Polymorphum gilvum: SL003B_3455
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Entry
SL003B_3455 CDS
T01458
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pgv
Polymorphum gilvum
Pathway
pgv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SL003B_3455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgv03019
]
SL003B_3455
03110 Chaperones and folding catalysts [BR:
pgv03110
]
SL003B_3455
03029 Mitochondrial biogenesis [BR:
pgv03029
]
SL003B_3455
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgv04147
]
SL003B_3455
Enzymes [BR:
pgv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SL003B_3455
Messenger RNA biogenesis [BR:
pgv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SL003B_3455
Chaperones and folding catalysts [BR:
pgv03110
]
Heat shock proteins
HSP60 / Chaperonin
SL003B_3455
Mitochondrial biogenesis [BR:
pgv03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SL003B_3455
Exosome [BR:
pgv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SL003B_3455
Exosomal proteins of other body fluids (saliva and urine)
SL003B_3455
Exosomal proteins of breast cancer cells
SL003B_3455
Exosomal proteins of colorectal cancer cells
SL003B_3455
Exosomal proteins of bladder cancer cells
SL003B_3455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
LCIB_C_CA
SHOCT-like_DUF2089-C
KH_PARP14_2
Motif
Other DBs
NCBI-ProteinID:
ADZ71877
UniProt:
F2J042
LinkDB
All DBs
Position
3733132..3734772
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDVKFGTDAREKMLRGVDILANAVKVTLGPKGRNVVLDKAFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVREVASKTNDVAGDGTTTATVLAQSIVKEGAKAVAAGMNPMDLKRGI
DLAAAEAVKYLVANSKTITTSEEVAQVGTISANGDTQVGKDIAEAMQKVGNEGVITVEEA
KSLETELEVVEGMQFDRGYLSPYFVTNAEKMLAELEKPYILLHEKKLSNLQAMLPILESV
VQSGRPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEDLGIKLENVTLDMLGKAEKVSISKENTTIVDGAGAKEDIQGRVAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEIEVKEKKDRVDDALNATRAAVEEGIVPGGGTALL
RAKSAVEKLTSDNADIQAGIKIVLRALESPIRQIVENAGVEGSIVVGKIQENNDPSFGFD
AQSETYVNMIQAGIIDPTKVVRTALQDAASVAGLLITTGAMVAELPKKEAPAMPAGGMGG
MGGMDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaggacgtaaagttcggcaccgacgcccgcgagaagatgctccgcggcgtc
gacattctggccaacgccgtgaaggtcaccctcggcccgaagggccgtaatgtcgttctc
gacaaggccttcggcgctccgcgcatcaccaaggacggcgtgtcggtcgccaaggaaatc
gagctggaagacaagttcgagaacatgggcgcccagatggtgcgcgaagtggcgtcgaag
accaacgacgtcgccggtgacggcaccacgaccgcgaccgttctcgcccagtcgatcgtc
aaggaaggtgccaaggcggttgccgccggcatgaacccgatggacctgaagcgcggcatc
gacctcgccgccgccgaggccgtcaagtacctggtcgccaactccaagaccatcaccacc
tcggaagaagtggcccaggtcggcaccatttcggccaacggcgacacccaggtcggcaag
gacatcgccgaggcgatgcagaaggtcggcaacgagggcgtgatcaccgtcgaggaagcc
aagtcgctcgagaccgaactcgaggtcgtcgagggcatgcagttcgaccgcggctacctg
tcgccctacttcgtgaccaacgccgagaagatgctcgccgagctggagaagccctacatc
ctcctgcacgagaagaagctgtccaacctgcaggccatgctgccgatcctggaatccgtc
gtgcagtccggccggccgctgctgatcgtcgctgaagacgtcgaaggcgaggcactcgcc
acgctcgtcgtcaacaagctgcgtggcggcctgaagatcgccgccgtcaaggctccgggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgaccggcggcacggtg
atctccgaagatctcggcatcaagctcgagaacgtcaccctcgacatgctcggcaaggcc
gagaaggtgtccatctccaaggagaacaccaccatcgtcgacggcgccggcgccaaggag
gacatccagggccgcgtcgcgcagatcaaggcgcagatcgaggagaccacctcggactac
gaccgcgagaagctgcaggagcgtctggccaagctggcgggcggcgtggccgtcatccgc
gtcggcggcgcgaccgaaatcgaggtgaaggaaaagaaggaccgcgtcgacgacgccctg
aacgcgacccgcgcggccgtggaagaaggcatcgtcccgggtggcggcaccgcgttgctg
cgcgccaagtcggcggtcgagaagctgacctccgacaacgccgacatccaggccggcatc
aagatcgtcctgcgcgcccttgagtccccgatccgccagatcgtcgagaacgccggcgtg
gaaggctcgatcgtggtcggcaagatccaggagaacaacgatccgtcgttcggcttcgac
gcccagtccgagacctacgtcaacatgatccaggccggcatcatcgacccgaccaaggtc
gtgcgcacggccctgcaggacgccgcctcggtggccggcctgctgatcaccactggcgcc
atggttgccgagctgccgaagaaggaagcaccggcgatgccggccggcggcatgggcggc
atgggcggcatggacttctaa
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