Pterocles gutturalis (yellow-throated sandgrouse): 104468850
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Entry
104468850 CDS
T08540
Symbol
COL27A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XXVII) chain
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
pguu
Pterocles gutturalis (yellow-throated sandgrouse)
Pathway
pguu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pguu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104468850 (COL27A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pguu00536
]
104468850 (COL27A1)
Glycosaminoglycan binding proteins [BR:
pguu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104468850 (COL27A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
GH131_N
Motif
Other DBs
NCBI-GeneID:
104468850
NCBI-ProteinID:
XP_010081419
LinkDB
All DBs
Position
Unknown
AA seq
1725 aa
AA seq
DB search
GFCFLWTVLCFTWFLGFTQGNSEDVDVLQRLGLSGKRPSSGWSSSRTVPQGVIPFKSGVI
FTQRARVEAPVSTILPTGASTDLLLVLSLCSHRINNAFLFAVKSKKKKLQLGVQFVPGKI
VVYVGHKRSVYFDYNVHDGQWHNMAINIRGQTVTLFTSCGKRRVHADLHFKKDEALDPHG
SFLFGKMNQHSVQFEGAICQFDIYPSAKAAHHYCKYLKKQCRQADTYRPNLPPLIPLLPR
DPSASPSTPQRMEPSLQGLKNLTTAGPSLEFGRVTVPPKARGSGATTITLVPSLPRLTTK
APKVMVAPSPVLSSTETQPPTPSLAQGTVTTLRVSRPTPGTRLEKTPLPPAKKALPTSQS
PATASRKESKQETKKKINQKPTVEPSAAPSTVKPMRRMTDNTTSNVHFVTLKPTLQNPSH
GPVPKKHVPSPTRKADPSNVALVYTKPPLGSARPASRARTQVFNLTTPAATDGYQIFDPL
GPTPFPLLLGYPGLKGERGPQGPPGLPGLPGPPGKRGSRGPPGPHGNPGLPGPPGPKGQK
GDPGLSPGKARNGPKGDVGXPGLTGFPGPPGRKGYKGYPGPPGHPGDQGERGPDGSPGAK
GYPGRQGLPGPIGEAGPKGSRGYIGLPGLFGLPGADGERGIPGVPGKRGKMGRPGFPGDF
GERGPPGIDGNPGELGAPGPPGVLGLIGDMGSVGPIGYPGPKGLKGLMGNPGEHGLKGDK
GDQGAAGVPGDIGFQGDKGSQGLPGVPGARGKAGPLGKVGDKGPVGFPGPPGPEGFPGDI
GPPGENGPEGLKGKPGARGLPGPRGLPGQEGDEGPLGPPGVPGPEGRSGRKGFPGRPGPD
GSKGEPGNRGRPGKVGEQGLMGFIGPIGEPGIVGEKGDRGTVGPPGPPGVKGSMGHPGTP
GGVGFPGIPGPTGPAGVRGVPGIRGMKGRRGAIGPDGPVGEPGSRGVKGRPGEPGKLGPD
GLQGKMGETGETGARGFPGIQGPSGPPGAKGAPGDPGPQGPQGPPGPLGEMGHKGPPGSM
GQPGLAGEPGMKGDPGQLGVPGEQGLVGQRGESGLEGDSGPPGPDGVKGDKGEQGLEGEK
GEKGNEGLKGKEGPPGYPGITGVRGPEGKPGKQGEKGKPGQKGSKGYQGQLGETGSPGKE
GPKGNQGPKGSRGTLGPMGAPGRMGAQGEPGLKGYQGHAGPPGPIGPPGPKGEKGEQGDD
GKVEGPQGPPGDRGPVGDRGDRGEPGDPGYPGQEGLDGERGKPGQQGLPGDPGPPGQPGA
KGSKGDVGQKGKQGARGSAGSRGSPGILGLPGPRGVVGRQGQEGAPGVDGVPGKDGVPGM
LGEQGDDGEEGVTGMSGKRGNPGIPGLPGAQGPPGFKGERGLPGQTGQTGKRGSSGGTGL
PGSPGDPGPKGQPGDFGEAGFPGIAGMFGPKGPPGDLGFKGIQGPRGPPGLMGKEGIIGP
LGIQGPMGSPGPKGDKGSRGERGLQGPRGPPGPQGHPGPPGPPGIPASFQQDGFGAAFRT
LIDSTAALKTEGYHHPDLLMLDHGGEIFKTLHYLSNLIQSIKRPLGTKENPARICRDLMN
CEQKMNDGTYWIDPNLGCSSDTIQVICNFTNGGQTCLSPITVSKLDFDIGRVQMNFLRLL
SSEVVQHITIHCLNTSVWREGSSEKPSEKALRFRAWNGQMFEADGQLRPEVAADDCKIKD
GRWHRTLFSFRTQDPQQLPIVNIDNLPPSEPGKQYHLEVGPVCFL
NT seq
5179 nt
NT seq
+upstream
nt +downstream
nt
