KEGG   Pterocles gutturalis (yellow-throated sandgrouse): 104462412
Entry
104462412         CDS       T08540                                 
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
  KO
K06237  collagen type IV alpha
Organism
pguu  Pterocles gutturalis (yellow-throated sandgrouse)
Pathway
pguu04382  Cornified envelope formation
pguu04510  Focal adhesion
pguu04512  ECM-receptor interaction
pguu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pguu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104462412 (COL4A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104462412 (COL4A1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104462412 (COL4A1)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    104462412 (COL4A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pguu04147]
    104462412 (COL4A1)
   00536 Glycosaminoglycan binding proteins [BR:pguu00536]
    104462412 (COL4A1)
Exosome [BR:pguu04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   104462412 (COL4A1)
Glycosaminoglycan binding proteins [BR:pguu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   104462412 (COL4A1)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 104462412
NCBI-ProteinID: XP_010072641
LinkDB
Position
Unknown
AA seq 1524 aa
MKGDPGEVIGLLPTSVLKGDKGFPGQPGLPGPPGAPGFQGPMGPQGPPGEPGPPGPPGLP
GEKGYMGLGFQGPKGEKGEQGVRGPPGPPGPAPHVKEKGTEIIRGEKGEPGEKGEQGAPG
FPGSGFKGEKGEPGKPGPRGKPGKDGDPGPKGEPGLPGGFGIPGRPGEPGLKGDKGERGF
PGPPGRVIDPGPVDTFGEKGEPGVSGLPGLKGQKGEKGFPGIQGIPGPPGRPLPDRVGSP
GVPGERGEKGEKGSPGFSLPGPPGRDGFPGPPGLPGPPGPPGVTDGIDQCQQGEPGAPGT
PGPPGRDGFPGEMGEKGDKGESCAFCDVGPPGLPGPQGPPGPAGFPGQSGFKGERGLPGL
DGLPGVPGPPGTPGLMGSPGAKGEPGDFSYPSILKGDKGDPGLPGQPGTPGREGRPGKDG
LPGLQGPKGAAGTAGLKGERGPPGQPGFPGVRGERGLPGPPGIGTAGLPGDKGDRGFAGT
PGLPGLPGAKGEAGRTVPLPGPPGADGLPGPPGFPGPQGDKGNPGLPGRPGLPGEKGAVG
QPGIGFPGPPGPKGFQGQPGSPGLPGTPGTPGLDGLPGVPGLQGQKGEPGVGLPGPKGLP
GPPGPAGIPGEKGNPGLPGLRGEQGFPGIPGQQGFRGDPGLPGLQGLQGPPGTPGPGPQG
LPGPAGQPGPQGPPGFPGIKGERGFPGIPGLDMPGPKGEKGSQGQPGVPGSVGLPGLPGP
QGAVGLKGSAGPKGEMGVMGTPGLPGTPGPVGDRGFPGEKGSPGFKGVVGPQGDPGVKGD
KGEAGLPGKPGTMDTMDMVSLKGQKGEQGEKGDHGATGEKGLRGDYGEPGIPGKDGEPGT
PGHPGPKGDQGPPGYPGDPGIPGQKGSVGEMGLPGTPGEKGLPGVPGSPGTPGFPGQKGE
KGDKGAPGFPGIGFPGAPGEKGEPGRTGSPGSSGDKGEKGSAGIPGMPGAPGPKGSPGMA
GFPGNPGRHGEKGEKGLPGLSGIPGLKGEPGEPGVPGPAGAIGQKGEPGYDGIPGAAGAK
GEQGIPGRGLPGFPGAKGDKGAKGEVGFPGSPGSPGIPGLKGEPGYAGPPGPKGSQGLPG
LPGSAIEGPKGDRGPQGQPGLPGLPGPTGPPGPPGLKGAKGEQGSNGWPGTPGGPGVKGD
PGFQGLPGSPGLPGDIGQKGDLGPPGVPGVPGPKGSPGFPGLKGERGDQGLPGSKGLQGP
PGPPGAFQLVKGDPGLPGPVGPVGLKGFPGLPGPKGQQGVTGPSGIPGPPGSPGFDGKPG
