KEGG   Polymorphum gilvum: SL003B_2839
Entry
SL003B_2839       CDS       T01458                                 
Name
(GenBank) CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
pgv  Polymorphum gilvum
Brite
KEGG Orthology (KO) [BR:pgv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pgv02048]
    SL003B_2839
Enzymes [BR:pgv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SL003B_2839
Prokaryotic defense system [BR:pgv02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    SL003B_2839
SSDB
Motif
Pfam: Cas3-like_C_2 Cas3_HD DEAD Helicase_C
Other DBs
NCBI-ProteinID: ADZ71262
UniProt: F2J608
LinkDB
Position
3050722..3053247
AA seq 841 aa
MFSALARLPGIRKRLTRLAATAEFLDIWIERLAWFVFLHDLGKANWGFQARIESTACAVG
HIAPIAGAYDAIVDQLDPVRMASWGDETMLGDWFHAVLSHHGKPWPQNPGPNKTACYKKY
WQVRGDYDPIAEVQRLREAADQFHGTAFRQCSPELPFTSPLIHALAGLVMLADWIASSDW
RASPDAAHLSTWAQRICCGIGFDPEPWRRTIVPDDFQAAFGFTPRTSQLDFVNAPGSLAI
LEAETGSGKTEAALWRFVERFRAGAVDGLYFALPSRTAAVQVHGRVERMIQALWPNDSPP
CILAVPGYLDDASGGGLPVAADMLDCPEEDTRAPTPWASEHPKRYFTGMIGVGTLDQALL
SVLRVKHAHMRSAALMRHMLVIDEVHASDAYMSRLTEILLRDHLAAGGEAALLSATLGGH
ARARYAAVGRLFNLNDLHLDDLSRSVTVPYPALTVQTSTGSETMALDPSGRSKRVSMAVE
CLIDDAHRIAGIAFAAAREGAKVLVVRNTVQGAVDVQMALENLAGQGAPELFRVSGDPAR
HPPVATLHHGRFAREDRRLLDAAVERAVGKARPPGGLVLVGTQTLEQSLDIDADYLITDL
CPMDVLLQRLGRLHRHETETDGSLRLRPDAFRDARALVLAPAEALAGLLTTVPRTRRNRH
GLGPRKDADGVPRGVYPDLLALEATRRLCLDQPVWTIPEMNRILVERALHPEAHDEILMT
MPAEQREAWERHWRDIDGVRFGDTMTARGAALDRRKPFMDLANALLPQEHLATRLGDEGY
ILKLPEATLGPFGTPISRIVIPAWWLAGIPDPSKISISICFENNNSNLPNAIPYSRLGLQ
R
NT seq 2526 nt   +upstreamnt  +downstreamnt
gtgttctctgcactggctagactgccgggtatccgaaaacgactcaccaggctggcagcc
accgcggagtttctcgacatctggatcgagcgattggcatggttcgtcttcctccatgac
cttggcaaggccaattggggctttcaggcgaggatcgagtccacggcgtgcgctgtcggc
cacatcgccccgatcgcgggcgcctatgacgccatcgtcgaccaactggatcccgttcgc
atggcctcctggggcgacgagaccatgctgggagactggtttcatgccgttctatcgcat
cacggtaagccttggcctcagaatccgggtcccaacaaaaccgcatgctataagaaatac
tggcaggtacgcggggattacgacccgatcgccgaggttcagcgactgcgggaagcagcg
gaccagttccatggaactgcgtttcggcaatgcagtcccgagcttcccttcacttccccc
ctgatccacgctctggcagggctcgtcatgctggccgattggatcgcctcctcggactgg
cgggcgagccccgatgcggctcacctcagtacgtgggcccagcggatctgttgtggcatc
ggattcgacccggagccttggcgtcggaccatcgtcccagacgattttcaggcggccttc
ggctttacgccacgcacctcccaactggacttcgtcaatgccccgggaagcctcgcgatc
ctggaggccgaaaccggatccggcaagaccgaagccgcgctctggcgatttgtggagcgg
ttccgcgcgggcgcggtcgatgggctgtacttcgcgcttcccagccgcacagcagccgtg
caagtgcacgggcgtgtcgagcgaatgatccaggcgctctggccgaacgactcccctcca
tgcattcttgccgtgcccggatatctcgacgacgcttcgggcggcggtctgcccgttgcc
gccgacatgctggactgcccggaagaggatacgcgcgccccgacgccctgggcctccgag
catcccaagcgctacttcaccggcatgatcggcgtcggaacgctagaccaggccctgttg
tccgttctgcgggtcaagcatgcgcacatgcgcagtgccgccctgatgcgccacatgctc
gtgatcgacgaagttcacgcgagtgacgcctacatgagccgcctgacggaaatcctgctg
cgggatcatcttgccgctggcggcgaggccgcattgctgtccgcgacactcggaggtcat
gcgcgtgctcgctatgccgcggtgggccgactgttcaacctgaacgacctccacctcgac
gacttgagcagaagcgttacggtcccctaccccgcgctgaccgttcagaccagcaccggc
agcgaaacgatggccctcgacccgagcggccgcagcaagcgcgtttcgatggcggtcgaa
tgcctgatcgatgatgcccatcgcatcgccggcattgcgttcgccgctgcgcgagagggc
gccaaggtcctcgtggtgcgcaacaccgttcagggcgcagtcgatgtccagatggcactc
gagaatctggcggggcaaggcgctcccgagttgttccgtgtctcgggcgatcccgctcgc
catcccccggtggcgacactgcaccatggccgcttcgcacgcgaggatcgccgattgctg
gacgcggcggtggaaagggctgtcggcaaggcgaggccgccgggaggactcgtgcttgtc
ggcacacaaacgctggagcagagcctcgacatcgacgccgattacctgatcaccgacctc
tgcccgatggacgtcctgcttcaaaggctgggacggctgcaccggcatgagaccgaaacg
gacggcagcctccggctccgtccggacgcattccgggacgcccgtgccctggtcctcgcc
ccggcggaggcattggccggactgttgaccaccgtgccgaggacacggcgaaatcgacat
ggtctcggcccgcgcaaggatgctgatggcgtcccgcgcggcgtctatccggacctgctt
gcgctggaagcgacgcggcgactgtgcctcgaccaaccggtctggaccatcccggagatg
aaccggatcctggtcgagcgcgcgcttcatcccgaggcgcatgacgagatcctcatgacg
atgcccgcagagcagcgcgaagcatgggagcggcactggcgagacatcgacggcgtccgc
ttcggcgataccatgaccgcccggggtgccgcgctggatcgaagaaagccgttcatggac
ttggccaacgccctcctgccgcaagaacatctcgccacgcgcctcggcgacgagggctac
atcctcaagctccccgaggccacccttggcccgttcggcacgccgatcagccgcattgtc
atcccagcctggtggctcgctgggattccagatccatccaaaatctccataagtatttgt
tttgaaaataataactcaaatctcccaaacgccatcccttacagccgcttgggcctgcag
cgatga

DBGET integrated database retrieval system