Pterocles gutturalis (yellow-throated sandgrouse): 104467936
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Entry
104467936 CDS
T08540
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-6(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
pguu
Pterocles gutturalis (yellow-throated sandgrouse)
Pathway
pguu04510
Focal adhesion
pguu04512
ECM-receptor interaction
pguu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pguu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104467936
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104467936
09142 Cell motility
04820 Cytoskeleton in muscle cells
104467936
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pguu04147
]
104467936
00536 Glycosaminoglycan binding proteins [BR:
pguu00536
]
104467936
Exosome [BR:
pguu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104467936
Glycosaminoglycan binding proteins [BR:
pguu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104467936
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104467936
NCBI-ProteinID:
XP_010080211
LinkDB
All DBs
Position
Unknown
AA seq
1676 aa
AA seq
DB search
GGKKSYNGPCGGRDCSAGCKCFPEKGSRGRPGPIGLQGPIGAPGLTGPEGLPGAKGEKGA
VGPHGPAGQKGEKGPMGVPGFQGINGIPGHPGQSGPRGLPGLDGCNGTIGSPGVSGSDGF
PGLPGLPGLPGPKGLKGEPVFAQGGLKGMKGENGLPGLDGISGPKGFPGPIGSAGPIGLP
GLQGPMGPPGPPGPKGNMGLGFQGEKGEKGDVGLPGPPGPPPSTGILEFMGFPKGKQGEK
GEPGPQGFPGEKGLPGLPGFGGVGEKGEKGVPGLPGGRGLLGLDGSAGIPGRKGHPGVPG
YPGLDGVQGVKGELGDIGPPGPPIVIDREGLVISGAPGDPGNPGVPGPPGDDGISGLPGL
PGAPGFPGLERDGMGPGGSPGIPGVKGEVGEPGRATIGLPGTRGRDGLPGLPGAPGLPGS
PRPSFAPDTILNGRTGAPGEPGQRGLPGALGPKGYKGEAGDCACDGGVTRAGLKGISGLP
GPSGSPGVPGIKGIGGDPGTVGAPGLRGPPALAGQQGLAGLKGEKGDSSYATGRGARGDR
GATAPRGPSGIPGTPGRDGLPGLPGPPGPPGDGGLGFPGEKGLPGLPGSKGHRGETGSPG
VGYPGPSGVRGPPGDPGMDGFPGQAGLPGPPGITLPCIVPGAYGPPGTPGFPGLPGPKGS
KGFPGIPGQPGLHGSKGQPGSPGIIGLQGEPGFPGPRGEQGSQGLPGLDGTDGLPGKMGA
AGLAGTKGSPGEVFGAESGALGERGRPGLPGDKGLTGDLGFPGPKGLDGRPGLLGIKGEQ
GDPGYSGVPGLQGPPGPGGPFGIKGKPGPVGSVGLAGAPGCQGLPGVKGLTGDVGPQGPA
GMKGFPGLDGAPGSPGERGFLGPPGPFGQDGRPGFSGPKGEKGSSGLLGFPGMPGLPGVP
GVNGFKGAPGTAGGKGSPGIVGLQGQKGDRGDVGPPGLPVLGPPEQALQLKGDKGDPGLA
GLGGFPGPRGDKGISGSRGQPGLPGPMGSASKERGLHGDPGFPGPPGQPGLPGQKGTHGI
IGFPGRGXIPSXGSDGITGTLGFPGTIGLPGPKGDQGESVGIKKIAGPKGERGDPGFPGE
RGREGLKGEPGYPGNTGVHGLKGGPGDLGQEGPAGIPGNAGLRGTPGPPGPPGQPGAVGF
PGARGTAGPKGFHGFPGLNGLNGLPGTKGSPGTPGLSEAGLKGPAGLPGPKGEEGSPGLG
RGPLGFPGPKGSSGDMGPPGPVGLPGLPGTPGASVPSDIRGRPGDAGHPGTDGSSGLPGP
PGPQGPPGPASDQGDTGNPGFPGVPGLRGIKGDVGPTGPIGLPGASGFKGIRGEPGLMGM
PGKDGPPGDPGHPGLKGEMGRRGLPGRQGAPGITPQPEEITAPAGLPGLPGIDGVPGFDG
DHGFQGPAGKPGAKGLPGRSGLKGRDGLPGSPGIVGDPGPSGAPGPQGFEGVAGKPGAHG
LPGMPGRSVGVGYTLVKHSQSDQIPPCPVGMNKLWEGYSLLYVEGQEKAHNQDLGFAGSC
LPRFSTMPFIYCNINEVCYYASRNDKSYWLSTTAPIPMMPVDSAQIPQYISRCSVCEAPS
QAVAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIE
CNGARGTCHYFANKYSFWLTTVEQSQQFVSAPPSETLKAGQLRTRVSRCQVCMKNL
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
ggtggaaagaagtcttacaatgggccatgtggaggccgcgattgcagcgctggatgcaaa
tgttttccagagaagggttcacggggtcgaccaggaccaattgggcttcaaggaccaata
ggtgcacctggacttactggcccagaaggtttgccgggagcaaaaggtgagaaaggagca
gtgggcccccatggaccagctggacagaaaggcgaaaagggcccaatgggagttccagga
tttcaaggcatcaacgggatcccaggtcaccctggacaatctggacctagaggtctgcct
ggcctcgacggctgcaatggtaccattgggagtcctggtgtttctggatcagatgggttt
cctggcctacctgggctgcctggtcttcctggcccaaaaggccttaaaggagagcctgtt
tttgctcaaggtggtcttaaaggaatgaagggagaaaatggtcttcctggattggatgga
atttctggaccaaaaggttttccaggccctataggttctgcaggccctataggattgcca
ggtttgcagggtccaatgggtccccctgggccaccaggtccaaaaggtaacatgggatta
ggctttcaaggagagaaaggagaaaagggcgatgtagggctgcctggccctccaggtcca
ccaccatccactggaatactggaattcatgggatttccaaaagggaagcaaggagaaaag
ggtgagccaggccctcaaggattccctggagaaaaaggattgcctggcctgccgggcttt
ggaggtgttggagagaaaggagaaaaaggtgtacctggcttaccaggtggcaggggtctt
ttgggactggacggatctgctgggattccagggagaaagggtcatccaggtgttccaggc
tatccagggctggatggagtccaaggcgtgaagggtgaattaggtgacatcggtccccct
ggccctcctattgttattgacagggaaggtctagtcatttcaggtgccccaggtgaccct
ggaaacccaggagtacctggtcctccaggagatgatgggatcagcggtttaccaggcctt
ccaggagctccagggtttccaggcctggagagagatggaatgggccctggagggtctcca
ggaattccaggtgtgaagggtgaagtgggagaaccaggaagagcaacgattggattacca
ggcactcgcggcagagatggtttaccaggtttgccaggagcaccgggactgcctggttca
ccacgcccttcattcgccccagacacaatcctgaatggaaggactggggcgccaggggag
cctggacaaagagggctgccaggagctttgggtccaaaagggtacaaaggagaggcaggt
gattgtgcttgtgatggaggagttacaagagctggtctaaaaggcatctcaggtctacca
ggtccgtcgggaagccctggtgtgcctgggattaagggcattggtggagacccaggcact
gtgggtgcaccaggactacgaggccctccggctttggctggtcagcaaggtcttgcaggc
cttaagggcgaaaaaggggattcatcctatgcaacaggcagaggtgctcgtggggaccga
ggtgcgacagcacccagaggaccttcaggcatcccgggaacccctggcagggatggcctt
ccaggcttgccaggcccaccgggccctccaggtgacggtggcctaggtttcccaggtgaa
aaaggactgccaggactacctggctccaagggccatcgtggagaaactggttctcctggt
gttgggtatccaggtcctagtggagttcgtgggccaccaggtgacccaggaatggatggg
tttccaggacaagcaggtcttccaggccctccaggtatcaccttgccctgcatagttcct
ggagcatatgggcccccagggactcccggctttccaggattgccaggtcccaaaggcagc
aaaggctttcctggtattccaggccaacctgggttacacgggtcaaaaggacagccaggg
tctccaggaataataggcttacaaggggaacctggctttcctgggcctcgaggagagcaa
gggtcacaaggacttccaggactggatggaacagatggtttgcctgggaaaatgggtgct
gcaggcttagctggaacaaaaggatctcctggagaggtatttggagctgagagtggagcc
ctgggagagcgtggccgacctggactcccaggtgataaagggcttacaggtgatcttgga
tttccaggaccgaaagggttagacggaagaccaggcctcctaggcattaaaggagaacag
ggagatccaggatattcgggtgtccctggattgcagggacctcctggtcctggaggtcct
tttggcattaagggaaaaccaggacccgtggggtcagttggccttgcaggagcaccaggc
