Polymorphum gilvum: SL003B_4191
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Entry
SL003B_4191 CDS
T01458
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pgv
Polymorphum gilvum
Brite
KEGG Orthology (KO) [BR:
pgv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgv03032
]
SL003B_4191
03036 Chromosome and associated proteins [BR:
pgv03036
]
SL003B_4191
03400 DNA repair and recombination proteins [BR:
pgv03400
]
SL003B_4191
DNA replication proteins [BR:
pgv03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SL003B_4191
Chromosome and associated proteins [BR:
pgv03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
SL003B_4191
DNA repair and recombination proteins [BR:
pgv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SL003B_4191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_bac_1
XPC-binding
Motif
Other DBs
NCBI-ProteinID:
ADZ72608
UniProt:
F2J6X5
LinkDB
All DBs
Position
4495509..4495814
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AA seq
101 aa
AA seq
DB search
MIKSELVQRIAEQNPHLYQRDVENIVNAILDEITEALMRGDRVELRGFGAFSVKNRPARV
GRNPRTGQKVDVDEKYVPFFKTGKEMRERLNGGVDHGEDED
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagtcagagttggtccagcgcatcgcggaacagaacccgcatctctatcagcga
gatgtggagaacatcgtgaacgcgatcctggacgagatcaccgaggccctgatgcgcggc
gaccgcgtggagctcaggggcttcggcgccttttcggtcaagaaccgcccggcccgcgtc
ggccgcaatccgagaaccggccagaaggtcgatgtggacgagaaatacgtccccttcttc
aagaccggcaaggagatgcgcgagcgcctgaacggtggcgtcgaccacggcgaggacgaa
gactga
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