KEGG   Polymorphum gilvum: SL003B_2302
Entry
SL003B_2302       CDS       T01458                                 
Name
(GenBank) Sigma-54 factor interaction domain-containing protein
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
pgv  Polymorphum gilvum
Pathway
pgv02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pgv00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SL003B_2302
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pgv02022]
    SL003B_2302
Two-component system [BR:pgv02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   SL003B_2302
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 Mg_chelatase AAA_16 AAA_2 AAA_5 FleQ VpsR AAA nSTAND3 MCM P-loop_TraG
Other DBs
NCBI-ProteinID: ADZ70727
UniProt: F2J0P1
LinkDB
Position
complement(2433826..2435193)
AA seq 455 aa
MAYDILIVDDETDIREMIAGILDDEGYGTRTAADSDSALTAIKERRPSLVILDIWLQGSR
LDGLALLDVIREQDPDLPVVIISGHGNIETAVSAIKRGAYDYIEKPFKADRLILITDRAL
EASKLKREIRELKQRSGDTMRLVGESSAINQLRQTIERVAATNSRILISGPSGSGKELAA
RMIHDLSPRARGPFVAINAATITPERMEDELFGIEDASGGLRKVGALEEAHGGTLYLDEV
ADMPRETQGKILRVLVDQTFTRVGGATRVQVDIRILSSTAKDLERAIAEGAFREDLYHRL
GVVPLRVPGLAERREDVPILVRHFMEQISAASGLPMRRIGDDAMAVLQTHDWPGNIRQLR
NNVERLMILTRGDPESTITADLLPAEVGAMVPNLPTTGGGEHLMSMPLRDAREIFERDYL
QAQIKRFGGNISRTAEFVGMERSALHRKLKTLGLS
NT seq 1368 nt   +upstreamnt  +downstreamnt
atggcatatgatatcctgattgttgacgacgagaccgacatccgcgagatgatcgcgggc
attctcgacgacgagggctatggcacccgcacggccgctgacagcgacagcgcgctgacg
gcgatcaaggagcggcggccctcgctggtgatcctggacatctggctgcagggcagccga
ctcgacggcctggcgctgctcgacgtcatccgggaacaggatccggacctgccggtggtc
atcatctcgggccacggcaacatcgagaccgccgtctcggcaatcaagcgcggcgcctac
gactatatcgagaagccgttcaaggccgaccggctgattctgatcaccgaccgggcactg
gaagcgtccaagttgaagcgcgagatccgcgagctcaagcagcgctcgggcgacacaatg
cggctggtcggcgaatcgagcgcgatcaaccagttgcgccaaacgatcgaacgggttgcg
gcgaccaacagccggatcctgatctctggcccttcgggatcgggcaaggaactggccgcg
cgcatgatccacgacctgtcgccccgcgcacgcggccccttcgtcgcgatcaacgccgcc
accatcacgcccgaacgcatggaagatgaactgttcggcatcgaggacgccagcggcggc
ctgcggaaggtcggcgcgcttgaggaggcgcacggcggaactctgtatctcgacgaggtc
gccgacatgccgcgcgagacccagggcaagattctccgcgtgctggtcgaccagaccttt
acccgcgtcggcggcgcgaccagggtgcaggtcgacatccgcatcctgtcctcgacggcc
aaggacctggagcgtgcgattgcggaaggcgccttccgcgaggatctctatcatcgcctc
ggcgtcgtgccgctgcgcgtgcctggcctggccgagcgacgcgaggacgtgccgatcctg
gtccgccacttcatggaacagatttctgccgcctcgggcctgccgatgcgccggatcggc
gacgacgcgatggctgtcctgcagacgcatgactggccgggaaacatccggcagctgcgc
aacaacgtcgagcggctgatgatcctgacccgcggcgacccggagtcgaccatcaccgcg
gatctgttgcccgcggaagtcggcgccatggtaccgaacctgccgacgaccggcggcggc
gagcatctgatgtcgatgccgctgcgcgatgcgcgcgagatcttcgaacgcgactatctc
caggcgcagatcaagcgattcggcggcaacatttcgcggacggcggagttcgtgggcatg
gagcgatccgccttgcatcgcaaactgaagactttgggtttatcctga

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