Polymorphum gilvum: SL003B_0310
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Entry
SL003B_0310 CDS
T01458
Name
(GenBank) Probably methylase/helicase
KO
K26273
protein strawberry notch
Organism
pgv
Polymorphum gilvum
Brite
KEGG Orthology (KO) [BR:
pgv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgv03036
]
SL003B_0310
Chromosome and associated proteins [BR:
pgv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
SL003B_0310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
Clathrin_H_link
AAA
Motif
Other DBs
NCBI-ProteinID:
ADZ68745
UniProt:
F2J1A0
LinkDB
All DBs
Position
complement(304414..308904)
Genome browser
AA seq
1496 aa
AA seq
DB search
MAGRFFHARIAAVTGGERESRAGTDLSRCGRERALRGSIPSRSPEVLDMTPISESAAASA
AAPLPLAVAPDNAAAVFAAAQLLLPHLERGQRVDAAALRVAMESAFGASDAIGAWDWKTA
YDACEAASVLFLRKYGKALFRKAGSPSERLPQLGKIAGLLPTHTRRSEEAQAFQQFSTPI
PLGLAAVTAAAITSADRVLEPSAGTGLLAILAEIAGGTLVLNELADTRAGLLSLLFPALS
VTRFDAAQIDDHLDPAAIPTVVLMNPPFSVMANVEGRMADAAFRHVASALARLAPGGRLV
AITGANFAPDAPAWSSAYARLQERGRVVFSAAIDGSVYAKHGTTVATRLTVIDKLPADDP
SVFPAAPGVAPDVASLLGWLAEHVPARLPVDPSVAVPAAAHEAPRTVFGYLKRAAKIAPA
VASAEPDGVPLDYETVDWRAAEGGRLSDSIYEDYTLQAIRIAGSRAHPTPLVQSAAMASV
APPRPSYRPCLPDNIRDLLSEAQLETVIYAGEAHSDHLAGDWTVDKTFDVVKAAPEGTPG
AVRFRRGFFVGDGTGVGKGRENAAIILDNWLRGRRKAVWISKSDKLLLAAQRDWSALGME
RLLVTPLSRFPQGTAIAHPEGVLFTTYATLRSDDRGERVSRVKQIVEWLGSDFDGVIIFD
EAHEMANAAGGKSERGDVAASQQGRAGLRLQHALPNARIVYASATGASSVHNLAYAHRLG
LWGSEDFPFATRAEFVEAIEDGGVAAMEVLARDLKALGLYSARTLSFAGVEYELFEHELT
PEQHRIYNSYADAFAIIHNNLDAAMQAANVTGSTGTLNRQAKSAARSAFESAKQRFFNHL
LTGMMTPTLIRSIERDLAEGHSSVIQIVSTGEALMERRLAELPTEEWNDVRVDITPREYV
LDYLKHSFPIQLYEPYTDSQGKMSSRPVYRDGQPVESREAVLRRDELIAKLASLAPVPGA
LDQIIQHFGTEVVAEATGRSRRIVRKRGENGRPDRLVVETRAPSANLVDAQAFMDDAKRV
LIFSEAGGTGESYHADLDAKNQRLRMHYLLEAGFKAKPAVQGIGRTHRTHQKQPPCFRPG
AINVPAQKRFQSTIARHLDSLGAITRGQRQTGGQGLFRPEDNLENAYARDALRQLYLLIV
AGKIEGCSLDRFESSTGLKLMDSTGIKDDLPGITTFLNRMLALRIELQGILFTAFERLLN
ARIEGAIAAGTYDMALETLRAESFVVTDRKTIYTHPGTGAETRLLTIAERRRNQPVTLDD
ALGELRDPRARLLINERSRRVAVQIPATSVMLDDGQIERRIRLIRPMEAHNMPLRLLSET
HWVEADRDVFAAAWDAESADVPAFSDATLHIVSGILLPIWKRLPNESTRVYRLQTDEGER
IIGRRVSPAWASTATETGSSSLTPEAAFAALVDGSTMLDLAEGLQLRRVRVMGGYRIELS
GFTDTMRERLTAYGLFHEIISYKLRMFVPTDAGGVEVVTRILDRWPVERISEREAA
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcgcttttttcatgcccgcatcgccgccgtgaccggcggcgagagggagagc
