Polymorphum gilvum: SL003B_2809
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Entry
SL003B_2809 CDS
T01458
Name
(GenBank) Deoxyribodipyrimidine photolyase family
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pgv
Polymorphum gilvum
Brite
KEGG Orthology (KO) [BR:
pgv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgv03400
]
SL003B_2809
Enzymes [BR:
pgv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SL003B_2809
DNA repair and recombination proteins [BR:
pgv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SL003B_2809
Prokaryotic type
SL003B_2809
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ADZ71232
UniProt:
F2J5X8
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All DBs
Position
complement(3020864..3022306)
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AA seq
480 aa
AA seq
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MTTLVWFRQDLRIADNPALFEAAARGSVLPVFVLDEGPGDNTHPLGAASRWWLHHSLEAL
ARDLGRLVLLHGDPQRLIPELARAAGVGAVHWNRCYEPHAVRRDTALKAALIAAGVEVRS
FNAALLNEPWELETKTGGPFKVFSPYWRAALARPVATPLPRPPRLEIAAGQAGDRLDDWR
LRPTAPDWAAGWRDLWHPGEAGAAERLEHFLEAGLDGYATLRDRPDLSHVSRLSPHLHFG
EVSPRQVVARTRFAAGRTPGLERDADKFLAEIGWREFSHHLLYHFPRLPERNWKSTFDAY
PWRDSSGDLAVWQRGQTGYPMVDAGMRELWATGYMHNRVRMLAASFLVKHLRLDWRLGEA
WFRDTLVDADLANNAAGWQWVAGSGADAAPYFRIFSPVGQGRRFDPGGAYVRRWCPELAR
LPDDHVHAPFDAPAVVLKAAGVELGRTYPHPIVDHAAARAEALAGYEAVRRAGEAGAEGG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccctcgtctggttccgccaggatctgcgtatcgccgacaacccggcgctgttc
gaggcagcggcgcgcgggtccgtgctgcccgtcttcgttctcgacgagggccccggcgac
aacacccacccgctcggcgcggcgagccgctggtggctgcaccacagtctcgaagcgctc
gcccgcgacctcggccgtctggtgctgctgcacggcgacccgcagcggctgatcccggaa
ctcgcgcgcgccgccggcgtgggcgccgtccactggaaccgctgctatgagccccatgcg
gtgcgccgcgacaccgccctcaaggccgccctgatcgcggccggggtcgaggtccgcagt
ttcaacgcagcccttctgaacgagccgtgggaactggaaacgaagaccggcggcccgttc
aaggtgttttctccctactggcgcgccgcgcttgcccggcccgttgccacgcccttgccg
aggccgccgcggctcgagatcgccgcaggacaagccggcgaccggctcgacgactggcgg
cttcgcccgaccgcacccgactgggccgccggctggcgcgacctgtggcaccccggcgag
gcaggcgcggcggagcgactggagcacttcctcgaggccggcctggacggctacgcgacc
ctgcgcgaccgcccggatctgtcccatgtctcgcgcctgtccccgcatctgcatttcggc
gaggtctcgccgcgccaggtcgtcgcgcgcacccgcttcgccgccggcagaacgccgggg
ctggagcgcgatgcagacaagttcctcgccgagatcggctggcgggagttctcccatcac
ctgctctatcatttcccccgcctgccggagagaaactggaagtcgaccttcgacgcctat
ccctggcgcgacagctcgggcgatctggcagtctggcagcgcgggcagaccggctatccc
atggtcgatgccggcatgcgcgagctctgggcgaccggctacatgcacaaccgggtgcgc
atgctcgcggcgagtttcctggtcaaacacctgcgactcgactggcgcctgggcgaggct
tggttccgcgacacgctggtcgacgccgacctcgccaacaacgccgcaggctggcagtgg
gttgccggcagcggagctgatgccgcgccctatttccgcatcttcagtcccgtcggccag
ggtcgccgcttcgatccgggcggcgcctatgtccgccgctggtgcccggaactggcgcga
ctgccggacgaccatgtccacgcgcccttcgatgctcctgcggtggtgctgaaagccgca
ggcgtcgagcttggccggacctacccgcatccgatcgtcgaccacgcagccgcgcgcgcc
gaggctctcgcgggctacgaggcggtcaggcgggcaggggaggcgggcgcggaaggaggc
tga
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