Polymorphum gilvum: SL003B_0158
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Entry
SL003B_0158 CDS
T01458
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pgv
Polymorphum gilvum
Pathway
pgv00300
Lysine biosynthesis
pgv00470
D-Amino acid metabolism
pgv01100
Metabolic pathways
pgv01110
Biosynthesis of secondary metabolites
pgv01120
Microbial metabolism in diverse environments
pgv01230
Biosynthesis of amino acids
Module
pgv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pgv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SL003B_0158
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SL003B_0158
Enzymes [BR:
pgv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SL003B_0158
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
ADZ68597
UniProt:
F2IZH4
LinkDB
All DBs
Position
167216..168130
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AA seq
304 aa
AA seq
DB search
MASARRPFLKMNGLGNDFVVWDARAEALSLSPETIAALGNRSTGIGFDQMITVECSPAGA
DAFMRIHNCDGSQVSACGNATRCVGRLLMEESGRPDANIETRAGLLVARATGDPRVVTVD
MGVPRLRWDEIPLAEEFADTRAIELQIGPIDAPILHTPAVVNMGNPHAIFWVGDVEAYDL
GRIGPLLERHPIFPEGANISLAHVFAPDQIRVKVWERGAGLTRACGTAACAVAVAAARDG
RAGRRSTVHLPGGPLTIEWREGDGHVLMTGATEVEFEGEIDLDTLAWERTGPGDADAAAA
EAAS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagcgcgcagaccctttctcaagatgaacggcctcggcaacgatttcgtcgtc
tgggatgcgcgtgccgaggccctgtcgctgtcgcccgagaccatcgccgcgctcggaaac
cgctcgaccggcatcggcttcgaccagatgatcacggtggagtgctcgccggccggcgcc
gacgccttcatgcgcattcacaactgcgacggcagccaggtctccgcctgcggcaacgcc
acgcgctgcgtcggccgtctgctgatggaggaaagcggccggccggatgccaacatcgag
acccgtgccggcctgctggtcgcgcgcgcgaccggggatccgcgcgtcgtcaccgtcgac
atgggcgtgccgcggctcaggtgggacgagatcccgctcgccgaggaatttgccgacacg
cgcgcgatcgagctgcagatcggtccgatcgacgcgccgatcttgcacacgccggcggtc
gtcaatatgggcaatccgcacgcgatcttctgggtcggcgacgtcgaggcctacgacctc
ggccgcatcggtccgctgctggaacgtcatccgatctttcccgagggcgccaacatctcg
ctcgcccatgtcttcgcgccggaccagatccgagtgaaggtgtgggagcgcggcgccgga
ctgacgcgcgcctgcggcaccgccgcctgcgcggtcgccgtcgccgccgcgcgcgacggc
cgggccgggcggcgctcgaccgtgcacctgccgggagggccgctgaccatcgagtggcgc
gagggcgacggccacgtgctgatgaccggggcgacggaagtggaattcgagggcgagatc
gacctagacacgctggcctgggagcgcaccgggccgggcgacgcggatgcggccgcggcg
gaggccgcttcgtga
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