cgggccgggacggatttgagccggtgcggtcgagagagagcgctgcgcggctcgatcccg
tcccgctctcccgaggttctcgatatgactccgatctccgaatccgcagcggcgtccgcc
gccgcgccgcttccgctcgccgtcgcgcccgacaacgccgccgccgtcttcgccgcggcc
cagctcctccttccccatctcgaacgcggccagcgcgtcgatgccgccgcgctgcgcgtc
gccatggaatcggcgttcggcgcgtccgacgccatcggcgcctgggactggaagaccgcc
tatgacgcctgcgaggcggcgtccgtcctcttcctgcgcaaatacggaaaggcgcttttc
cggaaagccggctcgccgtccgagcgtctgccgcagctcggcaagatcgccggcctgctg
ccgacgcacacgcgccgctccgaggaggcgcaggccttccagcagttctcgacgccgatc
ccgctcgggctcgccgccgtcaccgccgcggcgataacatcggccgaccgcgtgctggag
ccctcggccggcaccgggcttctcgccatcctggccgagatcgccggcgggacgctcgtg
ctcaacgagctggccgacacgcgcgccgggcttctctcccttctctttccagccttgtcc
gtcacccgtttcgacgcggcccagatcgacgaccatctcgatccggccgcgatcccgacc
gtggtgctgatgaacccgccattctcggtcatggcgaatgtcgagggccggatggccgat
gccgccttccgccatgtcgcctcggcgctggcgcgccttgcgccgggcggccggctcgtg
gcgatcaccggggccaatttcgcgcccgacgcgccggcctggtcctcggcctacgcccgt
ctgcaggaacgcggccgcgtcgtcttctccgccgcgatcgacggctcggtctacgccaag
cacggcacgacggtcgccacgcggctcaccgtgatcgacaagctgcccgccgacgatccg
tccgtctttccggcagctcccggcgtcgccccggacgtcgcctcgctgctcggctggctc
gccgagcatgtgccggcccggctcccggtcgatccctccgtcgccgttcccgccgccgcg
cacgaagcaccccgcactgtgtttggctatctgaagcgggccgcgaagatcgcgcccgcc
gtcgcctccgccgagccggacggcgtgccgctcgactacgagaccgtagactggcgtgcg
gcggagggcggccgcctctccgattccatctatgaggactacacccttcaggcgatccgt
atcgccgggtcccgggcccatccgacgccgctcgtccagtcggcggcgatggcctcggtc
gccccgccgcggccgagctatcgcccatgcctgccggacaacatccgcgacctgctgtcc
gaggcgcagttggagacggtcatctatgccggcgaggcgcatagcgatcatctcgccggc
gactggaccgtcgacaagaccttcgatgtcgtcaaggccgcccccgaaggcacgccgggg
gccgtccgcttccggcgcggcttcttcgtcggcgatggcaccggcgtcggcaaggggcgc
gagaacgctgccatcatcctcgataattggctccgaggccgccgcaaggcggtgtggatc
agcaagtcggacaagctgctgctcgccgcgcagcgtgactggagcgcgctcggcatggag
cgcctgctggtcacgccgctgtcgcgcttcccgcagggcacggccatcgcccacccggaa
ggcgtcctatttacaacctatgccacgctacgctccgacgaccgtggcgagagggtttcc
agggtcaagcagatcgtcgaatggttgggctccgatttcgatggagtgatcattttcgac
gaggcgcacgagatggcgaacgccgccggcggcaaaagcgagaggggcgatgtcgctgcc
tcgcagcaggggcgcgcaggcctcagactccagcacgcgcttccgaacgcgcgcatcgtc
tacgcctcggccaccggcgcctcctcggtccacaacctcgcctatgcccaccgcctcggc
ctctggggcagcgaggacttccccttcgccaccagggccgagttcgtggaggcgatcgag
gacggcggcgtcgcggcgatggaggtgctggcgcgcgacctcaaggcgctcggcctctat