gggattctgctttctctggactgtattatgttttacctggttcctgggattcacacaggg
aaattctgaagatgtggatgttcttcaaagactgggcctgtcagggaaaaggccatcgag
cggatggtcctcatcacgtacagttcctcaaggggtcattcctttcaaatcaggggtcat
cttcactcagcgagcacgcgtcgaagcaccagtcagcaccatcctccccacgggcgccag
caccgacctgctcctagtgctgagcctctgctcccaccgcatcaacaatgcttttctctt
tgctgtcaagagcaaaaagaaaaaactgcagctgggggtccagtttgtgcctgggaagat
cgtagtttatgtgggccacaagcgctctgtatattttgattacaatgtccatgatggcca
gtggcacaatatggccatcaatatccgtggccagacagtcactttatttacttcttgtgg
gaagcgcagagtacatgcggatttgcattttaaaaaggacgaggcgttggatccacatgg
gtctttcctctttgggaagatgaaccagcactccgtgcagtttgaaggagccatctgcca
gttcgatatttatccttccgccaaggcagctcatcattactgtaaatacctgaaaaaaca
gtgcaggcaagcagatacctaccggccaaacctgccccccctcatccccctcctgcccag
ggatcccagtgcctccccgagtaccccacagcgtatggagccctcgctgcagggtctgaa
aaacctgaccactgccggcccatccttggagtttggcagggtcactgtaccccccaaggc
tcggggttcaggtgcaacaaccatcacgttggtaccgtcactgccaagactgacaaccaa
agccccaaaggtcatggtggcaccgtctcctgttctatcgagtactgaaacgcagccacc
caccccttcgctcgctcaggggacggtgacaaccctcagggtgtctcggcccactcctgg
cacgcgtctggagaaaactccccttccccctgccaaaaaggctctaccaacgagccagag
ccctgccacagccagcaggaaggagtccaagcaagagaccaaaaagaagatcaaccaaaa
accgaccgttgagccctctgcagcccccagtactgtaaagccaatgaggaggatgactga
taacacaaccagcaacgtccactttgtcaccctaaagccaaccctgcagaacccaagcca
tgggcccgttccaaagaagcacgtgccgtcccccaccaggaaagcggatcccagtaacgt
cgctctggtgtacaccaaaccccccctggggtctgcccgccccgcctccagagccaggac
acaggtcttcaacctcaccaccccagccgcgaccgatggctatcaaatctttgaccccct
cggacctactccatttccattgttactgggatatccaggcttgaaaggagagagaggacc
ccagggtccaccaggtctgccgggcttaccaggaccacctggcaagagaggttccagagg
tcccccaggtccccacggaaaccctggcttacctggccccccaggcccaaaaggtcagaa
aggtgatcctgggctgtctcccggaaaagctcgcaacggaccgaagggagacgtgggcta
acctgggttgactgggttccctggaccacctggtagaaagggctataaaggctacccggg
accaccaggtcatcctggagaccagggcgaacgaggaccagatggaagtccaggtgccaa
aggttatcctggcaggcagggtttacctggccccataggggaagctggtccaaaaggcag
ccggggatatattggtctcccaggattatttgggctaccaggggctgatggagaacgagg
gatccctggcgttcctgggaagaggggcaagatgggtaggccgggttttcctggtgattt
tggagaacgaggacctccaggcatcgatgggaacccaggagaattgggagccccaggtcc
tcctggagtccttggactcattggtgacatgggctctgtcggaccgataggctatccagg
accaaaaggcttaaaggggctgatgggaaaccctggagaacatggactgaaaggtgataa
gggtgatcagggagcagcaggtgttccaggagatatcggcttccaaggagacaagggcag
ccagggtttgcctggggtccctggggcacgaggaaaggcaggacccctgggaaaagttgg
tgacaaaggtcccgttgggtttccaggaccacctggccctgagggcttccccggtgacat
tggccctccaggagagaacggtcccgaaggcctgaagggcaagccaggagcacgaggttt
acctgggccgagaggactgcccggacaggagggagatgaaggacccttaggaccaccagg
agtccctggtccggagggtcgatctggccggaagggatttccaggaagacctggtcccga
tggttcaaagggtgagccaggaaaccgcggccggccagggaaagttggtgagcagggtct
aatgggtttcattggtcccataggggagcctggaatagtgggagaaaagggcgatcgggg
