KEGG   Polymorphum gilvum: SL003B_0125
Entry
SL003B_0125       CDS       T01458                                 
Name
(GenBank) Diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pgv  Polymorphum gilvum
Pathway
pgv00300  Lysine biosynthesis
pgv00470  D-Amino acid metabolism
pgv01100  Metabolic pathways
pgv01110  Biosynthesis of secondary metabolites
pgv01120  Microbial metabolism in diverse environments
pgv01230  Biosynthesis of amino acids
Module
pgv_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pgv00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SL003B_0125
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SL003B_0125
Enzymes [BR:pgv01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     SL003B_0125
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N PPR_long
Other DBs
NCBI-ProteinID: ADZ68564
UniProt: F2IZE1
LinkDB
Position
129271..130545
AA seq 424 aa
MHHFDYRDGALFAEDVPVAAIAEAVGTPFYCYSTATLTRHYEVFSSAFEGIPSLVCYAMK
ANSNQAVLATLARLGAGMDVVSEGELRRARAAGVPADRIMFSGVGKTEAEQALAIDEDIL
CFNVESEPELVQLSRVATEKGRTARVSLRINPDVDARTHKKISTGKAENKFGIPWQRARA
LYAEAGELPGIEVTGLDMHIGSQITELEPFDAAFARLGDLVRDLRGDGHHIEHIDLGGGL
GIPYVTDNAPPPHPVEYAAVVKKHVDKLGCRIIFEPGRLIAGNAGILVTRVIYVKEGHDK
TFVIVDAAMNDLIRPTLYDAYHEVRPVRAAPADARRIRADVVGPVCETGDFLAHDRDIPE
VGQGDMLAVFSAGAYGAVQAGTYNSRLLIPEVLVNEGEFAVVRPRPSYDDLIGLDRLPSW
LAEA
NT seq 1275 nt   +upstreamnt  +downstreamnt
gtgcatcacttcgactacagggacggcgccctcttcgccgaagatgtgccggtcgccgcc
atcgcggaagccgtcgggacgccgttctactgctattcgaccgcgacgctgacgcgtcac
tacgaggtgttttcctccgccttcgagggcattccgtcattggtctgctatgccatgaag
gcgaactcgaaccaggccgtgctggcgacgctggcccgactcggcgccggcatggacgtc
gtctcggaaggcgagttgcgccgggctcgcgccgccggcgtgccggccgaccggatcatg
ttctccggcgtgggcaagaccgaggccgagcaggcgctggcgatcgacgaggacatcctg
tgcttcaacgtggagtccgaacccgaactcgtccagctgtcgcgggtcgccacggaaaag
gggagaacggcgcgggtgtcgctgcgcatcaaccccgacgtcgatgccaggactcacaag
aagatctcgacgggcaaggcggagaacaagttcggcattccctggcagcgcgcgcgcgcg
ctctatgcggaggcaggagaactgccgggcatcgaggtcaccggcctcgacatgcacatc
ggctcgcagatcaccgaactcgagcccttcgatgccgccttcgcgcggctcggcgacctg
gtccgcgatctgcgcggcgacggtcaccacatagagcacatcgatctcggcggcggtctc
ggtattccctatgtcaccgacaacgcaccgccgccgcatccggtcgaatatgccgccgtc
gtcaagaagcacgtcgacaagctgggttgccggatcatcttcgagccgggccggctgatc
gccggcaatgcgggcatcctggtcaccagggtgatctacgtgaaggaaggtcacgacaag
accttcgtgatcgtcgacgcggcgatgaacgacctgatccgaccgaccctctacgacgcc
taccacgaggtgcggccggtgcgggcggcacccgccgatgcacgccgaatcagggccgac
gtggtcggccccgtgtgcgagaccggcgacttcctcgcccacgaccgcgacattccggag
gtcggccagggagacatgctcgccgtgttttccgccggcgcctatggcgcggtccaggcc
ggaacctacaattcccgcctgctgatccccgaagtgctggtcaacgaaggcgaattcgcc
gtggtgcggccgcggccgagctacgacgacctgatcggcctcgaccgcctgccgtcctgg
ctcgccgaagcgtga

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