tcggcgcggacgctttccttcgccggcgtcgaatacgagctgttcgagcacgagctgacg
cccgagcagcaccgcatctacaattcctatgccgacgccttcgcgatcatccataacaat
ctggatgccgcaatgcaggccgccaacgtgaccggcagcaccggcacgctgaaccggcag
gcgaagtcggccgcgcgcagcgctttcgagtcggccaagcagcggttcttcaaccacctc
ctgaccggcatgatgacgccgacgctgatccgctcgatagagcgcgatcttgccgagggt
cattcctcggtgatccagatcgtctcgaccggggaagcactcatggagcgccgcctcgcc
gagctgccgaccgaggaatggaacgacgtccgcgtcgacatcacgcctcgggaatatgtg
ctcgactacctcaagcactccttcccgatccagctctacgagccctatacggactcgcag
ggcaagatgtcgtcgcggccggtctaccgggacggccagcccgtcgagagccgcgaagcg
gtccttcgccgtgacgagctgatcgccaagctcgccagcctcgcgcccgtccccggcgcg
ctcgaccagatcatccagcatttcggcacggaagtcgtggccgaggccaccgggcggtcc
cgccgcatcgtgcgcaagcgcggcgagaacggcaggcccgaccgcctcgtcgtcgagacc
cgcgcgccctcggcgaacctcgtcgacgctcaggccttcatggacgacgcgaagcgcgtg
ctgatcttctccgaggccggtgggaccggcgagagctaccacgccgatctcgacgcgaag
aaccagcgccttcgcatgcactacctgctggaagccggcttcaaggccaagcccgccgtc
cagggcatcggccgcacgcaccggacgcaccagaagcagcctccgtgcttccggcccggc
gcgatcaacgtcccggcgcagaagcgcttccagagcaccatcgcccggcatctcgattcc
ctcggcgcgatcacgcgcggccagaggcagacgggcggacagggcctgttccgccccgag
gacaatcttgagaacgcctatgcacgcgacgcgctgcgccagctctacctgctgatcgtg
gccggcaagatcgagggatgctcgctcgaccgcttcgagtcctccaccggcctcaagctc
atggactcgaccggcatcaaggacgatctccccggcatcacgaccttcctgaaccggatg
ctggcgctcaggatcgagttgcagggcatcctcttcacggcgttcgagcggctgctgaac
gcccgcatcgagggcgcgatcgccgccggcacctacgacatggcgctggaaacgctgcgc
gccgagagcttcgtcgtcaccgaccggaagacgatctacacccatccgggcaccggcgcg
gaaacgcggctcctcaccatcgccgagcgcaggcgcaaccagccggtcacgctcgatgac
gcgctcggcgaactccgcgatccgcgcgcccggctcctgatcaacgagcgctcgcgccgc
gtcgccgtccaaattccggcgacgagcgtcatgctcgacgacggccagatcgagcggcgc
atccgcctcatccggccgatggaggcgcacaacatgccgctcaggctgctgagcgagacc
cattgggtcgaagccgaccgcgacgtgttcgcagccgcctgggatgccgagagcgcggac
gtgccagcgttctcggacgcgacgctgcacatcgtcagcggcatcctgctgccgatctgg
aagcggctgccgaacgaatcgacgcgcgtctatcgtctccagaccgacgagggcgagcgc
atcatcggccgcagggtctcgcccgcctgggcttcgaccgcgaccgagaccggctcctcg
tcgctcacgccggaggccgccttcgccgcgctggtcgacggctcgaccatgctcgacctc
gccgagggcctccagcttcgccgggtccgcgtcatgggcggctatcgcatcgagctgtcg
ggcttcaccgacacgatgcgcgagcgcctgaccgcctacggtctcttccacgagatcatc
tcctacaagctcaggatgttcgtgccgaccgacgccgggggcgtcgaggtcgtgacgagg
attctcgaccgttggccggtcgagcgcatctccgagcgggaggctgcgtga
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