Polymorphum gilvum: SL003B_0076
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Entry
SL003B_0076 CDS
T01458
Symbol
trmE
Name
(GenBank) tRNA modification GTPase mnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pgv
Polymorphum gilvum
Brite
KEGG Orthology (KO) [BR:
pgv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgv03016
]
SL003B_0076 (trmE)
Transfer RNA biogenesis [BR:
pgv03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SL003B_0076 (trmE)
Prokaryotic type
Methyltransferases
SL003B_0076 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
Dynamin_N
FeoB_N
AAA_28
RsgA_GTPase
ABC_tran
AIG1
Motif
Other DBs
NCBI-ProteinID:
ADZ68515
UniProt:
F2IYK2
LinkDB
All DBs
Position
80962..82314
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AA seq
450 aa
AA seq
DB search
MTDTIYALSSGPVPAGVAVIRVSGPLTVEIVRKLSGKAPTPRRIALGLLRRPDTGEAIDQ
AVVLFFKGPSSFTGEDVAEFQCHGGRAVVAAVLECLAAFPGTRPAEAGEFTRRAFDNGRM
DLTEVEGLADLIAAETEAQRRQAFRQMEGWLGRLYDGWRGRLVQMRAMIEADFDFADEED
VPGSVADGVWDAAAGLLRDIDAHLEQSGRGERLRQGLQVVLMGAPNAGKSSLLNALAGRD
VAIVTEEAGTTRDVIEVHLDLDGYPVTLADTAGLRAEAGRVEREGIRRATERGRGADLIL
WAAEPGGPLPEDPLEGLPEAVRAAGVPVWMLRTKTDLVTPPERDSSEMSLVIPVSTQTGM
GIKSLLDRLSCFATETLSLGEAPLATRQRHRFHLAACRDALAAAVASRGLPAELRAEDLR
RAADALGRITGRIDVEDLLDVIFREFCIGK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgacggacacgatttatgctttgtcgagtggcccggtcccggccggcgtcgcggtcatc
cgggtctccggtcctttgactgttgagattgtccggaaactgtccggaaaggctcctaca
ccccggcggatcgcgcttggcctgctgcggcgaccggataccggcgaggcgatcgaccag
gcggtcgtgctgttcttcaagggaccgtccagcttcaccggcgaggacgtcgccgagttc
cagtgccacggcggcagggcggtggtggcggcggtgctggagtgccttgcagcctttccc
ggcacgcgaccggcggaggcgggcgagttcacccggcgggccttcgacaacggccggatg
gacctgacagaggtcgagggcctcgccgacctgatcgcggcggagactgaggcacagcgg
cgccaggccttccggcagatggagggttggcttggccggctctacgacggctggcggggg
cgcctcgtccagatgcgggcgatgatcgaggcggatttcgatttcgccgacgaggaggac
gtgccgggttctgttgcggatggcgtgtgggacgcggcggcggggctgcttcgggacatc
gacgcccatctggagcagtcggggcgcggcgaacggttgcgtcagggcctgcaggtggtc
ctgatgggtgcgcctaacgccggcaagtccagcctgctcaacgcgctcgccggacgggat
gtcgccatcgtcaccgaggaggcgggcacgacgcgggacgtgatcgaggtgcatctcgac
ctcgacggctatccggtgacgctcgccgacacggcgggcctgcgcgcggaggcgggccgt
gtcgagcgggagggtattcggcgggcgacggagcggggccggggcgccgacctgatcctg
tgggccgcagagccgggcggaccattgcccgaagatccgctggaggggctcccggaggcc
gtgcgcgcggcaggggttcccgtatggatgttgcggaccaagaccgatctcgtgactcct
ccggaacgagactcttccgaaatgagccttgtaattcctgtttcgacccaaacggggatg
ggcattaagagccttctagaccggctttcctgtttcgcgactgaaacgctttcactcggg
gaggcgcccctggcgacgcgacagcggcaccgctttcacctggctgcctgtcgggatgcg
cttgcggcggcggtggcgagtcggggcctgccggcggagttgagagccgaggacctgcgc
cgggcggccgacgcgctcggccggatcaccggccgcatcgacgtcgaggatctgctcgac
gtcatcttccgcgagttctgcatcggaaagtag
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