Pterocles gutturalis (yellow-throated sandgrouse): 104465827
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Entry
104465827 CDS
T08540
Symbol
YTHDC2
Name
(RefSeq) probable ATP-dependent RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
pguu
Pterocles gutturalis (yellow-throated sandgrouse)
Brite
KEGG Orthology (KO) [BR:
pguu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pguu03041
]
104465827 (YTHDC2)
Enzymes [BR:
pguu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104465827 (YTHDC2)
Spliceosome [BR:
pguu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104465827 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
HA2_N
nSTAND3
Ank_2
ATPase
AAA_22
PhoH
Ank_4
AAA_23
AAA_7
SRP54
AAA_30
AAA_29
AAA_16
T2SSE
Motif
Other DBs
NCBI-GeneID:
104465827
NCBI-ProteinID:
XP_010077327
LinkDB
All DBs
Position
Unknown
AA seq
1358 aa
AA seq
DB search
MGAFERGQQSFSPSPSPKQLEMETLSKFPSGGSLLQGDLAGCEPGDSAPTHSCPQHLLRV
GKGSGWDKPCSSHSQVAYHSSGITANWKNRELNKARGRLNNGIPQVPVKRGESEFDSFRQ
SLPVFEKQEEIVRIIKDNKVVLIVGETGSGKTTQIPQFLLDDCYKNGTPCRIFCTQPRRL
AAVAVAERVAAERREKIGQTVGYQIRLESRVSPKTLLTFCTNGMLLRTLMAGDSTLWTVT
HVIVDEVHERDRFSDFLLIKLRDVLQDQPNLKLIISSAALDANLFIRYFGSCPVIHIQGR
PFEVKEMFLEDILRSTGYTNKEMVKYKKEKQREENQQSTLTEWCSAQENNIKTKSPRQRS
VPSATEECNLLDDGGDTVFNQLTEKDGNCLEPWLIKEMDSCLSDIWLHKDVDSFAQVFHL
ILTENVSVDYRHSETSVTALMIASGRGFLSQVEQLIGMGASIHCKSSNGWMAVDWAKRFG
QTEVVDLLESYSSSLEFGNLDESSLVQTSGSDLSAEDRELLKAYHHSFDDEKVDLDLIMH
LLYNICHSYDAGAILVFLPGYDEIVSLRDRILSDDKRFADNAHRYQVFMLHSNMQTLDQK
KVLKSPPSGVRKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKMVWISKA
SAIQRKGRAGRCKPGVCFHLFSRLRFQNMLDFQTPELLRMPLQELCLHTKLLAPINCPIV
DFLMKAPDPPPALIVRNAVQMLKTIDAMEPWEDLTELGYHLTELPVEPHLGKMVLCAVIL
KCLDPILTIACTLAYRDPFVLPTLASQKRAALLCRKRFTAGTFSDHMALLRVFQAWQKAR
SDGRERAFCEENFLSQATMEIIIGMRTQLLGQLRASGFVRARGGADIRDVNTNSENWAVV
KAALVAGMYPNLVHVDRESLVLTGAKEKKVRFHPTSVLSQPHYKKIPPANGQAAAIHALP
TDWLIYDEMTRAHRIANIRCCSVVTPVTVALFCGPARLPSNALQEASSFRGDGVSDDSDS
EVEDKTTANLALLKLDEWLHLKLDPEAAGLLLQLRQKWHSLFLRRMRAPSKPWCQVDEAT
VKAIVVVLSAEEQSAGLQQPSGIGQRPRPMTSEDLHSAYTWRSTNSRKSSAETEFSDDSS
STEKVLMKSTPPALHQPKNYKEKNILHSRRTSDDKSDQSSVKSTDSSSYASPCASPSCPI
SGKGSKSPSPRPNMPVRYFIMKSSNLQNIDISQQKGMWSTTPSNEQKLNRAFWESSMVYL
IFSVQGSGHFQGFARMASEIGCEKSQDWGSDGFGGVFKVEWIQKERIPFQFAHHLLNPWN
DNKKVQISRDGQELEPQVGEQLLQLWEHLPLSGKISSD
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgggagcatttgaaagaggtcagcagtcattcagtccttctccaagccccaaacagctc
gaaatggaaactctcagcaagttccccagtgggggatccctgcttcagggagacctggcg
ggctgtgaaccaggagattcagctcccacgcactcctgcccacagcaccttctcagggtg
gggaaagggagtggctgggataaaccctgttctagccatagccaggtggcataccactcc
tcgggaatcacagccaactggaaaaacagagaactgaacaaggcaagaggacgacttaac
aatggtatcccccaggttccagtgaaaagaggagaatcggagtttgattccttcagacag
tcactgccagtttttgaaaaacaggaagaaattgtcagaataataaaggacaataaagtt
gttttgattgtaggagagactggatcaggaaaaactactcaaatccctcagttccttctt
gatgactgttacaaaaatggaactccctgtcggatattttgcactcagccaagacgtttg
gcagctgttgctgtggctgaaagagtggcagcagaaagaagagaaaagattggccagaca
gttggttatcagatccgattagaaagcagggtttctccaaagacactgttaacattttgc
actaatggcatgctacttcgcacgctaatggcaggagacagcactttatggacagtgaca
catgttattgtggatgaagtgcatgagagggatagattcagtgacttcttgttaataaaa
ctgagagatgtgttgcaagaccagcctaatttaaaactaattatttcaagtgctgctcta
gatgcaaatctctttattaggtattttggaagttgcccagtaatacacatacaaggaaga
