Polymorphum gilvum: SL003B_0052
Help
Entry
SL003B_0052 CDS
T01458
Symbol
trpB
Name
(GenBank) Tryptophan synthase, beta subunit
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
pgv
Polymorphum gilvum
Pathway
pgv00260
Glycine, serine and threonine metabolism
pgv00400
Phenylalanine, tyrosine and tryptophan biosynthesis
pgv01100
Metabolic pathways
pgv01110
Biosynthesis of secondary metabolites
pgv01230
Biosynthesis of amino acids
Module
pgv_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
pgv00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SL003B_0052 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
SL003B_0052 (trpB)
Enzymes [BR:
pgv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
SL003B_0052 (trpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
ADZ68491
UniProt:
F2IYH8
LinkDB
All DBs
Position
complement(55812..57056)
Genome browser
AA seq
414 aa
AA seq
DB search
MTTIANTLRSGPDARGHFGIYGGRYVAETLMPLILDLEQAYADAKADPAFRAELDDLNTH
YTGRPSPLYFAERLTEHLREVSEASGLGGGAKIYFKRDELNHTGSHKINNCLGQILLAKR
MGKTRIIAETGAGQHGVATATVCARFGLPCVVYMGATDVERQKPNVFRMKLLGAEIVPVT
AGAGTLKDAMNEALRDWVTNVDSTYYLIGTAAGPHPYPELVRDFQSVIGQEVREQMLAAE
GRLPDALVAAVGGGSNAIGLFHPFLDDASVAIYGVEAGGKGLDGHEHCASLNAGRPGVLH
GNRTYLLQDGDGQILEGHSISAGLDYPGIGPEHAWLKDTGRVTYVPATDDEALAAFQMLT
RVEGIIPALEPAHALAQVIKLAPTMDRDKIIVMNLCGRGDKDVFTVGKILGFDL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttgacgaccatcgcgaacaccctgcggtcgggtcccgacgcacgcggccatttcggcatc
tatggcggccgctacgtggccgagaccctgatgccgctgatcctcgacctcgagcaggcc
tatgccgacgccaaggccgatccggcgttccgcgccgagctggacgacctcaacacccat
tacaccggccggccctcgccgctctatttcgccgagcggctgacggagcatcttcgtgag
gtttctgaggcctccggcctcgggggcggcgcgaagatctacttcaagcgcgacgaactc
aaccacaccggcagccacaagatcaacaactgcctcggccagatcctcctggccaagcgc
atgggcaagacgcgcatcatcgccgagaccggcgccggacagcacggcgtcgccaccgcc
accgtctgcgcccgcttcggcctgccctgcgtggtctacatgggcgccaccgacgtcgag
cggcaaaagcccaacgtgttccgcatgaaactgctcggcgccgagatcgtgccggtcacc
gccggcgccggcacgctcaaggatgccatgaacgaggccctgcgcgactgggtcaccaac
gtcgacagcacctattatctcatcggcaccgccgccggcccgcacccctatccggaactg
gtgcgcgacttccagtcggtcatcggccaggaggtgcgcgagcagatgctggcggccgag
ggccgcctgccggatgcgctggtcgccgccgtcggcggcggctccaacgccatcggcctg
ttccatcccttcctcgacgacgcctcggtggcgatctacggcgtcgaggccggcggcaag
ggtctcgacggccacgagcactgcgcctcgctcaacgccggccggcccggcgtgctgcac
ggcaaccgcacctacctgctgcaggacggcgacggccagatcctcgagggccactcgatc
tcagccggcctcgactatcccggcatcggcccggagcatgcctggctgaaggacaccggc
cgcgtcacctacgtgccggcgaccgacgacgaggcgctcgccgccttccagatgctgacc
cgcgtcgagggcatcatcccggcgctggagccggcccatgcgctcgcccaggtcatcaag
ctggcgccgaccatggacagggacaagatcatcgtcatgaacctgtgcggtcgcggcgac
aaggacgtcttcaccgtcggcaagatcctcggcttcgatctctga
DBGET
integrated database retrieval system
