Polymorphum gilvum: SL003B_3305
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Entry
SL003B_3305 CDS
T01458
Name
(GenBank) tRNA (Uracil-5-)-methyltransferase superfamily
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pgv
Polymorphum gilvum
Brite
KEGG Orthology (KO) [BR:
pgv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgv03009
]
SL003B_3305
Enzymes [BR:
pgv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
SL003B_3305
Ribosome biogenesis [BR:
pgv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SL003B_3305
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
MTS
Cons_hypoth95
TRM5-TYW2_MTfase
Methyltransf_31
PDGF
Motif
Other DBs
NCBI-ProteinID:
ADZ71727
UniProt:
F2IYB5
LinkDB
All DBs
Position
3567817..3569052
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AA seq
411 aa
AA seq
DB search
MTDATLELTITGLGHRGDGLADGPDGPLFVAGALPGERVRARVAGQRATMVDLLQPSPER
ITPVCRHVERCGGCNVQHLAPDPYLAWKRDLVIEALADRGIAAEVGATVAARPATRRRAA
LTAVRAGHKILLGYHEKASHRLVDVTECPVLVPAITAALPGLKTLAAALMPRRGEVRIAV
LASEAGLDVAVGNAAPGTEKKLVALTALAADLDLARLSVDGETIVERRAPVLTMGRASVV
PPPGAFTQATAEAETALAGLVAQALGPAKRAADLFAGIGTFTLRMAETASVHAVEAEAAA
LAALDRAIRVPRGLKQVTLERRDLFRRPLMAAELAPFDAVVFDPPRAGAQAQAEQLAQSR
VARIAAVSCNPATLARDLRILIDGGYRLLSVTPVDQFLFSTHVEAVAALER
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgcgaccctcgaactgaccatcaccggcctcggccaccgcggcgacggcctc
gccgacgggccggacggccctctgttcgtggccggtgccctgcccggcgaacgggtgcgg
gcgcgggtcgccggccagcgggcgacgatggtcgacctcctgcagccgagcccggagcgg
atcactcccgtctgccggcatgtcgagcgctgcggcggctgcaacgtgcagcacctggcg
cccgacccttatctcgcctggaagcgcgacctggtgatcgaagcgctggccgaccggggc
attgccgccgaggtcggcgccaccgtcgccgcgcggccggcgacgcgccggcgagcggcg
ctgacggcagtgcgcgccgggcacaagatcctgctcggctaccacgagaaggccagccac
cggctggtcgacgtcacggaatgcccggtgctggtgccggcgatcaccgccgcgctgcca
ggtctgaagacgctggccgcggcgctgatgccgcgccggggcgaggtgcggatcgccgtg
ctggcaagcgaggccgggctcgacgtcgcggtcggcaacgccgcgccgggaaccgagaag
aagctggtggcgctgaccgcactcgccgccgacctcgacctcgcccggctgtccgtcgac
ggcgagacgatcgtcgagcggcgcgcgccggtgctgaccatggggcgggcgagcgtggtg
ccgccgcccggcgccttcacccaggccaccgccgaggcggagaccgcccttgccgggctg
gtcgcgcaggcgctcggcccggccaaacgggccgccgacctgttcgccggcatcggcacc
ttcacgctccggatggccgaaacggcctcggtgcacgcagtcgaggccgaggcggccgcc
ctcgccgcgctcgaccgggcgatccgcgtgccgcgcgggctgaagcaggtgacgctggag
cggcgcgacctgttccgccggccgctgatggccgcagaactcgcgcccttcgacgcggtc
gtcttcgatccgccgcgcgccggcgcgcaggcgcaggccgagcagctggcgcagtcgcgg
gtggcgcggatcgccgccgtgtcctgcaacccggcgacgctcgcccgcgacctgaggatc
ctgatcgacggcggctaccggctcctatcggtgacgccggtcgaccagttcctgttctcg
acccatgtcgaggcggtggcggcgctggagcggtag
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