatggt
ggagttcccactggatcctgcactctccaaaatgctcattgtctcctgcgacatgggttg
cagctctgagatcttgctcattgtctccatgttgtctgttcctgccatcttttatcggcc
taagggccgagaggaggagagtgaccaagtgcgggagaaatttgctgttccagagagcga
tcacttgacttacctgaatgtttacctgcagtggaagaacaacagcttttctacgctgtg
gtgcaaccagcatttcatccatgccaaggccatgcggaaggtgcgggaggtgcgtgccca
gctcaaggacatcatggtgcagcagcggatgagcttagcctcctgtggtaccgactggga
tgttgtcaggaagtgcatctgtgctgcgtatttccatcaggctgcaaagctgaagggcat
tggggagtacgtgaacatccgcacaggcatgccctgccacctgcaccccaccagctctct
gtttggcatgggctatacaccagactacatcgtgtatcacgagttggtcatgaccaccaa
ggaatacatgcagtgtgtcactgctgtggatggagagtggctggcagagctggggcccat
gttctacagtatcaaacatgccggcaagtcacgccaggagaaccgccgccgtgccaagga
ggaagtgtctgccatggaggaagagatggctttggctgaggagcagctgcgagcgcgccg
ggaggagcaggaacgccgtaaccccctggccagcgcgagatctactaaaatctacacccc
tgggcggaaggagcagggggagcccctgacgccacgacgcatcccagcccgctttggcct
ctga
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integrated database retrieval system
