Polymorphum gilvum: SL003B_2218
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Entry
SL003B_2218 CDS
T01458
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pgv
Polymorphum gilvum
Brite
KEGG Orthology (KO) [BR:
pgv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgv03032
]
SL003B_2218 (gyrA)
03400 DNA repair and recombination proteins [BR:
pgv03400
]
SL003B_2218 (gyrA)
Enzymes [BR:
pgv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SL003B_2218 (gyrA)
DNA replication proteins [BR:
pgv03032
]
Prokaryotic type
DNA Topoisomerases
SL003B_2218 (gyrA)
DNA repair and recombination proteins [BR:
pgv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SL003B_2218 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ADZ70643
UniProt:
F2IZR7
LinkDB
All DBs
Position
2344194..2346932
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AA seq
912 aa
AA seq
DB search
MADQDSSVSGGGLPSDIRPVSITDEMKRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYS
MHENGYEWNKPYRKSARVVGDVMGKYHPHGDSAIYDALVRMAQNFSLRLPLIDGQGNFGS
VDGDPAAAMRYTECRLQKVAHKLLDDIDKDTVDFQDNYDNSESEPVVLPAKFPNLLVNGA
GGIAVGMATNIPPHNLGEVIDAAIAMMENPAMTLNELLEIIPGPDFPTGGIILGRSGIRS
AYETGRGSVVMRGKVEVEEIRAGREALIVSEIPYQVNKATMIEKIAELVREKRIEGISDI
RDESDRLGMRVVIELKKDAVADVILNQLYRFSALQTSFGCNMVALNGGRPEQMLLSDMLK
AFIAFREEVIGRRTRFLLAKARDRAHVLVGLAIAVANIDEVIHLIRTAPDPATARAQLMQ
RNWPAMDVAPLILLIDDPRHTVNEDGTYRLSEEQARAILDLRLQRLTALGRDEIGDELNK
LGEEIADYLEILRSRPRIQQIIREELLEIRNEFATPRKTEIVEGGADLEDEDLIQREDMV
VTVSHTGYIKRVPLATYRAQRRGGKGRSGMATKDEDFVTRLFVANTHTPVLFFSSRGIVY
KMKVWRLPLGGPTSRGKALVNLLPLEAGEQISSIMPLPENEDSWADLDVMFATTRGTVRR
NKLSDFTQVNRNGKIAMKLDEGDGIIGVYTCTENDDVLLTTAAGQCIRFPVTDVRVFAGR
NSVGVRGINLAEDDHLISMSILRHFEADAEERVTYLKRRRLMRGETEDAGVEDEAEEAGA
EGHLSLERYAEMSAAEQIILTVSENGYGKRTSSFEYRVTGRGGKGITAMAVTRRNGPLVA
AFPVEDSDQIMLVTDGGQLIRCPVDGIRVAGRATQGVIVFNTAEDEKVVAVERVSEDEDG
DTGAESENGGEA
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
ttggccgaccaggattccagcgtatcgggcggcggactgccctccgacatccgccccgtt
tcgatcaccgacgagatgaagcgcagctatctcgattacgccatgagcgtgatcgtgagc
cgtgcgctgcccgatgtgcgggacgggctgaagccggtgcatcggcgcatcctctactcg
atgcacgaaaacggctacgagtggaacaagccctatcgcaagtccgcccgcgtggtcggc
gacgtcatgggtaagtatcacccgcacggcgacagcgcgatctacgacgccctcgtgcgc
atggcgcagaacttctcgctgcgcctgccgctgatcgacggccagggcaacttcggctcg
gtcgacggcgacccggcggcggccatgcgctacaccgagtgccgcctgcagaaggtggcg
cacaagctgctcgacgacatcgacaaggacacggtcgatttccaggacaactacgacaac
