Polymorphum gilvum: SL003B_1763
Help
Entry
SL003B_1763 CDS
T01458
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pgv
Polymorphum gilvum
Pathway
pgv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pgv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SL003B_1763 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgv03021
]
SL003B_1763 (rpoA)
03400 DNA repair and recombination proteins [BR:
pgv03400
]
SL003B_1763 (rpoA)
Enzymes [BR:
pgv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SL003B_1763 (rpoA)
Transcription machinery [BR:
pgv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SL003B_1763 (rpoA)
DNA repair and recombination proteins [BR:
pgv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SL003B_1763 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF211
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ADZ70190
UniProt:
F2IUW1
LinkDB
All DBs
Position
1853135..1854196
Genome browser
AA seq
353 aa
AA seq
DB search
MFISRRDSRRGKNVTIQKNWQELIKPTKLDVKPGEDPRFVATVVAEPLERGYGLTLGNAL
RRILLSSLQGAAVTAVQIDGVLHEFSSIPGVREDVTDIVLNIKEIAIRMEGEGPKRMVVR
KQGPGLVTAGDIQTVGDVEVLNPELVLCTLDEGAEIRMEFTVNTGKGYVPSDRNRPEDAP
IGLIPVDSLYSPVKKVSYKVEATREGQVLDYDKLTLTVETDGSVKPDDAVAYAARILQDQ
LSIFVNFEEPKREVAEDHVPELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKT
EAEMLRTPNFGRKSLNEIKEVLAQMGLHLGMDVANWPPENIEDLAKRYEDHQY
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtgttcatctcccggcgggacagccgaaggggcaagaacgtgaccattcagaagaactgg
caagagctgatcaagccgaccaagctggacgtgaagcccggcgaagatccgcgcttcgtt
gctacggtcgttgccgagccgctcgagcgcggctacggcctgacgcttggcaacgcgctg
cggcgcattctgctgtcctcgcttcagggcgccgcggtgaccgccgtccagatcgacggc
gtgctgcacgaattctcgtccattccgggcgttcgcgaagacgtgacggacattgtcctg
aacatcaaggaaatcgccatacgcatggaaggcgaggggcccaagcgcatggtcgtgcgc
aagcagggacctgggctggtgaccgccggcgacatccagacagtcggcgatgtcgaggtg
ctcaatccggaactcgtcctgtgcaccctcgacgagggcgcggaaatccggatggagttc
acggtcaacacgggcaagggctatgttccgtccgaccgtaaccgtccggaagacgcaccg
atcggcctgattccggtcgacagcctgtattccccggtcaagaaggtatcgtacaaggtc
gaggcgacccgcgaaggtcaggtcctcgactatgacaagctgacgctcacggtcgagacg
gacggatcggtcaagccggacgatgcggtcgcctatgccgcgcgcatccttcaggaccag
ttgtcgatcttcgtcaatttcgaggagccgaagcgcgaggtcgccgaggatcacgttccg
gaactggcgttcaatccggcactgctcaagaaggtcgacgaactggagctttccgtccgg
tcggccaactgcctgaagaacgacaacatcgtctatatcggggatctcatccagaagacc
gaagccgaaatgctccgcacgccgaacttcggtcgcaagtcgctcaacgagatcaaggaa
gttctcgcccagatgggtctgcatctcggcatggacgtcgccaactggccgccggagaac
atcgaggatctcgccaagcgttacgaggatcatcagtactga
DBGET
integrated database retrieval system
