Polymorphum gilvum: SL003B_3602
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Entry
SL003B_3602 CDS
T01458
Symbol
traA
Name
(GenBank) Ti-type conjugative transfer relaxase TraA
Organism
pgv
Polymorphum gilvum
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MobA_MobL
Motif
Other DBs
NCBI-ProteinID:
ADZ72024
UniProt:
F2J1W3
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Position
complement(3902136..3904241)
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AA seq
701 aa
AA seq
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MAIYRCEFKIISRAAGHKAVAAAAYRASEKIVDQTYGETHDFTRKSNVKAAFILAPDNAP
DWMQDRAKLWNAVEAAERRKDAQLSREVLLSLPHELTDQQREALVRQFVNERFVSRGMIA
DVAIHGHSPSGDERNYHAHVMLTTRALTLGTFGPKERSWNGKEFLHETRVAWAEAQNRLF
ERLGLNLRVDHRSLANQGVDREPEPKLGPTATEALRNGEPEKAERTIGDYEAVKDRNADR
ERLKEQLEVIDLALARLDKAQGDRAAEAVAELALRHSRSFEALQDAQRMAQLTARRAAMA
ELRSAVHDARAAHDAYRDELKPGFIRRLGEIVTLKGRAAKAERNAKLAAFKMEQDRQLNL
LRARLRAEGRSLLADHADARDRLREAQAGERDALARQHEQDRTREVDALIERMKARHAQA
EGRAVSQGGSSPSAATPVARPVAEIPEAVPSSELQPDDTHPDLDPARLKAMNEEVDRIVA
RVLDELGHGDQGGGSDSGDKGDGKSGSSSSGGGAKPRATVLPDTGQPSTFKRKPPAGQQG
LDPLPDQSVPGFDAESLKRMDAKTDAVVARLRDELEAKERGKPAPLPVAKVDPARVRGGT
PVAPGGQPPTVKPPAAPPGSTPEAKPAGALPGDTGRPRERDRKPGLIPSDGLKPADERTP
LTQEELEKLARREKAIRMKKAREARERRARERDRDRGGPER
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtggcgatctatcgctgcgagttcaagatcatctcgcgcgcggccggccataaggccgtc
gcggcggccgcctatcgcgcctccgagaagatcgttgaccagacctatggcgagacgcac
gacttcacccggaagtcgaacgtcaaggccgccttcattctcgcacccgataacgccccc
gactggatgcaggaccgcgccaagctctggaacgcggtcgaggccgccgagcgtcgcaag
gacgcccagctctcccgcgaggtcctgctctccctgccgcacgaattgaccgaccagcag
cgtgaggctctggtccggcaattcgtgaacgagcggttcgtcagccggggcatgatcgcg
gatgtcgccatccacggccattccccgtcgggcgacgagcgcaactaccatgcgcacgtc
atgctgacgacccgcgcgctcacgctcggcaccttcggccccaaggagcggtcctggaac
ggcaaggagtttctgcatgagacgcgggtggcctgggccgaggcgcagaaccggctcttc
gagcggcttggcctcaatctccgcgtcgatcatcgcagccttgccaatcagggtgtggac
cgcgaaccggagccgaagctcggcccgaccgcaacggaggcgttgcgcaatggcgagccg
gagaaggccgagcgcacgatcggcgactacgaggcggtcaaggaccgcaacgccgaccgt
gagcgcctgaaggaacagctcgaagtgatcgaccttgcgctcgcccggctggacaaggcc
cagggggatcgcgcggccgaggccgtggcggagctggcacttcgccacagccggagcttc
gaggcccttcaggacgcgcagcgcatggcgcagcttaccgcccgccgtgcggcgatggcg
gagctgcgcagcgccgtccatgacgcccgcgcggcccatgacgcctaccgggacgagctg
aagccgggcttcatccgccgccttggcgagatcgtcaccttgaaggggcgtgctgccaag
gccgagcgcaatgcaaagctcgccgccttcaagatggagcaggaccgccagctcaacctg
ctgcgggcgcggctcagggccgagggccgcagcctgctggccgatcatgccgacgcgcgg
gaccggctgcgcgaggcgcaggccggggagcgcgatgcgctcgcgcgtcagcatgagcaa
gaccggacgcgcgaggtcgatgccctgatcgagcgcatgaaggcgcgccatgcgcaggcc
gagggccgcgcggtgtcgcagggaggatcttcaccttcggccgcaacgccggtcgcccgt
ccggtcgccgagataccggaggccgtcccgtcgtcggagcttcagcccgatgacacccat
ccagacctcgatcccgcccgcctgaaggcgatgaacgaggaggtcgatcgcattgtcgcg
cgcgtcctcgacgagctcggtcacggcgatcaggggggcggctcagacagcggcgacaag
ggcgacggcaagtccgggtcgtcatcgtcgggcggcggcgcgaagccgcgcgcgaccgtg
ctgcccgataccggccagccctcgaccttcaagcgcaagcccccggctggacagcagggt
ctcgatccgctgcccgatcagagcgtgccgggattcgatgccgaatccctcaagcgcatg
gacgcgaaaacggacgcggtggtggcgcgactcagggacgagctggaggccaaggagcgc
ggcaagcccgcaccgctccccgtcgccaaggtcgatccggccagggtgcgcggtgggacg
cctgtcgcccccggcggccagccgccgacggtcaagccgcctgcggcgcctcccggatcg
acgccggaggcgaagccggcgggtgcgctgccgggagatactggccggccgcgcgagcgc
gacaggaagcccggcctgatcccttctgacggattgaagccggcggacgagcgcacgccc
ctgacgcaggaggagcttgagaagctggcgcgccgcgagaaggccatccgcatgaagaag
gcgcgcgaggcgcgtgagcggcgcgcccgcgagagagaccgcgatagaggcgggccggag
cggtaa
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