Pterocles gutturalis (yellow-throated sandgrouse): 104465838
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Entry
104465838 CDS
T08540
Symbol
PCF11
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
pguu
Pterocles gutturalis (yellow-throated sandgrouse)
Pathway
pguu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pguu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104465838 (PCF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pguu03021
]
104465838 (PCF11)
03019 Messenger RNA biogenesis [BR:
pguu03019
]
104465838 (PCF11)
Transcription machinery [BR:
pguu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104465838 (PCF11)
Messenger RNA biogenesis [BR:
pguu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
104465838 (PCF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
PCF11_charged
Pcf11_helical
Pfc11_Clp1_ID
Pcf11_C
zf_PCFS4
CID
SHOCT
Motif
Other DBs
NCBI-GeneID:
104465838
NCBI-ProteinID:
XP_010077345
LinkDB
All DBs
Position
Unknown
AA seq
1612 aa
AA seq
DB search
MYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRSTWDDIFPLKKLYA
LDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEESPAPTSAVTSGASTPPAVPEI
QKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQTKAQLAVSLSVQQGSSTIASVPAPS
KQHMSPTPHMTVKPPHQTAVQSEKTKPSPSPPLHDMKIVNRDPRLNRMAHHSSHAKDQSH
RKEFSSNTTSQSDTKANKTTQAEKQNLSKQEKLKSSEKTQKKELDQSEAKSKSPSPLKNK
LPNTKDTKSQECESTKVSEISKRDPRLRRHLQDKSEGKEEEVKEKRRNIEKKEKEEHKTS
EHRPVGSRNKIINGAVQKQDTTTEESEKQSGKQGRSSGRKRSRSRSPKSRSPSTHSPKRR
ERRSPKRRLRSLSPTSSTPKIGKIRQIGPKQSHVEEGTQAARDERNSNKRNVKQETRDPR
RAKKAQEDRPQETANQHPTKASPDPKENVENWQGSKSGKRWKSGWEENKNSQQNEEHQAF
GKSPHQRHRENWPAGKGVLSPRAPKQQHRLSVDANLQIPKELTSASKRELLKKANDRLTS
GEITQDEFLMVAHQIRQLFQYQEGKHRCNVWDSPTEEKCGLKKKPLLSDAELTYYEHKAK
LKRTQVQHSLSRLDLLDPDDILDYHLPDALLSGIECEQAKAKRGVQFDRKEPFGERSRRH
SPVSGTNRPFADNLSQLESRRRLEEQNATKGARGSKNLDPYESWGESDEFRDALRQQGKS
TPEFQKMDGDAICRFDNREERQLLGKAGVREEPRSPFSERFKRARFEDPEKAPFPESPGS
RFGGIEAKQRISALMEDRPLFDGSPRQPAARVGVDGPGSPFVDGPATGSSSRIDGPPGQA
AMRFEGPFDGPLAGAGGAGALRFDGPPGQLARALRFEGAPGQVGGGGPLRFEGPLGQIGG
PLRFEGPAGQPVGGPRFEGPGVGLRFESPRGQPSGGLRFEGPHGQPMGPRGQPGGGLRFE
GPHGQLLGPHGQPGGGLRFEGPHLQPLGPHGQPGGGLRFEGPHGQPLGPHGPSGGGLRLE
GPGVGPRLIDGPVHQGAGGLRFDGPLGRAGPRFDGCHAAGFDGQPGQLSLLQRFDGIHGQ
PVARFERAPGQQAQPRFDTAIPQRFDGPHQPASRFDLPLGPQGARFENVANHPASRLEMS
PYGQGGPFVEHPGQGYNGPSHGMQFQRPDIFDGSPGPNFNGPAGPGAQNFPLRAAGHYFD
EKGLAGPQYGNFNNMPMGSNQVSLMSAQPGPYGQGQQYLPNPGSFIQNPAGALPHSYPDN
HLGQVDVNELFAKLLKTGILKLSKTDSTSAQVNETSAQPAAEEEDDDQNEDQNVPDLTNF
TVEELRQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQNRTEKDVSRKITH
RRWYYSLTDWIEFEEIADLEERAKSQFFEKAHEEVVLKTQEAAKEKEFQSVPAGPAGAVE
