Polymorphum gilvum: SL003B_2360
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Entry
SL003B_2360 CDS
T01458
Name
(GenBank) Nitrogenase cofactor synthesis protein NifS2
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
pgv
Polymorphum gilvum
Pathway
pgv00450
Selenocompound metabolism
pgv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgv00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SL003B_2360
Enzymes [BR:
pgv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
SL003B_2360
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
SL003B_2360
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ADZ70785
UniProt:
F2J0U9
LinkDB
All DBs
Position
complement(2504392..2505648)
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AA seq
418 aa
AA seq
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MTSASAQATTGPAPYDVEAVRRDFPILSRTVYGKPLVYLDNGASAQKPQAVIDAVTRAYS
FEYANVHRGLHYLSNTATENYEAARETVRRFLNAPSVDEIVFTRSTTEAINLVSYGLGPE
TFGPGDEIVLSIMEHHSNIVPWHFHRERHGAVLKWVYVREDGSFDLDAFADALSDRTRLV
AITHMSNVLGTVVPVKEVCRIAHERGIPVLVDGSQAAVHLPVDVQDIGCDYYAFTGHKVY
GPTGIGVLWAKMDRLKAMRPFCGGGEMIADVTESLVTYADPPHRFEAGTPPIVQAIGLGA
ALDYMEALGRDNIARHEAALCAYAHQRLGEINSLRIFGTAPGKGAIVSFEMQGAHAHDVS
TIIDRSGVAVRAGTHCAQPLLARYGVTSTCRASFGLYNTMEEVDVLAEALIKAHKFFA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgcatcggcacaggcaacaacgggtccggcaccctacgacgtcgaggcggtg
cgccgcgacttcccgatcctgtcgcgcacggtctacggcaagccgctggtctatctggac
aacggcgcctcggcccagaagccgcaggcggtgatcgacgcggtgaccagggcctattcg
ttcgaatatgccaacgtccaccgaggccttcactacctgtcgaacacggcgacggagaac
tacgaggcggcgcgcgagaccgtgcgccggttcctcaatgcgccgtccgtcgacgagatc
gtgttcacccgctcgaccaccgaggcgatcaacctcgtctcctatgggctggggccggag
accttcgggccgggcgacgagatcgtgctgtcgatcatggagcaccattccaacatcgtc
ccttggcatttccaccgggaacgccatggagcggtgctgaaatgggtctatgtccgcgag
gacggatcgtttgatctcgacgcctttgccgacgcgctgtccgatcgcaccaggctggtc
gcgatcacccacatgtcgaacgtgctcggcacggtggtgccggtgaaggaagtgtgccgg
atcgcccatgagcgcggcattcccgtgctcgtcgacggcagtcaggcggccgttcacctg
cccgtggacgtccaggacatcggctgcgactactacgccttcaccggccacaaggtctac
gggccgaccggcatcggcgtcctgtgggcgaagatggaccggctcaaggcgatgcggccg
ttctgcggcggcggcgagatgatcgccgacgtgaccgaatcgctcgttacctatgccgat
ccgccgcaccggttcgaggccggcacgccgccgatcgtccaggcgatcggcctcggcgcc
gcgctcgactacatggaggcgcttgggcgcgacaacattgcccgccacgaggcggcgctg
tgcgcctatgcccatcagcgcctcggcgagatcaactcgctgcgcatcttcgggacggcg
ccgggcaagggcgcgatcgtctcgttcgagatgcagggtgcccatgcccacgacgtgtcg
acgatcatcgaccggtcgggcgtcgcggtgcgcgccggcacccattgcgcccagccgctg
ctggcgcgctatggcgtgacctcgacctgccgcgccagcttcggcctctacaacacgatg
gaagaggtcgacgtcctggccgaagcgctgatcaaggcgcacaagttctttgcgtga
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