Polymorphum gilvum: SL003B_2091
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Entry
SL003B_2091 CDS
T01458
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pgv
Polymorphum gilvum
Pathway
pgv03030
DNA replication
pgv03430
Mismatch repair
pgv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SL003B_2091 (dnaE)
03430 Mismatch repair
SL003B_2091 (dnaE)
03440 Homologous recombination
SL003B_2091 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgv03032
]
SL003B_2091 (dnaE)
03400 DNA repair and recombination proteins [BR:
pgv03400
]
SL003B_2091 (dnaE)
Enzymes [BR:
pgv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SL003B_2091 (dnaE)
DNA replication proteins [BR:
pgv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SL003B_2091 (dnaE)
DNA repair and recombination proteins [BR:
pgv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SL003B_2091 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
DUF655
Motif
Other DBs
NCBI-ProteinID:
ADZ70517
UniProt:
F2IY14
LinkDB
All DBs
Position
2207066..2210506
Genome browser
AA seq
1146 aa
AA seq
DB search
MIDAGFVHLRVHSALSLLEGALPIKKLLDLAKADAQPALAITDTGNLFGAQEFSGKAWGA
GIQPIIGCQLAVAFDDGGGEDRRGEPPLLDVVLLAASEAGYGNLMELSSRAYLDTATGLK
PHVPAALLEEKSGGLILLTGGVNGPIGRALLAGNRTLAEARLKRLAAAFPNRTYVELQRH
GMAEERRCEPGFLELAYELGLPLVATNEAFFPKREDYEAHDALICIAEGRVLIEEDRRKL
TPEHYFKSRAEMLELFCDLPEATANTVEIARRCHYRPLRRDPILPRFAGADADPEAAEKA
EAEELRRQARDGLKARLEAHGLAPGLGQQDYWDRLDYELGVIERMKFPGYFLIVADFIKW
AKAHDIPVGPGRGSGAGSVVAWALTITDLDPMRFSLLFERFLNPERVSMPDFDIDFCQYR
REEVIRYVQEKYGRRQVAQIITFGSLQARAVLRDVGRVLQMPYGQVDRLCKLVPANPANP
VTLAQAIGDEPRLREAAREEEIVDRLLTMAQKLEGLYRHASTHAAGVVIGDRPLEQLVPL
YRDPRSDMPVAQFNMKMVEDAGLVKFDFLGLKTLTVIDTAVKLIARKGVTVDMASVPLDD
ARTYQLLARGETVGVFQLESQGMRRAIAGMKPDRFEDIIALVALYRPGPMENIPVYNAVK
HGEQEADYLHPLLEPILKETNGIIVYQEQVMQIAQVLSGYSLGEADLLRRAMGKKIAAEM
EVQRARFVDGAVERGVDRDQAGTIFDLVAKFANYGFNKSHAAAYALVSYHTAWLKANHPV
EFMAASMTLDLGNTDKLGDFRQEARRMGIAIVPPSINRSMHPFDVDDGRIVYALGAIKGV
GEQAVQHIVEARGTQPFRSLGDFARRVSPRFLNKRTLESLAAAGAFDDLEPNRARVLEGL
DRIIGIAQRTEENSVLGQNELFGGGGEEEDLHLPEVAAWMPAERLQREHAAIGFYLSSHP
LDEYQPLLERMRVQSWAQFSEAVKRGASAGRLAGTVISRQERKTKSGNRMGIVRLSDASG
QFEALLFSEKLNQFRDQLEPGRSVVILVSADMRDDEPSLRVEQVDPIEAVATRVQKSLRV
FLRDERPLKSLARQLGGRGDGEVNVVVLLDGGRREVEVKLPGRYRLSPEIAGALKAVPGV
TDVQLS
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatgccggattcgtgcacctgagggtgcattccgccctgtcgctgctggaaggc
gcgctgccgatcaagaagctgctcgacctcgccaaggccgatgcgcagccggcgctggcg
attaccgataccggcaacctgttcggggcgcaggagttctccggcaaggcctggggggcc
ggcatccagccgatcatcggctgccagcttgccgtcgccttcgacgacggcggcggcgag
gatcggcgcggcgagccgccgctgttggacgtcgtgctgctggcggcaagcgaggcgggc
tacggcaaccttatggaactgtcgagccgggcctatctcgacacggcgacgggcctgaag
ccgcatgtgccggcggcactgctggaggaaaagtccggcgggctgatcctgctcaccggc
ggcgtcaacggcccgatcgggcgggcgctgctcgccggcaaccggacactggccgaggcg
cggctgaagcggctcgccgcagccttccccaaccgcacctatgtcgaactgcagcgccac
ggcatggccgaggagcgacgctgcgaaccgggcttcctcgagcttgcctacgaactcggc