SCEICQEQFEQYWDEEEEEWHLKNAIRVDEKIYHPSCYEDYQNTSSFDCTPSPSKTPVEN
PLNMVLNIVKQETQESCDSPKVKEEPEDTPTACAEESTPASTDIKTEPDESV
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atgtaccttatggattccattgtcaagaatgtgggaagagagtatcttactgcatttact
aaaaacctagttgcaacatttatttgtgtatttgaaaaggtggatgaaaatactaggaaa
agtttatttaaattacgctccacatgggatgatatttttcctttgaagaaactatatgca
cttgatgtcagagtcaactcattagatcctgcttggccaattaaacctctgcccccaaat
gtgaatacttctagcatccatgtgaatcctaagtttttaaataaatcgccagaggaatct
cctgcacctacctctgctgtcacttctggtgcctctactcctccagctgttccagaaata
caaaagaatttgacacaggagcaactgataaggcagcagttgcttgcaaagcaaaagcag
ttgttagaacttcagcaaaaaaaattagagctggagctggaacagactaaagcacagttg
gctgtatctcttagtgttcagcaaggatcatctactatagcttcagttccagcaccttcc
aagcaacatatgtctcctacacctcatatgacagttaaaccacctcatcagactgctgtg
caatccgaaaaaaccaaaccatcccccagtcctccacttcatgatatgaaaatagtaaat
agggatcctcgacttaataggatggctcaccattcttctcacgctaaagatcaatctcat
aggaaagaattttcatcaaacacaaccagtcagtctgataccaaggcaaacaaaacaaca
caggctgaaaaacaaaacttgtcaaagcaagaaaaactgaaatcaagtgaaaaaacacaa
aagaaagaacttgaccagtcagaagcaaaatctaaatcaccatcccctttgaaaaataag
ctacccaatactaaagataccaaaagccaggaatgtgaaagcacaaaagtgtctgaaatt
agtaagcgggatccaagactgagaagacatcttcaagataagtcagagggcaaagaggag
gaggtgaaagaaaagaggagaaatatagagaaaaaagaaaaagaggaacataagacatct
gaacatagaccagtaggcagcagaaataaaataattaatggtgctgttcagaaacaagac
acgactacggaggagtcagaaaaacagagtggaaagcaagggaggtcaagtggtagaaaa
cggtcacgatcacgctctcctaagtcacggtcaccatctacacattctccaaaaagacga
gagaggaggtcacccaaaagaagacttaggagtttatctcccacttcatcaactcctaaa
attggaaagatacgtcagataggccctaagcagtctcatgttgaagaaggcacgcaagca
gcaagagatgaaagaaattctaataagagaaatgttaaacaagagacacgagatccgagg
agagcgaaaaaagcccaggaagatagaccccaagaaacagcaaaccagcatcctacaaaa
gcttctcctgatccaaaggagaatgtagaaaactggcaaggatccaaatcaggcaagagg
tggaaatctggttgggaagaaaataaaaactcacagcagaatgaagaacaccaagcattt
ggtaaatctcctcaccaaagacaccgggaaaactggcctgctggtaaaggagttctgtca
ccccgagcaccaaagcaacaacaccggttaagtgtggatgctaatttacagattcccaaa
gaattgacatctgcaagcaagagggaattacttaagaaggccaatgaccgcttaacatct
ggtgaaataacacaagatgagttcctcatggtagctcatcagatccgacagctgttccag
tatcaggagggaaaacacagatgtaatgtttgggatagccctacagaggaaaaatgtggt
ctgaaaaagaaacctcttctttccgatgcagaattaacctattatgaacataaggctaaa
ctaaaaagaacacaagttcaacattcattgtcaaggcttgatctgttggatcctgatgat
attttggattatcatttgcctgatgctttgctctctggaatagaatgtgagcaagcaaaa
gccaagcgtggagtacagtttgacaggaaagaaccatttggagaaagatcaaggagacac
tctcctgtaagtggcactaatagaccttttgctgataacctctcacagcttgagagtcga
cggagacttgaggaacaaaatgcaactaaaggagcaagaggttctaaaaaccttgatcct
tacgagagctggggagaatcagatgaatttagagatgctctcagacaacaggggaagagc
