Polymorphum gilvum: SL003B_2510
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Entry
SL003B_2510 CDS
T01458
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pgv
Polymorphum gilvum
Pathway
pgv03030
DNA replication
pgv03430
Mismatch repair
pgv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SL003B_2510
03430 Mismatch repair
SL003B_2510
03440 Homologous recombination
SL003B_2510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgv03032
]
SL003B_2510
03400 DNA repair and recombination proteins [BR:
pgv03400
]
SL003B_2510
Enzymes [BR:
pgv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SL003B_2510
DNA replication proteins [BR:
pgv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SL003B_2510
DNA repair and recombination proteins [BR:
pgv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SL003B_2510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF294
DUF294_C
RNase_T
CBS
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ADZ70934
UniProt:
F2J2M0
LinkDB
All DBs
Position
2672568..2674727
Genome browser
AA seq
719 aa
AA seq
DB search
MRRGPVAGTSAAAPLIALDVVVLDTETTGLDVRHDRIVQIGAVRMHGAEIDETAVFEVTV
DPGIPIPEVASRIHGLADADVAGKPGLAAVMPDLVAFIGDAVVVGHSIHFDMAVLRHEAE
RHGFVWKEPRALDVALMAAGLDRELVDTSLDSLALGLGVTITGRHTALGDALATARVYAA
LQPKLLVGGVRTLGETETLCRRATGLIARQEDAGWFARPSERPDFALAVLRTGSQRAIDS
YLYRQRLVDVMSSPPIAIGADATLHEATRLMAARGIGCVIVDGTGGAPGIVTERDVLAVM
ADKGPEASGVIVRDIMSAPVITAPADTYLYRALGLMARRNLRYLGVTDAGGRLAGIFTLR
TLLRERALATLTVGDEIAEATRPRELARVQAALPSLASGLLADGLDARAVAGIIAAEGRA
MTARAAEIAEGELARAGYGPPPADYALLVLGSGGRGESLLAPDQDNALIIAGDYAGDLDS
PEDWFVRFATRVNEILDRAGIPYCKGGVMAKNRAWRRTLPEWLDQVRGWTHKPTPQALLN
VDIFYDFTPAHVSSQAGAELAETLRTEAVEIARGSLSMLRTMGESAGSHSPPLGMFGRIR
KDDAGRVDLKGGGLLPLVAGARAIALRHGVLALATPERILQASHKAGRSQADAELLADIH
GFLMRLILTQQIADIEAGVKPSNRIDVNRLGHQDHDQLRDALGRIELIRDILRDLLQGI
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtgaggcgcgggcccgtcgccggcaccagtgccgcggcgccgctgatcgcgcttgacgtc
gtcgtcctcgacaccgagacgaccggcctcgacgtgcgccacgaccgcatcgtccagatc
ggcgcggtgcgcatgcacggcgcggagatcgacgaaaccgcggtgttcgaggtcaccgtc
gacccgggcatcccgattcccgaggtggcgagccgcatccacggcctcgccgacgccgac
gtcgccggcaagcccggcctggcggcggtgatgccggatctggtcgccttcatcggcgat
gcagtggtcgtcggccattcgatccatttcgacatggcggtgctgcgccacgaagcggag
cgccacggcttcgtctggaaagagccgcgcgcgctcgacgtggcgctgatggccgccggg
ctcgaccgggaactggtcgacacctcgctcgacagcctcgccctcggcctcggggtgacg
atcaccggccgccacacggcgctcggcgacgcgcttgccaccgcccgggtctatgccgcg
ctgcagccgaagctgctcgtcggcggcgtgcgcacgctgggcgagacagaaacgctgtgc
cggcgcgcgaccgggctgatcgcccgccaggaggacgccggctggttcgcccggccgagc
gagcggcccgacttcgccctcgccgtgctgcgcaccggcagccagcgggcgatcgacagc
tacctctaccgccagcgcctcgtcgacgttatgagcagcccgccgatcgcgatcggtgcc
gacgcgaccctgcacgaggcgacccggctgatggccgcccgcggcatcggctgcgtgatc
gtcgacggcaccggcggcgcgccgggcatcgtgaccgagcgcgacgtgctggcggtgatg
gccgacaagggacccgaggccagcggcgtgatcgtgcgcgacatcatgagcgcaccggtg
atcacggccccggccgacacctatctctaccgtgccctcggcctgatggcgcggcgcaac
ctgcgctatctcggcgtcaccgacgctggcggccggctcgccggcatcttcaccctgcgc
accctgctgcgcgagcgcgcgctggccacgctgaccgtcggcgacgagatcgccgaggcg
acccgcccgcgcgagctggcccgggtgcaggccgccctgccctcgctcgccagcggcctg
ctcgccgacgggctcgacgcgcgcgccgtcgccggcatcatcgccgccgagggccgcgcc
atgaccgcgcgcgccgccgagatcgcggaaggcgaactggccagggccggctacggcccg
ccgccggccgactatgccctgctggtgctcggttcgggcgggcgcggcgagagcctgctt
gctcccgaccaggacaacgccctaatcatcgccggcgactatgccggcgacctcgattcg
cccgaggactggttcgtgcgcttcgcgacccgcgtcaacgagatcctcgaccgcgccggc
atcccctactgcaagggcggcgtcatggcgaagaaccgggcctggcgccggacgctgccg
gaatggctcgaccaggtccgtggctggacgcacaagccgacgccgcaggccctgctcaac
gtcgacatcttctacgacttcaccccggcgcatgtgtcgtcccaggccggcgccgaactc
gccgagacgctgcgcacggaggcggtcgagatcgcccgcggctcgctgtcgatgctgcgc
accatgggcgaaagcgccggctcgcacagcccgccgctcggcatgttcggccgcatccgc
aaggacgacgccggccgggtcgacctcaagggcggcggcctgctgccgctcgtcgccggc
gcgcgggcgatcgcgctgcgccacggagtgctggcgctggcaacgcccgagcgcatcctg
caggcgtcgcacaaggccggccgctcgcaggccgatgcggagctgctcgccgacatccac
ggcttcctgatgcggctgatcctgacccagcagatcgccgacatcgaggccggcgtgaag
ccgagcaaccggatcgacgtcaaccggctcggccaccaggaccacgaccagttgcgcgac
gcgctcggccgcatcgagctgatccgcgacatcctgcgcgacctgctgcaggggatctga
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