Polymorphum gilvum: SL003B_2986
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Entry
SL003B_2986 CDS
T01458
Name
(GenBank) ATPase protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pgv
Polymorphum gilvum
Brite
KEGG Orthology (KO) [BR:
pgv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgv03400
]
SL003B_2986
DNA repair and recombination proteins [BR:
pgv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
SL003B_2986
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
AAA_22
DUF87
AAA_10
FtsK_SpoIIIE
TrwB_AAD_bind
ResIII
AAA_30
T2SSE
nSTAND3
AAA_7
AAA_19
CbiA
Motif
Other DBs
NCBI-ProteinID:
ADZ71409
UniProt:
F2IV78
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All DBs
Position
3210602..3212206
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AA seq
534 aa
AA seq
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MDSDDKIFIGGSDKSEFLTLKLANRHGLITGATGTGKTVTLQILAEGFSNAGVPVFCADV
KGDLSGIALAGEPKDFLLKRAAQIGLTDSYRFTDFPVALWDLYGTQGHPVRTSISEVGPL
LLARLLELNDTQEGVLTIAFQLADDEGLLLLDLKDLRAVLAHVGERAQELSRVYGNVSTA
SIGAIQRRLLVLEREGAEHFFGEPALDIRDFLRTARDGRGVINVLAADRLMHAPRLYATF
LLWLLSELFEELPEVGDPDRPRLVFFFDEAHLLFTDAPKALLTRIEQVVRLIRSKGVGVY
FVTQNPLDVPDTVLAQLGNRIQHALRAYTPREQKAVRAAAQTFRPNPALDTERVITELGV
GEALVSTLEGKGVPSVVQRTLIRPPSSRIGPISETERQALVRSSPVFGLYDRSVDRHSAY
EMLAQRAADEQRREAEARARDDGSRRTATGFRLPDFGTDPGTGSGRGSGRGSGTGSGRSR
APGGTSGGTSGRVPRSGSRDTALEAGLKSAARSVGSSLGRALVRGVLGSLKRGF
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
gtggattcggacgacaagatcttcatcggcggcagcgacaagagcgaattcctgacgctg
aagctggcgaaccgccacggcctcatcaccggcgccaccggcacgggcaagacggtgacg
ctccagatcctcgccgagggcttctcgaacgccggcgtgccggtgttctgcgccgacgtg
aagggcgatctgtccggcatcgcgctcgccggcgagccgaaggacttcctgctcaagcgc
gctgcccagatcggcctgaccgacagctaccgcttcaccgacttcccggtcgccctgtgg
gacctctacggcacccaggggcatcccgtacgcacctccatctccgaggtcggccccctg
ctgctggcgcgcctgctcgagctcaacgacacgcaggagggcgtgctcaccatcgccttc
cagctcgcggacgatgaaggcctgctgctgctcgacctgaaggacctgcgcgccgttctc
gcccatgtcggcgagcgcgcgcaggagctgtcgcgcgtctacggcaacgtctcgaccgcc
tccatcggcgccatccaacgccgcctgctggtgctggaacgcgagggcgccgagcacttc
ttcggcgagccggcgctcgatatccgcgatttcctgcgcacggcgcgcgacgggcgcggc
gtcatcaacgtgctggccgccgaccggctcatgcacgcgccgcggctctatgccaccttc
ctcttgtggctgctgtcggagctgttcgaggaactgcccgaggtcggcgacccggaccgc
ccgaggctggtcttcttcttcgacgaggcgcacctgttgttcaccgacgcccccaaggcg
ctgctgaccaggatcgagcaggtagtccggctgatccgctccaagggcgtcggcgtctat
ttcgtcacccagaacccgctcgatgtgcccgacaccgtcctcgcccaactcggcaaccgc
atccagcatgcgctcagggcctacactccgcgcgaacagaaggcggtgcgcgccgccgcc
cagactttccggcccaatccggcgctagacaccgaacgcgtcatcaccgaactcggcgtc
ggcgaggcgctggtgtcgacgctggaaggcaagggcgtgccctcggtcgtgcagcgcact
ctgatccggccgccgtcgtcacgcatcggtccgatcagcgagacggaacggcaggcgctg
gtccgctcgagcccggtgttcgggctctacgaccgcagcgtcgaccgccattctgcttac
gagatgctggcccagcgcgccgccgacgagcagcgccgcgaggccgaggcacgggcgcgc
gacgacggcagccggcgcaccgccaccggcttccggttgcccgacttcggcacggaccca
ggcacgggctctggtaggggctctggtaggggctctggcacgggctctggccgcagccgc
gcgccaggcggcacttcaggcggcacttcgggccgcgtgccgcgcagcggatcgcgcgac
accgccctcgaggcggggctcaagtccgccgcccgcagcgtcggctcgtcgctcggccgg
gcgctggtgcgcggcgtcctcggctcgctcaagcgcggcttctga
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