Polymorphum gilvum: SL003B_2129
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Entry
SL003B_2129 CDS
T01458
Symbol
fdsA
Name
(GenBank) Formate dehydrogenase, alpha subunit protein
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
pgv
Polymorphum gilvum
Pathway
pgv00630
Glyoxylate and dicarboxylate metabolism
pgv00680
Methane metabolism
pgv01100
Metabolic pathways
pgv01120
Microbial metabolism in diverse environments
pgv01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pgv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SL003B_2129 (fdsA)
09102 Energy metabolism
00680 Methane metabolism
SL003B_2129 (fdsA)
Enzymes [BR:
pgv01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
SL003B_2129 (fdsA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_10
Fer4_6
Fer4_21
Fer4_9
Fer4_8
Fer4_2
Fer4_15
Fer4_16
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
ADZ70554
UniProt:
F2IY51
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All DBs
Position
2252473..2255352
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AA seq
959 aa
AA seq
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MELIRETDYGTPPSRSQKTVTLTIDGFEVSVPEGTSLMRAAMEIGIKVPKLCATDMVDAF
GSCRLCLVEIEGRAGTPASCTTPAAQGMVVHTQTGRLKDLRRGVMELYISDHPLDCLTCA
ANGDCELQDMAGAVGLREVRYEAVDTHFRPRRTGGDANPQWLPKDESNPYFTYDPSKCIV
CSRCVRACEEVQGTFALTIEGRGFGSRVAAGLAEPFVASECVSCGACVQACPTATLQEKS
VIEIGLPEHSRVTTCAYCGVGCSFKAEMRGEELVRMVPYKDGKANRGHSCVKGRFAYGYA
NHRDRILKPMIRKSISDPWQEVSWDEALAYAASEFRRIQYQHGRSAVGGITSSRCTNEET
YLVQKLIRSVFGNNNVDTCARVCHSPTGYGLKTTYGTSAGTQDFDSVEHTDVVLLIGANP
TDGHPVFASRLKKRLRAGAKLIVVDPRRIDLVRSPHVEAAHHLALRPGTNVAVLTAMAHV
IVTEGLVDEAFVRERCDWDAFQDWAAFVSEPRHSPESVSQVTGVAPETLRSAARLFATGG
NGSIYYGLGVTEHSQGSTTVMAIANLAMATGNIGRPGVGVNPLRGQNNVQGSCDMGSFPH
ELPGYRHVSDDATRAVFERLWGTAIDDEPGLRIPNMLDAAVDGSFKGLYVQGEDILQSDP
DTKHVAAGLAAMECVVVHDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRINRVRKVMT
PKNGLADWQVTQALANAMGAGWSYADPSEIMDEIAATTPSFAGVSYALLDRAGSVQWPCN
ETAPLGTPVMHIDGFVRGKGRFILTEYVATDEKTGPRFPLLLTTGRILSQYNVGAQTRRT
ANVVWHEEDRLEIHPHDAEQRGIKDGAWVRLSSRSGETTLRALITDRVAPGVVYTTFHHP
ATQANVITTDYSDWATNCPEYKVTAVQVSPSNGPTDWQVDYEEHARLSRRIATPLEAAE
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggagcttatccgggaaaccgactacggcacgccgccgtcccgttcgcaaaagaccgtc
acgctgaccatcgacggcttcgaggtgagcgtgccggaaggcacctcgcttatgcgcgcg
gcgatggagatcggcatcaaggtgcccaagctgtgcgccaccgacatggtcgacgcgttc
ggctcctgccgactgtgtctggtcgagatcgaggggcgggccggaacgccggcctcctgc
accacgccggcggcgcagggcatggtcgtgcacacccagaccgggcggctgaaggacctg
cgccggggcgtgatggagctttacatctccgaccacccgctggactgtctgacctgcgcg
gccaacggcgactgcgagctgcaggatatggccggcgcggtcggcctgcgcgaggtgcgc
