KEGG   Polymorphum gilvum: SL003B_3748
Entry
SL003B_3748       CDS       T01458                                 
Name
(GenBank) Type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pgv  Polymorphum gilvum
Brite
KEGG Orthology (KO) [BR:pgv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pgv02048]
    SL003B_3748
Enzymes [BR:pgv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     SL003B_3748
Prokaryotic defense system [BR:pgv02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   SL003B_3748
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII T1RH-like_C DEAD
Other DBs
NCBI-ProteinID: ADZ72169
UniProt: F2J3N3
LinkDB
Position
complement(4060455..4063670)
AA seq 1071 aa
MTFNAAEKHQSQVPALQLLVALGFKPLSQEEALRLRGGRLRNVVLDDVLAEQLMRINRFT
HRGREYGFDLEDAHEAMRRLKPTPDRLKGLRGTNQDIYDTLVLGTTITKSIDGDSKSYSF
RYIDWEQPENNVFHVTAEFSVERTASSQTKRCDIVAFVNGIPILVIENKRPTESLKKADS
QLIGYQNEDNIPQLFHFAQLLTAMNRNEARYATVGTPRKFWQTWRDEEDTDEAIAPFANR
VLTAVEKDAIFSGDFAGARAYFDAMAAEGDRAVTVQDRTVYALCRPERLLDLIRRFTVFD
GGVRKVARHQQFFGIRRAVETVKQHDVSGARKGGVIWHTQGSGKSLTMVMLGRSLALERS
IENPRIIIVTDRDDLDKQIKDTFKSCDLEPVRATSGSHLLELVQNKAPLVTTIINKFDTA
LRNSKLADDDPNIFVLVDESHRTQTGRYGGHSQFAAKMRRLLPKACYLGFTGTPLLKKEK
NTLSTFGRLIHRYAIDEAVADGAVVPLLYEGRLVEQQVSGAVIDRWFDKISEGLTDSQKA
DLKRKFSRMDALAKTDQAIRAKAFDISEHYRQHWQGTGFKAQLVAPSKAAAVRFKEVLDE
IGHVSSAIVISPPDENEGNEEVDQESKDLVRRFWSQMMARYKTEEEYNRQIIDAFKGSGD
PEILIVVSKLLTGFDAPRNTVLYVCKSLKEHNLLQAIARVNRLYEDGGTEKEFGFIVDYE
GLLGELDSALTTYSAFEGYEAADLAGTVHDVREEIRKLPQLHDQLWDLFKPVRNKKDMEQ
FEQHLADEALRHDFYARLKAFSRCLHISLSSDKLFDVFDETKVDALKRDWKQFSELKRSV
QLRYQETVDVREFEPKIQKLLDDHVVAMPAETIIEVVNINDPDALKAVVEETGVSEASRA
DRIASATRRAITEKMDEDPTFYKQFSELLEETIRAYREKRLSEREYLNSVVDLASKVARK
DRGRDVPESIRGDEDAQAFFGILDGQLKTNGDEPVASDDSAAIAQQIIEIVKSHLIVDIW
SNEVAQNNLRNAIDDYFFDVLRDERGIDLPVEVLDDLELKIMDLARARFAA
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgaccttcaacgccgccgagaaacaccagtcccaggtgccagcactgcagctgctggtg
gcgctggggtttaagccgctctcgcaggaggaagccctgcgcctgcgcggcgggcgcctg
cggaacgtggtgctggacgacgtgctcgccgagcagctgatgcgcatcaaccgcttcacg
caccggggccgcgagtacggcttcgacctcgaggacgcgcacgaggcgatgcggcggctc
aagcccacgcccgatcgcctgaaggggctccggggcaccaatcaggacatctacgacacg
ctcgtcctcggcacgacgatcacgaagtccatcgacggcgattcgaagagctactcgttc
cgctacatcgattgggagcagcccgagaacaacgtcttccacgtcactgcggagttctcg
gtcgagaggaccgcgtcgagtcagaccaagcgctgcgacatcgttgcgttcgtcaacggt
atcccgatcctggtgatcgagaacaagcggccgaccgagagcctgaagaaggcggacagc
cagctgatcggctaccagaacgaggacaacatcccgcagctcttccatttcgcccagctg
ctaacggccatgaaccgcaacgaggcgcgctacgcgacggtcgggacgccgcggaagttc
tggcagacctggcgcgacgaagaggataccgacgaggccatcgcgcccttcgccaaccgc