QKGEVGPYGPPGPRGFPGPPGPEGLPGAMGPPGAPSVAHGFLVTRHSQTIEEPSCPSGTR
LIYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTMPFLFCNINNVCNFASRNDYSYWLST
PEPMPMNMAPITGENIRPFISRCSVCEAPAMVIAVHSQTIQIPPCPEGWSSLWIGYSFVM
HTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANAYSFWLATIERNEMFKKP
TPSTLKAGDLRSNVSRCQVCMRQT
NT seq 4575 nt   +upstreamnt  +downstreamnt
atgaagggagatccaggtgaagtgattggtcttttacctactagtgtgctaaaaggtgat
aaaggctttcctggccaacctggactacctggtccgcctggagctccagggtttcaggga
ccaatggggccacaagggcctccaggagaaccaggtcctccagggccaccaggactccca
ggagagaagggctacatgggcttgggctttcagggtcccaaaggtgaaaagggagaacaa
ggggtaaggggccccccaggcccaccaggaccagcaccacatgtgaaagaaaaagggact
gaaataataaggggagaaaagggtgagccaggtgaaaagggtgaacagggagccccagga
tttccaggttcaggtttcaaaggagaaaaaggtgaacctgggaagcctggtccacgtgga
aagcctggaaaagatggtgatccaggaccaaaaggagaacccggtttgcctggtgggttt
gggattccaggacgacctggagagcctggtttgaagggtgacaaaggtgaacgaggtttt
ccaggacctccaggaagagttatagatcctggaccagtggatacctttggtgaaaaagga
gagcctggagtttcgggtttgcctggactgaaaggtcaaaaaggtgaaaaaggtttccct
ggtatacaaggaatcccaggacctccaggccgaccacttccagacagggtaggatcacct
ggtgtccctggagagagaggtgaaaaaggtgaaaagggttctccaggattctctttaccc
ggaccccctggaagagatggtttcccaggtcccccggggttgcctggcccaccaggtcca
ccaggagtaacagatggaattgatcagtgccagcagggagaacctggtgcaccaggtact
cctggacctccaggaagagatggatttccaggagagatgggagagaaaggtgacaaaggt
gaatcctgtgccttttgtgatgtgggacctcctggacttccaggaccacaagggccccca
ggtccagcaggttttccaggacaatcaggtttcaagggtgaaagaggcttacctggactt
gatggccttccaggggtacctggcccccccggcactccaggacttatgggcagccctggg
gcaaaaggagaaccaggagatttctcttatccttctatcctgaaaggtgacaaaggagat
cctggtttaccaggacaaccaggtactcctggaagagaaggaagaccaggaaaagatggt
ttgccaggtctccagggtccgaaaggagcagcgggtacagctggcttgaaaggagaacgt
ggtccccctggccaacccggattccctggagtacgtggtgaaagaggtcttcctggccct
cctgggataggcaccgcagggttacctggtgacaaaggagacagaggctttgctggaacc
ccaggtttaccaggccttccaggagcaaagggtgaagcaggacgaactgtaccactcccc
ggacctcctggggcagatggccttcctgggccacctggtttccctggaccccaaggtgac
aaagggaatcctgggcttccaggtagacctggtctgccaggagaaaaaggtgctgttggg
cagccaggtatagggttccctggacctccgggacccaaaggtttccaaggtcagcctggc
tcacctggtctgccggggactccaggaacccctggcctggatggtttgccaggtgtaccg
ggtttacaaggtcaaaaaggtgaacctggtgtaggcctccctggccctaagggattgcca
ggccccccaggcccagctggcatccctggagaaaagggaaatccaggactgccgggttta
cgtggcgagcaaggctttccgggcatacctggacagcaagggttcagaggtgaccccggc
ctcccaggactgcagggcttgcagggccctccgggcactccagggccaggcccacagggg
ttgccagggcccgccgggcagccgggaccccagggaccaccaggatttcctggaataaaa
ggagaaaggggattccctggtatccctggtctagatatgccaggaccaaaaggggaaaaa
ggtagccagggccagcccggggtaccagggtctgtggggctccccggcctgccgggtccg
