Pterocles gutturalis (yellow-throated sandgrouse): 104466507
Help
Entry
104466507 CDS
T08540
Symbol
RTCB
Name
(RefSeq) tRNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
pguu
Pterocles gutturalis (yellow-throated sandgrouse)
Brite
KEGG Orthology (KO) [BR:
pguu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pguu03016
]
104466507 (RTCB)
Enzymes [BR:
pguu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
104466507 (RTCB)
Transfer RNA biogenesis [BR:
pguu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
104466507 (RTCB)
Prokaryotic type
tRNA splicing ligases
104466507 (RTCB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Cu-oxidase_4
Motif
Other DBs
NCBI-GeneID:
104466507
NCBI-ProteinID:
XP_010078247
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
AGGFLPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPEAVVSPGGVGF
DINCGVRLLRTNLDETDVQPVKEQLAQAMFDHIPVGVGSKGVIPMNAKDLEEALEMGVDW
SLREGYAWAEDKEHCEEYGRMLQADPNKVSARAKKRGLPQLGTLGAGNHYAEIQVVDDIY
NEYAAKKMGIDHKGQVCVMIHSGSRGLGHQVATDALVAMEKAMKRDKIIVNDRQLACARI
ASVEGQDYLKGMAAAGNYAWVNRSSMTFLTRQAFAKVFNTTPDDLDMHVIYDVSHNIAKV
EQHVVDGKERTLLVHRKGSTRAFPPHHPLIAVDYQLTGQPVLIGGTMGTCSYVLTGTEQG
MTETFGTTCHGAGRALSRAKSRRNLDFQDVLDKLADMGIAIRVASPKLVMEEAPESYKNV
TDVVNTCHAAGISKKAIKLRPIAVIKG
NT seq
1346 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggtggctttttgcctgctatgaaacagattgggaatgtggctgcattacctggca
ttgttcatagatcaataggccttccagatgtccattctggctatgggtttgccattggca
acatggctgcctttgatatgaatgatcctgaagcagtggtgtcaccaggtggtgtcggat
ttgacatcaactgtggtgtccgcttactgcgtacaaatttggatgaaactgatgtgcagc
ctgtgaaagagcagcttgcccaggctatgtttgaccacattcctgttggtgttggttcca
agggtgtcatccccatgaatgccaaggatttggaagaggcactagagatgggtgtggact
ggtctctccgggaaggctatgcctgggcagaggacaaggagcactgtgaggaatatggaa
gaatgctgcaggctgaccccaacaaggtctctgcaagagcaaagaagaggggcctgcctc
agctggggaccctgggagctggaaatcattatgctgagatccaggttgtggatgacattt
acaacgaatatgctgccaagaagatgggcatcgaccacaaagggcaggtgtgcgtgatga
tccacagtggcagcagaggtctgggccaccaggttgccacagatgcgttggtggcaatgg
aaaaagctatgaaacgggacaaaatcatagtgaatgatcgccagctggcgtgtgccagaa
ttgcctccgtagagggacaggattacctgaagggaatggcagctgctggaaactatgcgt
gggtcaatcgctcttctatgacttttctaacgagacaggcctttgccaaagtcttcaaca
caaccccagatgaccttgatatgcatgttatctatgatgtgtctcacaacattgccaaag
tggagcaacatgtagtggatggaaaggagcggactctgctggtgcacagaaagggatcaa
ccagggccttccctcctcaccatccccttatcgctgttgattatcagctgactggacagc
ctgttttgattggcgggaccatgggcacctgtagctatgttcttactggcacagagcaag
gcatgactgagaccttcggaactacttgccatggagctggtcgtgcgctgtctcgagcca
aatctcgacgtaacttggacttccaggatgtattggacaagctggctgacatgggcattg
ccatccgtgttgcatctcccaaactggtcatggaagaagcaccagagtcttacaagaatg
tgacagatgtggttaacacctgccacgcagctggcatcagcaagaaagccattaaactga
gacctattgctgttataaaaggctag
DBGET
integrated database retrieval system
