Polymorphum gilvum: SL003B_2198
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Entry
SL003B_2198 CDS
T01458
Symbol
serS
Name
(GenBank) Seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pgv
Polymorphum gilvum
Pathway
pgv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pgv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SL003B_2198 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pgv01007
]
SL003B_2198 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgv03016
]
SL003B_2198 (serS)
Enzymes [BR:
pgv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
SL003B_2198 (serS)
Amino acid related enzymes [BR:
pgv01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SL003B_2198 (serS)
Transfer RNA biogenesis [BR:
pgv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SL003B_2198 (serS)
Prokaryotic type
SL003B_2198 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Sod_Ni
Motif
Other DBs
NCBI-ProteinID:
ADZ70623
UniProt:
F2IZ08
LinkDB
All DBs
Position
2319632..2320912
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AA seq
426 aa
AA seq
DB search
MFDIKWIRDNADAFDRALARRGHESAAERLLSLDDARRAHIARLQEAQERRNAASKEVGK
AKASGDEAAAQALIDEVAKIKSFIQQGEEEERRLVAAVDAALAVIPNLPLDEVPDGADET
GNVVHHVWGEKLAFDFDHAPKEHFELAAAEADMDFATAAKLSGSRFVLLKGQLARLERAL
GQFMLDLHTGEHGYTEVAPPLLVRADALYGTSQLPKFEEDLFKTSSDHYLVPTAEVPLTN
MVAGEILGEGDLPLRVSALTHCFRSEAGSAGRDVRGMLRQHQFVKCELVSVTRPEDSLSE
LERMLGCAETVLQKLGLHYRVVTLCTGDMGFASQKTYDIEVWLPGQNAYREISSCSVCGD
FQARRMNARYRLTDGKALRHVHTLNGSGVAVGRAMIAVMENYQNADGSVTVPEALRPYMN
GIERIG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatatcaagtggatcagggacaacgccgatgccttcgaccgggcgctcgcccgc
cgcggacacgagtcggccgccgagcggctgctttcgctcgacgacgcgcgccgcgcccac
attgcccgcctgcaggaggcgcaggagcgccgcaacgccgcctccaaggaggtcggcaag
gccaaggcttccggagacgaagcggccgcgcaggcgctgatcgacgaggtcgccaagatc
aagtcgttcatccagcagggcgaggaggaggaacgccggctggttgccgcggtcgacgcc
gcgctcgcggtgattcccaacctgccgctcgacgaggtgccggacggggccgacgagacc
ggcaacgtggtgcatcacgtctggggcgagaagctggcgttcgacttcgatcatgccccg
aaggagcatttcgagctggccgccgccgaggcggacatggacttcgccaccgcggccaag
ctgtcgggctcgcgcttcgtgctgctgaagggccagctcgcccggctcgaacgggcgctc
ggccagttcatgctcgacctgcacaccggcgaacacggctacacggaggtggcgccgccg
ctgctggtgcgcgcggacgcgctctacggcacctcgcagctgccgaagttcgaggaggac
ctgttcaagacctcctccgaccattacctggtgccgaccgccgaggtgccgctgaccaac
atggtcgccggcgagatcctgggcgagggcgacctgccgctgcgcgtctccgcgctgacc
cactgcttccgctccgaggccggctcggccgggcgcgacgtgcgcggcatgctgcgccag
caccagttcgtcaagtgcgagctggtgtcggtgaccaggcccgaggactcgctgtccgaa
ctggagcgcatgctcggctgcgccgaaacggtgctgcagaagctcggcctgcattaccgc
gtggtgacgctgtgcaccggcgacatgggcttcgcctcgcagaagacctacgacatcgag
gtctggctgccgggccagaacgcctatcgcgagatctcgtcctgctcggtgtgcggcgac
ttccaggcacggcggatgaacgcccgctaccggctgaccgacggcaaggcgctgcgccat
gtccacacgctgaacggctcgggcgtcgccgtcggccgcgccatgatcgcggtcatggag
aactaccagaacgccgacgggtcggtgaccgtgccggaggcattgcgtccctacatgaac
ggcatcgagcggatcggctga
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