acaccggagttccagaaaatggatggtgatgcaatctgcagatttgataatcgtgaggaa
agacagctgcttgggaaagctggtgttcgagaggaaccaagatcaccattcagtgaacgt
ttcaaaagagctaggtttgaagatccggagaaagcaccatttccagaaagtccaggatca
agatttggaggcattgaagcaaagcagaggataagtgcactgatggaagacagacctcta
tttgatggctcacctagacagcctgctgcaagggtcggggtagatggaccaggaagtcct
tttgttgatggtcctgccactggttcaagttccagaattgatgggccacctggacaggct
gctatgagatttgaggggccttttgatggaccactggcaggagcagggggagctggagcc
ctaagatttgatgggccaccagggcagctggcacgggccctgaggtttgaaggagcccca
ggacaggttggtggaggaggtccactgaggtttgagggacctcttggccagataggtggg
cctttgcggttcgaagggcctgcagggcagcctgtgggtggtcctagatttgaaggacct
ggagttggactcaggtttgagagtccccgtggtcagccttcaggtggtctcaggtttgag
ggacctcatggtcaacctatgggacctcgaggtcaaccagggggtggtctcaggtttgag
ggaccccatggtcagctcttggggcctcatggtcaaccagggggtggcctcaggtttgag
gggccacatttacagccattggggccccatggtcagcctggaggtggcctcaggtttgag
gggccacatggtcagcctttggggccacatggaccgtcaggtggtgggctcagattggaa
ggaccaggtgtaggtcctaggttgattgatggaccagtacaccagggagctggtggactt
cgatttgacggtcctctgggtcgggccggtccacgatttgatggttgtcatgcagctgga
tttgatggtcagcctggacagctgtctctcttgcaaagatttgatggaattcatggacag
cctgttgcaagatttgaaagggcgcctggccaacaggcacaaccacgatttgatacagcc
atacctcaaagatttgatggacctcaccagccagcctctagatttgacttgccccttggc
cctcaaggtgcacgtttcgaaaatgtagctaaccatcctgcctcaagactagaaatgtca
ccatacggacaaggtggtccgtttgtcgagcatcccggccagggctacaatggaccatct
catgggatgcagttccagaggccggatatatttgatggttcgcctggaccaaatttcaat
gggccagctggcccaggagcacagaatttcccattgagagcagctggacattactttgat
gaaaaaggtcttgcgggtcctcagtatgggaacttcaataatatgccaatgggaagtaat
caggtttctctcatgtctgctcagccagggccttatggccaaggtcaacagtatttgcca
aatcctggaagttttattcagaaccctgcaggagcccttccacattcatatcctgataac
caccttggacaggttgatgtcaatgagttgtttgctaaactgctgaaaactgggatcctc
aaactgtcaaaaactgattccacttcagcacaagtgaatgaaacatcagcccagccagct
gctgaagaggaagatgatgaccagaatgaagatcagaacgttccagacctcactaacttc
acagttgaagaactgagacagcgttatgacagtgtaataaatcgactgtacactggaatc
cagtgttactcatgcggaatgagattcactacttcacagacagatgtttatgcggatcat
ttagattggcattatcgtcagaaccggacagaaaaagatgttagcagaaaaattacacac
agaagatggtactacagtttaacggactggattgaatttgaagaaatagccgacctagag
gagcgtgcaaaaagccagttttttgaaaaagctcatgaagaggttgtgttgaagacacaa
gaagctgcaaaagagaaggaatttcagagtgtccctgctggaccagcaggagcagttgag
agctgtgaaatttgccaagagcaatttgaacagtactgggatgaggaagaagaggagtgg
cacctgaagaatgctatcagagtagatgaaaagatttaccatccatcttgctatgaagat
taccaaaatacatcatcatttgattgcacgccatctcccagcaagactcctgtagaaaat
ccactaaatatggtgttgaacattgttaaacaagaaacacaagagtcctgtgactcacct
aaagtcaaagaagaacctgaagacacccctactgcctgtgcagaagagagcacacctgca
tctacagatatcaaaacagaacctgatgagtctgtttaa
DBGET
integrated database retrieval system