tacgaggcggtcgacacccacttccggccgcgccggaccggcggcgacgctaatccgcaa
tggctgcccaaggacgagagcaatccctatttcacctacgacccgtccaagtgcatcgtc
tgttcgcgctgcgtgcgcgcctgcgaggaggtccagggcaccttcgcgctgaccatcgag
gggcgcggtttcggctcgcgcgtcgcggcgggtctggcggagccgttcgtcgcctccgaa
tgcgtgtcctgcggcgcctgcgtgcaggcctgcccgaccgccacgctgcaggaaaagtcg
gtgatcgagatcggcttgccggagcattcgcgggtgacgacctgcgcctattgcggcgtc
ggctgctcgttcaaggccgagatgcgcggcgaggaactggtgcgcatggtgccctacaag
gacggcaaggccaaccggggccattcctgcgtcaagggccggttcgcctacggctatgcc
aatcaccgtgaccgcatcctcaagccgatgatccgcaagtccatttccgatccctggcag
gaagtgtcctgggacgaggcgctggcctatgcggcaagcgagttccgccgcatccagtac
cagcatggccgcagcgcggtcggcggcatcacttcgtcgcgctgcaccaacgaggaaacc
tacctggtccagaagctgatccgctcggtgttcggcaacaacaacgtcgacacctgcgcg
cgcgtgtgccactcgccgaccggctatggcctgaagacgacctacggcacctcggccgga
acgcaggacttcgacagcgtcgagcacaccgacgtggtgctgctgatcggtgccaatccg
accgacggccacccggtattcgcctcccggctgaagaagcggctgcgcgccggggcgaag
ctgatcgtggtcgatcccaggcgtatcgacctggtccgctcgccgcatgtggaggcggcg
catcatcttgccctgcggccggggaccaacgtcgccgtgctcaccgccatggctcatgtc
atcgtcacggaaggccttgtcgacgaggccttcgtgcgcgagcgctgcgactgggacgcc
ttccaggactgggcggcgttcgtgtccgagccgcgccacagtcctgaatccgtctcgcag
gtgaccggagtcgcacccgaaaccctccgctccgccgcgcgcctgttcgccaccggcggc
aacggctcgatctactacggcctcggtgtcaccgagcacagccagggctcgaccaccgtg
atggcgatcgccaacctggcgatggcgaccggcaacatcggccgacccggtgtcggggtc
aatccgctgcgcggccagaacaacgtccagggctcctgcgacatgggctcgttcccgcac
gaactgcccggctaccggcacgtgtcggatgacgcgacgcgggcggtgttcgaacggctg
tggggcacggccatcgacgacgagccgggcctgcgcatccccaacatgctcgacgccgcc
gtcgacggcagcttcaagggactctacgtccagggcgaggacatcctgcagtccgacccg
gacacgaaacatgtcgcggccggcctggcggcgatggaatgcgtcgtcgtgcacgacctg
ttcctgaacgagaccgccaattacgcgcatgtgttcctgccgggctcgaccttcctggaa
aaagacggcaccttcaccaacgccgagcggcggatcaatcgggtgcgcaaggtgatgacg
ccgaagaacggcctcgccgactggcaggtgacgcaggccctcgccaacgccatgggcgcc
ggctggagctatgccgacccgtccgagatcatggacgagatcgccgccacgacgccgagc
ttcgccggcgtctcctatgcgctgctggaccgggcggggtcggtgcagtggccgtgcaac
gagacggctccgctcggcacgccggtgatgcacatcgacggcttcgtgcgcggcaagggc
cggttcatcctgaccgaatatgtcgccaccgacgagaagaccggcccgcgctttccgctg
ctgctgaccaccggccgcattctcagccaatacaacgtcggtgcccagacccggcgcacg
gccaacgtcgtctggcacgaggaggaccggctggagatccatccccacgacgccgagcag
cgcggcatcaaggacggcgcctgggtgcggctttccagccgctccggcgagacgacgctg
cgcgcgctgattaccgaccgcgtggcgccgggcgtggtctacaccaccttccaccatccg
gcgacccaggccaacgtgatcaccaccgactattcggactgggcgaccaactgtccggag
tacaaggtgaccgcggtccaggtgtcgccctcgaacggaccgaccgactggcaggtcgac
tacgaggaacacgcgcggctgtcgcggcggattgcgacgccgctggaggcagcggaatga
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