gtgctcaccgcggtggagaaggacgccatcttctccggtgatttcgcgggcgcgcgcgcc
tatttcgacgcgatggccgccgagggcgaccgcgcggtcacggttcaggaccggacggtg
tacgcgctgtgccgccccgagcgactgctcgatctcatccgccgtttcaccgtattcgat
ggcggcgtccgcaaggttgcgcgccaccagcagttcttcgggatccggcgcgccgtcgag
accgtcaagcagcatgatgtgagcggcgcccgcaagggcggcgtgatctggcatacccag
ggctcgggcaagtcgctgaccatggtgatgctggggcgctcgcttgctctcgagcgcagc
atcgagaacccgcggatcatcatcgtcacggaccgcgacgatctcgacaagcagatcaag
gacaccttcaagtcctgtgacctcgaaccggttcgggcgacgagtgggtctcatcttctg
gagctcgtccagaacaaggctccgctggtcaccacgatcatcaacaagttcgacacggcg
ctgaggaacagcaagctggcggacgacgacccgaacatcttcgtgctggtcgacgagagc
cacaggacgcagacggggcgctacggcggccacagccagttcgccgccaagatgcgacgc
ctcctgcccaaggcctgctacctcggcttcaccggcacgcccctgctgaagaaggagaag
aacacgctttcgaccttcgggcggctgatccaccgctacgccatcgacgaggcggtcgcc
gacggtgccgtcgttccgctgctgtacgaaggacggcttgtcgagcagcaggtctcgggc
gcagtcatcgaccgctggttcgacaagatcagtgagggcttgactgacagccagaaggcc
gacctcaagcgcaagttctctcggatggatgcactggccaaaaccgaccaggccatccga
gccaaggcgttcgacatctccgagcactatcgccagcactggcaggggaccggcttcaag
gcgcagctcgttgccccctcgaaggccgcggccgtccgcttcaaggaggttctcgacgag
atcggccatgtctcgagtgcgatcgtcatctccccgccggatgagaacgagggcaacgag
gaggtcgaccaggaatccaaggacctcgtccgccgcttctggtcgcagatgatggcgcgg
tacaagaccgaggaagagtacaatcgccagatcatcgatgccttcaagggttccggcgat
ccggagatcctgatcgtcgtctccaagctcctcaccggcttcgacgcgccccggaacacg
gtcctttatgtctgcaagtccctgaaggaacacaatctcctgcaggcgattgcacgggtg
aaccggctctacgaggacggcggaacggagaaggagttcggcttcatcgttgattacgag
gggctgctcggcgagctggacagcgccctgacgacgtacagcgcctttgaaggctacgag
gccgccgacctcgcagggacggtgcacgatgtccgtgaggagatccgcaagctgccccag
ctgcacgaccagctctgggatctcttcaaaccggttcgaaacaagaaggacatggagcag
ttcgagcagcaccttgctgacgaggcgctgcgccacgatttctacgcgcgcctcaaggcg
ttcagccggtgcctgcacatctcgctctcgtccgacaagctgttcgatgtcttcgacgag
accaaggtcgatgccctgaaacgcgactggaaacagttctccgaactcaagcgctcggtc
cagctccgctaccaggagacggtcgatgtccgcgaattcgaaccgaagatccagaagctc
cttgatgaccacgtcgtggcaatgccggcggaaaccatcatcgaggtggtcaacatcaac
gatcccgacgcgctgaaggccgtcgtcgaagagacgggggtgtccgaggcctcgagggcc
gatcgcatcgccagcgcgacccggcgggcgatcaccgagaagatggatgaggacccgacg
ttctacaaacagttctccgagctgctcgaagagaccatccgcgcctaccgcgagaagcgg
ctgtccgagcgcgaatacctgaacagcgtcgtggacctcgcgagcaaggtcgcgcgcaag
gatcgcggccgcgatgttccagaaagcatccggggcgatgaggatgcgcaggcgttcttc
gggatccttgacggtcagctcaaaacaaacggcgatgagccggtggccagcgacgattcc
gcagcgattgctcaacagatcatcgagatcgtcaagtcacacctgatcgtggacatctgg
tcgaacgaggtggcccagaacaatctgcgcaacgccatcgatgactacttctttgacgtg
cttcgcgacgagaggggcatcgacctccccgtggaggtgcttgacgacctcgagctgaag
atcatggacctcgcccgggcccggttcgcagcatga

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