Polymorphum gilvum: SL003B_0004
Help
Entry
SL003B_0004 CDS
T01458
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pgv
Polymorphum gilvum
Brite
KEGG Orthology (KO) [BR:
pgv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgv03032
]
SL003B_0004 (gyrB)
03400 DNA repair and recombination proteins [BR:
pgv03400
]
SL003B_0004 (gyrB)
Enzymes [BR:
pgv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SL003B_0004 (gyrB)
DNA replication proteins [BR:
pgv03032
]
Prokaryotic type
DNA Topoisomerases
SL003B_0004 (gyrB)
DNA repair and recombination proteins [BR:
pgv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SL003B_0004 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
GyrB_hook
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ADZ68443
UniProt:
F2IXP5
LinkDB
All DBs
Position
4271..6724
Genome browser
AA seq
817 aa
AA seq
DB search
MTDTSLPDNTPPAGAADPQDYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVV
DNAIDEALAGHADRVTVTLNADGSVTVTDNGRGIPTDVHATEGVSAAEVIMTQLHAGGKF
DQNSYKVSGGLHGVGVSVVNALSTWLELRIWRAGKEHFIRFRHGDAEAPLVEVGPSNGRK
GTEVTFLPSPETFTRIEFDFATLEHRLRELAFLNSGVRILLTDRRGVEEKAVELFYEGGL
EAFVRYLDRAKHPLVEAPITVGAERDGITVEAALWWNDSYHEQVLCFTNNIPQRDGGTHL
AGFRAALTRQVTGYADSSGLLKKEKVSLTGDDCREGLTCVLSVKVPDPKFSSQTKDKLVS
SEVRPVVENVINQALAEWLEENPARARAVVSKVVEAASAREAARKARELTRRKGALDIAS
LPGKLADCQERDPAKAELFLVEGDSAGGSAKQGRHRENQAVLPLRGKILNVERARFDKML
SSNEIGTLITALGTGIGKEEFNLDKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPELI
ERGHIYIAQPPLYKVKRGQSEQYLKDQTALEDYLIGQGLEDTSLTLASGEVRMGADLRSV
VETARSINAIFDGLHSRYDRAVVEQAAIAGALNPETLHDAAKAAEAAAYIARRLDILADE
FERGWTGEARDDGSLVFRRTVRGVEEVATIDAALLASADARRLDAQAKHLQEIYGKAASL
RRKDSETAIRGPQALLATVFAFGRKGISLQRYKGLGEMNPEQLWETTLDPNVRSLLQVKV
KEADDADDIFTKLMGDEVEPRREFIQDNALSVANLDV
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacacttcgcttcccgacaacactccgcccgccggcgcggccgatccccaggac
tacggcgccgactcgatcaaggtcctcaagggcctggatgcggtgcgcaagcggccgggc
atgtacatcggcgacaccgacgacggctccggcctgcaccacatggtctacgaggtggtc
gacaacgccatcgacgaggctctggccggccatgccgaccgtgtcaccgtgacgcttaac
gccgacggttcggtgaccgtgaccgacaacggccgcggcatcccgaccgacgtgcatgcg
acggagggcgtgtcggcggccgaggtcatcatgacccagctgcatgccggcggcaagttc
gaccagaactcctacaaggtctccggcggcctgcacggcgttggcgtatcggtggtcaac
gcgctttcaacctggctggaactgcgcatctggcgcgccggcaaggagcatttcatccgc
ttccgccatggcgacgcggaagcccccctggtcgaggtcggcccctcgaacgggcgcaag
ggaaccgaggtcaccttcctgccctcgccggagaccttcacccgcatcgagttcgacttc
gccaccctggaacaccgcctgcgcgagctggccttcctcaattccggcgtgcgtatcctg
ctgaccgacaggcgcggggtggaggaaaaggccgtcgagctgttctacgaaggtggtctc
gaggccttcgtgcgctatctcgaccgggccaagcacccgctggtcgaggcgcccatcacc
gtcggcgccgaacgtgacggcatcaccgtcgaggcggcgctgtggtggaatgacagctac
cacgagcaggtgctgtgcttcaccaacaacatcccgcagcgcgacggcggtacccatctg
gccggcttccgcgccgccctgacccgccaggtgaccggctatgccgacagctccggcctg
ctgaagaaggaaaaggtgtcgctgaccggcgacgactgccgcgagggcctgacctgcgtc
ctgtcggtgaaggtgcccgacccgaaattctcgtcgcagaccaaggacaagctggtgtcc
tcggaagtgcgcccggtggtcgagaacgtcatcaaccaggcgctcgccgagtggctggaa
gagaacccggcgcgcgccagggctgtcgtgtccaaggtggtcgaggcggcgtccgcccgc
gaggcggcgcgcaaggcgcgcgaactgacccgccgcaagggcgcgctcgacatcgcctcc
ctgcccggcaagctggccgactgccaggagcgcgacccggccaaggccgagctgttcctg
gtcgagggcgactcggccggcggctccgccaagcagggccgccaccgcgagaaccaggcc
gtccttccgctgcgcggcaagatcctcaacgtcgaacgcgcacgcttcgacaagatgctg
tcttccaacgagatcggtacgctgatcaccgcgctcggcacaggcatcggcaaggaggag
ttcaacctcgacaagctgcgctaccacaagatcatcatcatgacggacgcggacgtcgac
ggagcgcatatccgcacgctgctgttgaccttcttcttccgccagatgcccgagttgatc
gagcgcggccacatctacattgcccagccgccactctacaaggtcaagcgtggccagtcc
gaacagtacctgaaggaccagacggcgctggaggactatctcatcggccagggtctggag
gatacctcgctcaccctcgccagcggcgaggtgcggatgggcgcggacctgcgcagcgtg
gtcgagacggcgcgcagcatcaacgccatcttcgacggtctgcattcgcgctacgaccgg
gcggtcgtcgaacaggcggcgatcgccggggcgctcaatcccgagacgctgcatgatgcc
gccaaggcggcggaagcggccgcctacatcgcccgccgcctcgacatcctggccgacgag
ttcgagcgcggctggaccggcgaggcgcgcgacgacggcagcctggtcttccggcgcacc
gtgcgcggcgtcgaggaagtggcgaccatcgatgccgccctactcgcgtccgccgacgcg
cgccggctcgacgcccaagctaagcatctgcaggagatctatggcaaggccgcgagcctg
cgtcgaaaggacagcgaaaccgccatccgcggcccgcaggccctgctcgccacggtgttc
gcctttggtcgcaaaggcatcagcctgcagcgctacaagggcctcggcgagatgaacccc
gagcagctgtgggagaccaccctggatccgaacgtccgctcgctgctgcaggtgaaggtc
aaggaggcagacgacgccgacgacatcttcaccaagctgatgggcgacgaggtcgagccg
cggcgcgaattcatccaggacaacgcgctcagcgtcgccaacctcgacgtgtga
DBGET
integrated database retrieval system