cacagtgggacccccaggccctccaggagtcaaggggtcgatggggcaccccgggacacc
aggaggagtgggttttcctgggatccctggaccaacaggtccggcaggagtccgtggtgt
gccagggatcagagggatgaaaggccgcaggggtgccatagggcctgatggaccagtagg
cgagccggggtcacggggtgtcaagggccgaccaggggagccaggcaagctggggccaga
tgggctgcaggggaagatgggtgagactggggagacaggagcacgcggcttccccggtat
ccaaggaccttctggacctccaggagcaaaaggggctccaggcgacccgggtccacaagg
accacaggggccacctgggcctttgggagaaatggggcataagggacctcctggctcgat
gggacaacctggcctcgcaggtgaacctggcatgaagggcgatcctggccagctgggggt
ccccggagagcaaggcctcgttggccaaaggggagaatcagggctggaaggggacagcgg
gccacccgggccggacggtgtcaagggagacaaaggagagcaaggcctggaaggagagaa
aggagaaaaagggaacgaaggactgaagggaaaagaagggcctcctggatatcccggcat
cacaggtgtccgaggaccagaagggaaaccaggaaaacagggggaaaagggcaagcctgg
ccagaagggcagcaagggctaccaggggcagctcggcgagacaggatctccagggaagga
ggggccgaaggggaaccaaggccctaaaggatcccgaggtaccctgggacctatgggtgc
tccgggaaggatgggtgctcagggggagcctggcttaaagggttaccagggacacgcagg
accaccagggccgattggaccaccagggccaaagggggaaaagggagaacaaggcgatga
tgggaaggtcgaaggcccacagggaccacccggagacagaggccctgttggtgacagagg
tgatcgaggggagcctggagaccccggttatcctggtcaagaagggctcgatggagaaag
aggaaaacctggacagcaaggcttacctggggatcctggaccaccaggccagccaggagc
aaagggatccaaaggtgatgtgggtcaaaaaggaaagcaaggagcacggggcagtgcagg
gagcagaggctcaccgggcatccttgggctaccgggtcctcgaggagtggtaggaaggca
gggacaagagggtgcccctggagtggacggagtgcctgggaaggatggtgtgcctggcat
gctgggagagcaaggtgatgatggggaagaaggcgtgacagggatgtcaggcaaaagagg
gaaccctggcataccaggactccccggggcgcagggaccgccaggattcaagggtgaaag
aggattgcctggacagactggccaaacagggaagcgaggatcgtcgggaggaacgggcct
tccagggagccccggcgacccgggacccaaaggacagccgggagactttggcgaggcagg
atttccagggatcgcgggcatgtttgggccaaagggccccccaggagacctcggcttcaa
aggcattcagggaccccgtgggccgcccggtctcatgggaaaagaaggaattattggtcc
gcttggcattcagggtcccatgggaagccccgggcccaagggagacaaaggcagccgtgg
agaaaggggtctgcaaggtccaaggggtcctccaggcccacaaggacaccctggccctcc
gggaccaccaggaattccagcctcatttcaacaagacggctttggggcagctttccgaac
gttaatcgactcgacggccgcgctcaagacagagggttaccatcatccagaccttctcat
gctggaccacggaggggagatctttaagactctacactacctcagcaacctcattcagag
catcaaaagacccctgggaaccaaggagaaccctgcacgcatctgtcgagacctcatgaa
ctgtgaacagaagatgaacgatggtacctactggattgacccgaaccttggctgttcctc
ggacaccatccaggtcatctgtaacttcaccaacggtggccagacgtgtctcagccccat
cactgtctccaagctggatttcgacatcggcagagtccagatgaacttcctccgtctgct
gagctccgaggtggtgcagcacatcaccatccactgcctcaacacctccgtctggcggga
gggctcctccgagaaaccttcggaaaaagccctgcgcttccgagcctggaacggacagat
gttcgaggccgacgggcagctcaggccagaggtggcagctgatgattgcaagatcaagga
tggacgctggcatcggactctcttctcgtttcggacgcaggaccctcagcagctgccgat
tgtcaacatcgacaaccttcccccatccgagccaggaaagcagtaccacctcgaggtcgg
ccccgtgtgcttcctttga
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integrated database retrieval system
