Polymorphum gilvum: SL003B_0831
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Entry
SL003B_0831 CDS
T01458
Symbol
fadD3
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pgv
Polymorphum gilvum
Pathway
pgv00061
Fatty acid biosynthesis
pgv00071
Fatty acid degradation
pgv01100
Metabolic pathways
pgv01212
Fatty acid metabolism
pgv02024
Quorum sensing
pgv04146
Peroxisome
Module
pgv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pgv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SL003B_0831 (fadD3)
00071 Fatty acid degradation
SL003B_0831 (fadD3)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SL003B_0831 (fadD3)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SL003B_0831 (fadD3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pgv01004
]
SL003B_0831 (fadD3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgv04147
]
SL003B_0831 (fadD3)
Enzymes [BR:
pgv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SL003B_0831 (fadD3)
Lipid biosynthesis proteins [BR:
pgv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SL003B_0831 (fadD3)
Exosome [BR:
pgv04147
]
Exosomal proteins
Exosomal proteins of breast milk
SL003B_0831 (fadD3)
Exosomal proteins of breast cancer cells
SL003B_0831 (fadD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
YwhD
Motif
Other DBs
NCBI-ProteinID:
ADZ69261
UniProt:
F2IWG2
LinkDB
All DBs
Position
890640..892625
Genome browser
AA seq
661 aa
AA seq
DB search
MAGLADVAARDADTFPKILLRNARDLGNRTAMREKDLGIWQSWTWAEVLEETRALSLGLK
DLGMTAGDKVAIVGSNRPRLYWSMVAAQALGAVPVPVYADSVAEEMAFVLGHAEVRFAVV
EDQEQVDKLLSMQEQVPSLRTVVYDEPRGLRGYDHTHLHDFTSVQERGRAIQKSDPAVAK
AWEDGFAPYDGSDLAVILYTSGTTGRPKGVMLSFDNLIVSARNGNAFDKLDETEEVLAYL
PMAWIGDHVFSLAQAYTAGYCVNCPESLDTVDLDRLEIAPTYFFAPPRVFEALLTRIMVR
MEDAGRLKKRMFDFFMDVARRSGEKILNREPVPVSDRILYALGEILVYGPLKNRIGFTRL
KVGYTAGEAIGPEIFRFYRSLGLNLKQLYGQTEASVYITLQPDGEIYGDTVGKPAPQVEL
KIADNGEVLYRSPGVFIGYYKNDEATRTTKTGDGWVHTGDAGFIADNGHLKIIDRAKDVG
RLNDGSLFAPKYIENKLKFFPNIKEVVAFGHERDFTAVFINIDLTAVGSWAERNNVNYAS
YQELAAHPDVYRMIESHVDQVNRDLANEPMMAGAQIRRFLILHKELDADDGELTRTQKVR
RSFIAERYAPLIEGLYDGSRSRHVRTEVTFEDGRVGAIEATIEIRDMTPHVAGERMREAA
E
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcagggctggccgacgtcgccgcacgcgacgcggacacctttcccaagattcttctg
cgcaacgcgcgggatctcgggaacaggaccgcaatgcgcgagaaggatctcgggatctgg
caaagctggacttgggccgaggtcctagaagagacccgagccttgtcgctggggctcaag
gacctcggtatgacggcgggcgacaaggttgccatcgtcggctccaaccggccgcggctc
tactggtccatggttgctgcccaggcgttgggcgccgttccggtacccgtctatgcggac
tcggttgcggaggagatggccttcgttctcggtcacgcggaagttcggtttgccgtggtc
gaggatcaggagcaggtcgacaagctgctttccatgcaggagcaggtcccgtcgctcagg
accgtcgtctatgacgagccccgcggactgcgcggttacgaccacacccatctgcacgat
ttcacgtccgttcaggagcgagggcgcgccatccagaagagcgatcccgccgtcgcgaag
gcatgggaggacggttttgccccgtatgacggcagtgacctcgccgtcattctctacacc
tccggcaccaccggccggccgaagggcgtgatgctgtctttcgacaacctgatcgtctcg
gcccgcaacggcaatgccttcgacaagctggatgagaccgaggaggtgctcgcctacctg
ccgatggcgtggatcggcgaccacgtgttctcgctcgctcaggcctacaccgccgggtac
tgcgtcaactgtccggaaagcctcgacacggtcgacctcgaccggctcgagatcgcgccg
acctatttcttcgcgccgcctcgcgtcttcgaggcgctgctcaccaggatcatggtgcgc
atggaggacgccggacgcctcaagaagcggatgttcgacttcttcatggacgtcgcgcgc
cggtcgggcgagaagatcctcaaccgcgagccggtgccggtctcggaccggatcctctat
gcgctgggcgagattctggtctacggtccgctcaagaaccgcataggcttcacacggctc
aaggtcggctataccgccggcgaggcgatcgggccggagatcttccgcttctaccgctcg
ctcggcctcaacctcaagcagctctacggccagaccgaagccagcgtctacatcaccctg
cagccggacggcgagatctacggcgacaccgtcggcaagccggcgccgcaggtcgaactc
aagatcgccgacaacggcgaggtgctttaccgttcgcccggcgtcttcatcggctactac
aagaacgacgaagcaacccgcacgaccaagacaggggacggctgggtgcacaccggcgac
gccggcttcatcgccgacaacggtcacctgaagatcatcgaccgcgccaaggacgtcggc
cggctgaacgacgggtcgctgttcgctccgaaatacatcgagaacaagctgaagttcttc
cccaacatcaaggaagtcgtcgctttcggccatgagcgcgacttcacggccgtgttcatc
aacatcgacctgaccgcggttggcagctgggcggaacgcaacaatgtgaactacgccagc
tatcaggaactcgccgcgcatccggacgtgtaccgaatgatcgagtcccacgtcgatcag
gtgaaccgggaccttgccaacgagcccatgatggcgggtgcgcagatccggcggttcctc
atcctgcacaaggaactggacgcggacgacggcgaactcacgcgcacccagaaggtgcgc
cggagcttcatagcggagcgttacgcgccgctgatcgaaggcctctacgacggctccagg
tcgcggcacgtccgcaccgaggtcacctttgaggacggccgcgtcggcgcgatcgaggcc
accatcgaaatccgggacatgacgccccatgttgcgggcgagaggatgcgggaggccgcg
gaatga
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