Polymorphum gilvum: SL003B_3428
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Entry
SL003B_3428 CDS
T01458
Name
(GenBank) RNA pseudouridylate synthase family protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pgv
Polymorphum gilvum
Brite
KEGG Orthology (KO) [BR:
pgv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgv03009
]
SL003B_3428
Enzymes [BR:
pgv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
SL003B_3428
Ribosome biogenesis [BR:
pgv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SL003B_3428
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ADZ71849
UniProt:
F2J015
LinkDB
All DBs
Position
3700448..3702136
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AA seq
562 aa
AA seq
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MTDRKSPSRSRGNSPRGPRTASGSAAAKGGARGAGAPKNRKEKQGSGAKPPRPEAGTRKP
RPQPAPATAAADGAPSGPDAIPARDGERIAKVMARAGLCSRRDAEAWILAGRVAVNGKIL
ESPALTVTYDDEIVVDGQPLPQKERTRLWLYHKPRGLVTTARDPEGRPTVFDSLPKDLPR
VLAVGRLDINTEGLLLLTNDGGLARVLELPATGWLRRYRVRAYGKIEQSQLDSLADGIAI
DGILYGTIEAVLDKQQGDNVWLTVGLREGKNREVKRVLEHLGLSVNRLIRLSFGPFQLAD
LGEGEVREIRGRVLRDQLGDKLAEAAGADFEAPVLTQAEPDKPLKKKENIQKSRAGGEWM
SAREGAAATRTGGRRSASDEAPERRRKGAGNPPETRRPSGKSQDRPQDRPQKVSPRSRFR
LTSEPRPRSRAPERDEAPRPPARRIWSEEGLVEDKQQDTRLARKARPERTERPEPRDERR
REDRPRSERPRSERPFRDRAGGDERPPRGGPKGPGRGGAGKGPRTGPGKGPGRSGMRSEG
GGSGRGGGHGPGRGGGKPRGRP
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaggaaatccccctcccggtcccgcggcaacagcccgcgcgggccccgtacc
gcatccggctcggcagccgccaagggcggcgccagaggcgccggagcgcccaagaatcgc
aaggaaaaacaaggatctggcgcaaagccgccacggccggaggcgggcacgcgcaagccc
cgcccgcagcccgcgccggcgacggcggcagccgatggcgcgccttccgggcccgacgct
atccccgcccgcgacggcgagcgcatagccaaggtgatggcgcgcgccgggctctgctcg
cgccgcgacgccgaggcctggatcctcgccgggcgcgtcgccgtcaacggcaagatcttg
gaaagccctgcccttacagtgacttacgacgacgagatcgtggtcgacgggcaaccgctg
ccgcagaaggaacgcacccggctgtggctttaccacaagccgcgcgggctggtcaccacg
gcccgcgacccggaggggcgtccgacggttttcgacagtcttcccaaggacttgccacgg
gttcttgcggtcggccggctggacatcaacaccgagggcctgctgcttctgaccaacgac
ggcggcctggcgcgggtgctggaattgcccgccaccggctggctgcgccgctaccgggtc
cgcgcctacggaaaaatcgagcaaagtcaactcgatagcctcgccgacgggatcgccatc
gacggcattctctacggcaccatcgaggccgttctggacaagcagcagggggataacgtc
tggctgacggtcggcctcagggagggcaagaaccgcgaggtcaagcgcgtcctggagcac
ctcggactgtccgtcaaccgcctgatccgactgtctttcggtccgttccagctggccgac
ctcggcgagggcgaggtcagggagatccgcggccgggtgctgcgcgaccagctgggggac
aagctggcggaggccgcgggggcggatttcgaggcgccggtcctgacccaggcagaacca
gacaagcccttgaagaagaaagagaacattcagaaaagtcgcgccggaggcgagtggatg
agcgcccgcgagggggcggcggcgacgcgcaccggcggccgccggagcgcgtccgacgaa
gcgccggaaaggcgccggaaaggcgccggaaaccctcctgagacccgccgaccttccggc
aaatcccaggacaggccccaggaccggcctcagaaggtgtcgccgcgcagccgcttccgc
ctgaccagcgaaccgcgcccgcgctcccgcgcgcccgaacgcgacgaggccccgcgcccg
ccggcacggcggatctggagcgaggagggcctggtcgaggacaagcagcaggacacgcgg
ctcgcccgcaaggcgaggccggagcgcaccgagcgaccggagcctcgcgacgagcggcgt
cgggaagatcggccccggagtgagcggccccggagcgagcggccgttccgcgaccgagcc
ggcggcgacgagcgtccgccgcgcggcggaccgaagggtcccgggcggggcggggcaggc
aagggcccgcgcaccggacccggcaaaggcccggggcggagcggcatgcgaagcgaaggc
gggggctcgggtcggggcggtgggcacggtcccggccggggcggcggcaagccgcgcggg
cggccgtga
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