ccctttgaagttaaagagatgtttttggaggacattttacgaagcactgggtatacaaac
aaagagatggtaaagtacaaaaaagagaaacagcgagaagaaaaccagcaaagcactctt
acagagtggtgttctgctcaagaaaataatatcaaaacgaaatctccgagacaaagatct
gtcccaagtgcaactgaggagtgtaatctgttggatgatggtggtgacacagtatttaat
caactgactgagaaagatgggaattgccttgagccatggctaataaaagaaatggattct
tgtctttctgacatctggttacataaagatgttgattcctttgctcaggtgttccatctc
attttaactgaaaatgtcagtgttgactataggcatagtgaaaccagtgtgactgcacta
atgattgcttcagggagaggctttctgagtcaagtagaacaactgatcggtatgggagca
agtatccactgcaagtcatccaatggctggatggctgtggactgggctaagcgctttgga
cagacagaggttgttgacctattggagtcttacagttcttccctggaatttggaaatctg
gatgaaagttccctggtccaaacaagtggtagtgaccttagtgcagaggacagagaactg
ttaaaagcttatcatcacagttttgatgatgaaaaagtggatctagacctgattatgcac
ttactttataacatctgtcatagttatgatgctggagcaattttagtatttcttcctgga
tatgatgagatagttagcctgagggaccgtattctttctgatgacaagagatttgctgat
aatgctcacaggtaccaagttttcatgcttcattcaaatatgcagactttggatcagaag
aaggtgcttaaaagtccaccttctggcgtccgcaaaataattctttcaactaatattgca
gaaaccagcataacagtcaatgatgttgtgtttgtcatagactcgggcaagatgaaagag
aagtcttttgatgcactgagttgtgttacaatgctaaaaatggtgtggatttcaaaagcc
agtgctatccagagaaaaggcagggctgggcgctgtaagcctggagtctgttttcatctc
ttcagcaggctccgatttcagaatatgttggattttcagactccagaacttctaagaatg
ccacttcaggaactttgtttacacacaaaacttctggctccaattaattgtccaattgtt
gactttcttatgaaagctcctgatcctccaccagctttaattgtgagaaatgctgtgcaa
atgcttaagacaatagatgccatggaaccttgggaagatctcactgaacttggttatcat
ctcactgaattaccagtagagccacaccttggtaaaatggtgttgtgcgctgttattttg
aagtgcctggatcctattcttactattgcttgcactcttgcatatcgagacccttttgtc
ttacctacgttggcctctcaaaagcgggcagcgttgctgtgtagaaaacgttttactgca
ggaacatttagtgaccacatggctcttctgagggttttccaggcatggcagaaggcacgc
agtgatggccgggagagagccttctgtgaagagaactttctgtctcaagccacgatggaa
atcattataggaatgagaacacagttgcttggccagcttagagcctcaggttttgtgaga
gccagaggaggagctgatattagagatgttaatactaactctgaaaactgggctgtagtt
aaggctgccttagtggctgggatgtatcccaatctagtgcatgtagacagagaaagcctg
gttttgactggagcaaaggagaagaaagtgcgatttcatcctacctctgttcttagtcaa
cctcactataaaaagattcccccagcaaatgggcaagctgcagccatccacgcgctccct
acagactggcttatatatgatgaaatgacaagagctcacagaatagcaaatatcagatgc
tgttctgttgtaacacctgttactgtggcactcttctgtgggccagctaggttaccaagt
aatgctttgcaggaagcttcatcctttcgaggggatggagtatctgatgatagtgatagt
gaggtggaagacaaaacaactgctaatttggcactactgaagctagatgaatggctgcat
cttaaactggaccctgaagctgctggtttgctgttgcaactcagacagaagtggcatagc
ttatttttgcgtcgaatgcgagctccttctaaaccgtggtgtcaagttgacgaagcaact
gtaaaagcaattgtagttgttttaagtgctgaagaacagtctgcaggtttgcagcagccc
tcaggaattggtcagagaccaagacctatgacttctgaagaccttcattcagcatataca
tggaggtcaacaaacagtagaaaaagctcagcagaaactgaattctctgatgactcctcc
agcactgaaaaagttttaatgaaatctacacctcccgcacttcaccagccaaagaattac
aaagaaaaaaacattttgcactccagacgaacttcagatgacaagtcagatcagtcatca
gtgaagtctacagacagcagtagctatgctagcccctgtgctagtccttcttgtccaata
tctggaaagggttccaagtctccttcaccgagaccaaatatgccagttcggtactttata
atgaaaagtagcaacttgcaaaacattgatatttctcaacagaagggtatgtggtcaact
acgccaagtaatgaacaaaaactcaatagagccttttgggagagcagcatggtttactta
atattttctgttcaagggtctggacactttcagggttttgctagaatggcttcagagata
gggtgtgagaaaagtcaagactggggatctgatggttttggaggtgtatttaaggtggag
tggatccaaaaagaacggattccttttcagtttgcacatcatttgctcaacccttggaat
gacaataagaaagtacaaataagcagggatggccaggagctggaaccacaagttggagag
cagctgctacagctttgggaacatcttcctttgtcaggaaaaatctcaagtgactga
DBGET
integrated database retrieval system