ctgccgctggtcgccaccaacgaggcattcttccccaagcgcgaggactacgaggcgcat
gacgcgctgatctgcatcgccgagggccgggtgctgatcgaggaggatcggcgcaagctg
acgcccgagcactatttcaagtcccgcgcggagatgctggagctgttctgcgatctgccg
gaagcgaccgccaacacggtcgagatcgcccggcgctgccactaccggccgctccggcgc
gatccgatcctgccgcgcttcgccggcgcggacgccgatccggaggcggcggaaaaggcg
gaagcggaggaactccggcgccaggcgcgcgacggcctgaaggcgcggctcgaggcccat
ggcctcgctcctggcctgggccagcaggactactgggaccggctcgactacgaactcggc
gtcatcgagcggatgaagtttccaggctacttcctgatcgtcgccgacttcatcaaatgg
gccaaggcgcacgacattccggtcggtccgggccgcggctccggtgccggctcggtggtc
gcctgggcgctgaccatcaccgacctagacccgatgcgcttctcgctgctgttcgagcgc
ttcctcaatcccgagcgcgtgtcgatgcccgacttcgacatcgacttctgccagtaccgg
cgcgaggaggtgatccgctacgtgcaggaaaaatacggccgtcggcaggtggcgcagatc
atcaccttcggctcgcttcaggcgcgcgcggtgctgcgcgacgtcggccgggtgttgcag
atgccctatggccaggtcgaccggctgtgcaagctggtgccggccaacccggccaacccg
gtcacgctcgcccaggcgatcggcgacgagccgcggctgcgcgaggcggcacgcgaggag
gagatcgtcgaccggctgctgaccatggcgcagaagctggaaggactctaccgccacgcc
tcgacccacgccgccggcgtggtcatcggcgaccggccgctggaacagctggtgccgctc
taccgcgatccgcgctccgacatgccggtcgcccagttcaacatgaagatggtcgaggac
gcgggcctggtgaagttcgacttcctcggcctgaagacgctgacggtgatcgacacggcc
gtcaagctgatcgcccgcaagggggtcaccgtcgacatggcctcggtaccactcgacgat
gccaggacctaccagctgctggccagaggcgagacggtcggcgtgttccagctggaaagc
cagggcatgcgccgggcgatcgccggcatgaagcccgaccgcttcgaggacatcatcgcg
ctggtggcgctgtaccggccgggcccgatggagaacatcccggtctacaatgccgtcaag
cacggcgagcaggaggccgactacctgcacccgttgctggagccgatcctgaaggagacc
aacggcatcatcgtctaccaggaacaggtgatgcagatcgcccaggtgctgtcgggctac
tcgctcggcgaggccgacctcttgcgccgcgccatgggcaagaagatcgccgcggagatg
gaggtgcaacgggcccgcttcgtcgacggcgcggtcgagcgcggcgtcgaccgcgaccag
gccggcacgatcttcgacctcgtcgccaagttcgccaactacggcttcaacaagtcgcac
gcggctgcctatgcgctggtttcctaccacacggcctggctgaaggcgaaccacccggtc
gagttcatggcggcatcgatgacgcttgacctcggcaacaccgacaagctcggcgacttc
cgacaggaggcgcgccgcatgggcatcgcgatcgtgccgccgtcgatcaaccgttccatg
catcctttcgacgtcgacgacggcaggatcgtctacgctctcggcgccatcaagggcgtc
ggcgagcaggcggtgcagcacatcgtcgaggcgcgcggcacgcagccgttccggagcctc
ggcgacttcgcgcgccgggtgtcgccgcgcttcctcaacaagcggacgctggagagcctc
gccgcggcgggcgccttcgacgacctggagccgaaccgggcgcgggtcctggaagggctc
gaccggatcatcggcatcgcgcagcgcacggaggaaaacagcgtcctcggccagaacgag
ctgttcggcggcggcggcgaggaggaggacctgcacctgcccgaggtcgccgcctggatg
ccggccgagcggctgcagcgcgagcatgcggcgatcggcttctacctgtcgtcgcatccg
ctggacgagtaccagccgctgctggagcggatgcgggtgcagtcctgggcgcagttttcc
gaagcggtcaagcgcggcgcctcggccggccggctcgccggcacggtgatctcgcgccag
gagcggaagaccaagtccggcaaccgcatgggcatcgtgcggctgtcggacgcctctggc
cagttcgaggcgctgctgttttccgaaaagctcaaccagttccgcgaccagctcgagccc
ggccggtcggtggtgatcctggtcagcgccgacatgcgcgacgacgagccgagcctgcgc
gtggagcaggtcgatccgatcgaggcggtggcgacgcgggtgcagaagagcctgagggtg
ttcctgcgcgacgagcggccgctgaagagcctggcgcgccaactgggcgggcggggcgac
ggcgaggtcaatgtggtcgtgctgctcgacggcggccggcgcgaggtcgaggtcaagctg
cccggccgctaccggctgtcgccggaaatcgccggggcgctcaaggccgtacctggcgtg
accgacgttcagctgtcctga
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