cagggggctgttggactgaaaggatcagcaggacccaaaggagaaatgggagttatggga
actcctgggttgccaggaactcctggaccagttggagatcgagggtttcctggtgaaaaa
ggtagcccgggtttcaaaggtgtagttggaccacaaggtgatcctggtgtcaaaggagat
aaaggtgaagctggtctcccaggaaaacctggaacaatggataccatggacatggttagt
ctcaaaggccaaaaaggagaacaaggagaaaaaggggaccatggagcaacaggagaaaaa
gggttacgtggggattatggagaaccaggaattccaggaaaggatggtgaacctggtact
ccaggacatccaggaccaaaaggggatcagggccccccagggtacccaggggatccagga
attccaggacaaaaaggatcggttggtgaaatgggtttgccaggaacacctggagaaaag
ggtctgccgggagtaccaggttcaccaggcacaccagggttccctgggcaaaaaggtgaa
aaaggagacaaaggtgcaccaggttttcctggaattggctttccaggggctcctggtgag
aagggagaaccaggaagaacgggtagtccaggttcatctggagataagggtgaaaagggt
agtgcaggaattcctggaatgccgggtgccccaggtcccaaaggatcccctggcatggca
ggatttccaggcaaccccggccgccatggagaaaagggtgaaaaaggacttcctggctta
agtggcattccaggtttaaaaggagaaccaggtgaacctggcgttccgggtcctgctggt
gccattggacagaagggtgaaccaggttatgatgggattccaggtgcagctggtgcaaag
ggtgaacaaggtattccaggtagaggacttccaggatttcccggtgcaaagggagataaa
ggtgcaaaaggcgaagtgggttttccaggatcaccaggaagtccggggatcccaggcctg
aaaggagaaccaggatatgctggtccaccgggccctaagggcagccaaggtcttcctgga
ctaccaggaagtgcaattgagggccctaaaggagacagaggaccccaaggccaacctggc
cttccaggtttaccaggtccaacagggccaccaggacccccaggtctgaaaggggccaaa
ggagaacaaggaagcaatggctggcctgggactcctgggggtccaggagtcaaaggtgat
ccaggtttccagggactgccaggtagtccgggtttaccaggagatattggtcaaaagggt
gatctgggacctccaggagttccaggtgttccaggtccaaaaggatctcctggcttccca
ggccttaagggtgagcgaggtgaccaaggtcttcctggatctaaaggtttacagggccca
ccaggcccaccaggtgcttttcagcttgttaaaggagatcctggcttacctggccctgta
ggaccagttggtctcaaaggattcccaggacttccaggtcccaaaggacagcaaggggtg
acaggaccttcaggtatacctggaccacctggtagtccagggtttgatggtaaacctggg
caaaaaggagaagttggtccttatggtcctccagggcccagaggattccctggtccacct
ggccctgaaggtttgcctggggctatgggcccaccaggtgcaccgtctgttgcccatggc
ttccttgttaccagacacagtcaaaccattgaagaaccatcatgtccgtctggaacaagg
ctgatttaccacggctactccttgctttatgtacaaggcaatgaaagagcacatggccaa
gatctgggcacagcaggaagctgtcttcgtaaatttagtaccatgcctttcttattctgc
aatatcaacaatgtatgtaactttgcatcaaggaatgactattcctactggctatccact
cctgaacccatgccaatgaatatggctcctatcactggtgaaaatatcagaccattcatc
agcagatgctctgtgtgtgaagctcctgctatggtaatagccgttcacagtcaaacaatt
caaataccaccgtgtcctgaaggctggagttcactttggattggttactcatttgtcatg
cacaccagtgctggtgcggagggctctggccaggccctggcgtctcctggttcctgccta
gaggagttccgcagcgctcccttcattgaatgccatggccggggcacctgcaattattat
gcaaacgcttacagcttctggcttgccactatagagaggaatgagatgttcaagaaaccg
actccctcaactttgaaagcaggagatctgcgctcaaacgttagccgttgtcaagtctgt
atgagacaaacataa

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