tccgaaagcgagcccgtcgtcctgccggccaagttcccgaacctgctggtcaacggcgcc
ggcggcattgccgtcggcatggcgaccaacatcccgccgcacaatctcggtgaggtgatc
gacgcggccatcgccatgatggaaaacccggcgatgaccctcaacgagctgttggagatc
atcccgggtccggatttcccgaccggcggcatcatcctcggccgttccggcatccgctcg
gcctacgagaccggccgcggctccgtcgtcatgcgcggcaaggtcgaggtcgaggagatc
cgcgccggccgggaggcgctgatcgtcagcgagatcccctatcaggtcaacaaggcgacg
atgatcgagaagatcgccgaactggtgcgcgagaaacgcatcgagggcatctccgacatc
cgcgacgagagcgaccggctcggcatgcgcgtcgtcatcgagctgaagaaggacgccgtc
gccgacgtcatcctgaaccagctgtaccggttctcggccctgcagacgagcttcggctgc
aacatggtggcgctgaacggcggccgaccggaacagatgctgctgtcggacatgctgaag
gccttcatcgctttccgcgaggaggtgatcggccggcgcacgcgcttcctgctcgccaag
gcgcgcgaccgcgcccatgtcctggtcggcctcgccatcgcggtcgccaacatcgacgag
gtcatccacctgatccgcaccgcgccggatccggccaccgcgcgtgcccagctgatgcag
cgcaactggccggcgatggacgtcgcgccgctgatcctcctgatcgacgatccgcgccac
acggtcaacgaggacggcacctaccggctgtccgaggaacaggcgcgcgccattctcgac
ctgcgcctgcagcggctgaccgcgctcggccgcgacgagatcggcgacgaactgaacaag
ctcggcgaggagatcgccgactacctggaaatcctgcgctcgcgcccccgcatccagcag
atcatccgcgaggaactgctggagatccgcaacgaattcgccaccccgcgcaagaccgag
atcgtcgagggcggagcggacctggaggacgaggacctcatccagcgcgaggacatggtg
gtgacggtcagccacaccggctacatcaagcgggtgccgctggcgacctaccgggcgcag
cggcgcggcggcaagggccgctccggcatggcgaccaaggacgaggatttcgtcacccgc
ctgttcgtcgccaatacccatacgccggtgctgttcttctcctcgcgcggcatcgtctac
aagatgaaggtgtggcgcctgccgctcggcggcccgacctcgcgcggcaaggcgctggtc
aacctgctgccgctggaagcgggcgagcagatctcctcgatcatgccgctgccggagaac
gaggacagctgggccgacctcgatgtcatgttcgccactacccgcggcacggtccggcgc
aacaagctgtccgacttcacccaggtcaaccgcaacggcaagatcgccatgaagctcgac
gagggcgatggcatcatcggcgtctacacctgcacggaaaacgacgacgtgctgctgact
acggccgccggccagtgcatccgcttcccggtcacggacgttcgcgtcttcgccggacgc
aattcggtcggcgtgcgcggcatcaatctggccgaggacgatcatctcatctccatgtcg
atcctgcgtcacttcgaggcggatgccgaggagcgggtgacctacctgaagcgccgccgc
ctgatgcggggcgagaccgaagacgccggcgtggaggacgaggcggaagaggcgggtgca
gaaggccatctgagcctggagcgctacgccgaaatgagcgcggcggagcagatcatcctg
accgtgtcggaaaacggctacggcaagcgcacctcgtccttcgagtaccgggtcaccggt
cgcggcggcaagggcatcaccgccatggccgtgaccaggcgcaacggcccgctggtcgcc
gcgttcccggtcgaggacagcgaccagatcatgctggtcaccgacggcggccagctgatt
cgctgtccggtcgacggaatccgcgtcgccggacgcgcgacccagggcgtcatcgtgttc
aacacggccgaggacgagaaggtcgtggccgtggagcgcgtcagcgaggacgaggacggc
gacacgggagccgaaagcgaaaacggcggcgaagcctga
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