Polymorphum gilvum: SL003B_0719
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Entry
SL003B_0719 CDS
T01458
Symbol
gabD1
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP+] (SSDH)
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pgv
Polymorphum gilvum
Pathway
pgv00250
Alanine, aspartate and glutamate metabolism
pgv00310
Lysine degradation
pgv00350
Tyrosine metabolism
pgv00650
Butanoate metabolism
pgv00760
Nicotinate and nicotinamide metabolism
pgv01100
Metabolic pathways
pgv01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pgv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SL003B_0719 (gabD1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SL003B_0719 (gabD1)
00310 Lysine degradation
SL003B_0719 (gabD1)
00350 Tyrosine metabolism
SL003B_0719 (gabD1)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
SL003B_0719 (gabD1)
Enzymes [BR:
pgv01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
SL003B_0719 (gabD1)
1.2.1.20 glutarate-semialdehyde dehydrogenase
SL003B_0719 (gabD1)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
SL003B_0719 (gabD1)
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Motif
Pfam:
Aldedh
DUF742
Motif
Other DBs
NCBI-ProteinID:
ADZ69149
UniProt:
F2IVP2
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Position
758530..759981
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AA seq
483 aa
AA seq
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MRSLTDPTLLKSQCYIDGCFVGEGRVDVTDPATGRVLAKVPDMGADQAVQAVEVAAAAFK
SWAALTARERSTVLRAWFDLIMANRADLAAILTSEQGKPYPEALGEIDYAASFVEFYAEE
AKRVLGEILPSHTTDARLLVLRQPIGVVAAITPWNFPAAMITRKIAPALAAGCTVVVKPA
PETPLTALALAELAHRAGFPKGTVNVLTGDAVAIGGVLTSHPKVRFVGFTGSTAVGKLLM
AQAATTVKKVALELGGNAPFIVFDDADLDAAVEGAIASKYRNMGQTCVCSNRFYVHDAVY
DAFVDKLAARVATLKVGNGFEEGVVQGPLINERAVSKVERHISDALGKGARVVAGGKRHT
LGHTFFEPTVIADAAEGMQIAAEETFGPVAPVFRFHAEAEAIAAANNTESGLAAYFYARD
VGRIFRVLEALEYGMVGVNSGRISTELAPFGGIKESGNSREGSHHGIAEFTELKYACIGG
LTA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcgcttaccgatccgacgctgctgaaatcccagtgctatatcgacggttgcttc
gtgggcgagggacgcgtcgacgtcaccgacccggccaccggtcgggtcctcgccaaggtg
cccgacatgggcgccgaccaggctgtgcaggccgtcgaggttgctgcggcggcgttcaag
tcctgggccgccctgacggcccgggagcgcagcacggtgctgcgcgcctggttcgacctg
atcatggccaaccgggcggacctcgccgcgatcctcaccagcgagcagggtaagccctat
cctgaagcattgggcgagatcgactatgcggcgtcgttcgtcgagttctacgccgaggag
gccaagcgagtgctgggcgagatcctgccctcgcacaccactgatgcccgcctgctggtg
ctgcgccagccgatcggcgtcgtcgctgcgatcacgccgtggaactttccggcggccatg
atcacccgcaagatcgcgccggcactcgccgccggatgcacggtggttgtcaagccggcg
ccagaaacgccactgacggccctggcgttggccgaactggcccatcgcgccggcttcccc
aaaggcacagtgaacgtgctgaccggcgatgccgtggccatcggcggcgtgcttaccagc
caccccaaggtccgtttcgtcggcttcaccggttcgaccgctgtcggcaagctgctgatg
gctcaggcggcaacgacggtcaagaaggtggcgctcgaactcggcggcaatgcgccgttc
atcgtcttcgacgatgccgatctcgatgcggccgtcgagggagcgattgcgtcgaaatac
cgcaacatgggtcagacctgcgtctgttcgaaccgcttctacgtccatgatgcggtgtac
gacgcctttgtcgacaagctggcggcgcgcgtggccacgctcaaggtcggcaacggcttt
gaagagggtgtcgtccagggaccgttgatcaacgagcgggcggtttccaaggtcgagcgg
cacatttccgatgcgctcggcaagggagcgcgggtggtggcgggcggcaaacggcacaca
ctcggccacaccttcttcgagcctacggtgattgcggatgcggcagaaggcatgcagatc
gcggccgaggagaccttcgggcccgtcgcgccggtcttccgcttccatgccgaagccgag
gcgatcgcggctgccaacaacacggagtcggggctcgccgcctatttctacgcgcgggac
gtggggcgtatcttccgggtcctggaagcgctcgagtacggcatggtcggggtcaattcg
ggtcgtatctcgaccgaactggcgccgtttggcggcatcaaggaaagcggcaactctcgc
gaaggatcgcaccacggcatcgccgagttcacagagctgaaatacgcttgcatcggcggt
ctgacagcctga
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