tgtcaaggacttcctggagtcaaaggcttgacgggggacgtaggtccacaaggccctgct
ggtatgaaaggcttcccaggtcttgatggtgctccaggatctcctggggaaagaggattc
ttagggccacctgggccttttggtcaagatggacgtccaggtttctctgggccaaaaggc
gagaaagggtcttctggcctgcttggtttccctggcatgccaggcctgcctggtgtccct
ggggtgaatgggtttaaaggagctcctggcacagctggaggaaaggggagccctggaatt
gtgggactccaaggtcaaaaaggtgacaggggtgatgtaggtccacctggtcttcctgtt
cttgggcctccagaacaggcactgcaattgaaaggagacaaaggagatccaggattagct
gggcttggaggatttcctggacctagaggtgataaaggaatctcaggaagccgtgggcag
cctggtctccctggtccaatggggtcagcaagcaaagagagaggtcttcacggtgaccca
ggcttccctggtccccccggccagcctgggctgccaggacagaagggtacacatggtatc
ataggatttccaggaagagggtaaataccttcttaaggttcagatggtatcacaggaaca
cttggattcccaggaactattggcctccctggtccaaagggtgaccagggagagtctgtt
ggcattaaaaaaattgctggaccaaaaggagagcgaggggacccagggttcccaggagag
agagggagagaaggactcaagggtgaaccaggatacccaggaaacactggggtgcacgga
ctcaaaggtggcccaggagatcttggccaagaaggcccagcaggaatccctggaaatgct
gggctgagaggaacccctgggccaccaggacctccagggcagccaggagctgtcggattc
cctggagctcgtggaacagcaggacctaaagggtttcatggatttccgggtttaaatggt
ctgaatggcttgccaggcacaaaagggtctcctggaacaccagggctgagtgaagctgga
ctgaaaggccctgcaggtctcccaggtccaaagggtgaagaaggttctccaggcttgggc
agaggacctctaggattccctggaccaaaaggctcatcaggagacatgggtccccctggt
cctgtgggactgcctggcttgccaggaacacctggagcttctgttccttctgatatacgt
ggaagacctggggatgctggccatccaggaactgatgggagctcaggtcttccaggtcct
ccaggaccacaagggccccctggcccagcttctgaccaaggtgacacaggcaatccaggt
ttccctggggttcctggcttgcgaggcattaagggtgatgtgggacccactggtccaatt
ggactccctggagcatctggattcaaaggtataagaggggagcctggccttatggggatg
ccgggtaaagacgggcctccgggggatcctggtcaccctgggctgaaaggagaaatgggc
cgtcgaggtctccctggccgccaaggggctccaggcataaccccccagccagaagaaatc
acagcccctgcaggcttacctgggctgccaggaattgacggggtccctggctttgacgga
gatcatggattccagggcccggctggaaaaccaggtgcaaaaggtctgccaggaagatct
ggcttgaaaggacgtgatggtttacctgggtcacctggcatagttggggatccaggacct
tcgggtgccccaggaccacaaggatttgaaggtgttgctggaaagccgggtgcacatggt
ttgccgggaatgcctggtcggagcgtgggcgttggatacactttagtgaagcacagtcag
tcggaccaaatcccaccttgtcccgtaggaatgaacaagctctgggagggctacagcttg
ttgtacgtggaggggcaggaaaaagcacacaaccaggatcttggttttgctggctcgtgt
ttgcctcgcttcagcaccatgcctttcatttactgcaacatcaacgaagtgtgctactat
gccagccggaacgacaagtcctactggctctccaccactgcccccatccccatgatgccg
gtggacagcgctcagatcccacagtacatcagccgctgctccgtctgcgaagcgccttcc
caggcggtggctgtgcacagccaggacatcaccatcccgcagtgtcccctgggctggcgc
agcctgtggataggatactccttccttatgcacactgcggccggagcagaaggcggaggt
cagtccctcgtctcacctggctcctgcctggaggatttccgtgctacgccgttcatcgag
tgcaacggtgccaggggaacgtgccattactttgcaaacaaatacagcttctggctgacc
accgtggaacagtcgcagcagtttgtcagtgctcctccctcggaaactctgaaagcagga
cagcttcgaacaagggtcagccggtgccaagtgtgcatgaagaacttgtag
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integrated database retrieval system
