Pectinophora gossypiella (pink bollworm): 126367265
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Entry
126367265 CDS
T09293
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw04382
Cornified envelope formation
pgw04512
ECM-receptor interaction
pgw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126367265
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126367265
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
126367265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgw04147
]
126367265
00536 Glycosaminoglycan binding proteins [BR:
pgw00536
]
126367265
Exosome [BR:
pgw04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
126367265
Glycosaminoglycan binding proteins [BR:
pgw00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126367265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
126367265
NCBI-ProteinID:
XP_049866652
LinkDB
All DBs
Position
1:complement(9596486..9608324)
Genome browser
AA seq
1810 aa
AA seq
DB search
MAVRVLWLVAALAPIIGVNTQEDRYEWNDIRESRWPPAEWSPLPSAEPTRVNTYGLSRRP
DLPPSPQPPQPPQASGFNFNNYAAYDPVTRQRTSERNCTSPGCCQPKCFAEKGNRGFPGV
RGPPGPPGAPGHVGPEGPQGSKGQKGQMGPQGPRGPKGERGKPGQQGFVGLSGPPGPQGE
PGVAGLPGRDGCNGTDGEPGPLGPKGNQGPRGFPGMKGGKGDKGEPATTGRYPKGQKGEP
GADGLSGRQGPVGPSGPPGLQGPKGNTGPMGFAGAKGDKGSKGIKGQSIQGDKGDRGDRG
DRGPSCPPVTLPFEHKGATKGIQGDMGPKGEKGEPGRMGDKGDTGPMGEPGLPGQMGSKG
EKGIRGNPGDRGRDGMYGAPGPMGQKGDRGNDGLPGLSGRPGSKGEPGLDGAPGPRGLKG
IQGPSGGLTGSRGPPGPPGPRGYDGPAGPRGTDGKPGDRGEPGPMGPPGGQGEPGNPGIE
GPAGHKGEKGEPGLNGAQGEIGPRGYDGPMGPQGPRGPKGEDGFSIPGNKGNSGLPGHPG
DKGQKGERGYPGLRGVPGNSTLGTPGSPGEMGPPGEKGNPGQPGFDGLPGNPGQKGDLGG
RCNECWPGGPGPKGDRGSDGNPGERGERGPAGPVGLPGERGMDGINGSPGAPGALGDRGD
DGPIGPPGPKGADAIIPSNLVKGPPGAKGNQGERGYPGAKGERGRDGPKGDRGPVGMPGT
KGDQGLMGPPGESGIPGSDGSSGLPGMPGLSIKGEKGLPGDFGLKGDKGFPGRIGIKGEP
GQCPANLQELTKGDRGAPGMPGPEGPEGDAGEKGDKGFPGRPGLKGDMGLPGRQGPVGPR
GLPGPRGDKGDMGPMGFPGTPGGPGDRGFPGKPGFKGDKGEVGPSMPGPPGPPGLTGRKG
EPGLRGIPGTPGNDGPPGPMGLPGEKGEPGFPGRPGFPGQPGQKGDAGPVGPPGVPGTPG
LPGRDGPKGQQGFPGIAGTPGVIGLPGQKGEPGMQGPDGPKGFPGARGRPGAPGIAGSDG
IPGEKGDKGNIGYPGSPGSPGLMGPSGPMGAPGLKGDQGFEGPPGQPGRPGDRGEKGDRG
FTGPSGPKGEPGFASDKGQKGEPGILGLRGSDGLPGLDGAKGDKGNAGLPGFGLQGPAGP
KGDIGMPGMDGFPGQPGPKGDRGYPGFRGPKGDTGPTGEPGQPGLPGLDGTPGQQGDIGP
SGPEGLKGDKGESGLPGRDGFDGLKGEQGPMGPPGSPGPFGSPGPKGDRGPPGPSIDVKG
EKGDIGPQGIPGAPGPKGERGLDGAQGIQGEKGDRGYTGMKGEMGRIGLTGEKGDRGPAG
PDGIPGLTIKGEKGLPGTAGKHGRAGLPGAPGEKGDQGLPGLPGPSGRPGTPGAPGPPGE
KGDQGREGLAGPPGFDGTPGREGPPGIMGAKGDKGDRGATGFGQPGDKGDQGLPGPPGYQ
GQKGDKGDRGLNGLDGQPGPMGPTGPKGDRGFPGRIGLQGAIGLKGDKGEPANIVYGPKG
EPGPRGPRGNDGLPGRNGEPGSPGLNGSPGAKGDRGFPGQSGPPGPPGPMGLQGLQGERG
EIGRTGSTGPPGPPGAPCTTTDYLTGILLVRHSQTEYVPQCESGHVKLWDGYSLLYIDGN
EKSHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTNKPIPMMPVEGNEI
IQYISRCVVCEVPSNVIAVHSQSLAVPDCPGGWSELWIGYSFVMHTGAGAQGGGQALSSP
GSCLEDFRAAPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAQPDRQTFKSGRLLERVS
RCAVCIKNAT
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atggcggtccgcgtactatggttggtggctgcgctagcgcccataataggagtgaacacg
caagaagatcgttatgaatggaatgacatacgcgaaagtcgatggccaccggcggagtgg
tcgccgctgccttcggcggagcccacccgagtgaacacttacggactgtcgcggaggccg
gacttgccaccatcaccgcagcccccgcagccgccgcaggcctctggattcaacttcaac
aactatgccgcttacgaccctgttaccagacagcgcacctccgaaagaaactgcacctcg
cccggctgttgccagcccaaatgcttcgcagaaaaaggaaaccggggattccctggtgtg
cgcggacccccaggcccaccaggagcaccgggtcacgtaggtcccgaaggtccccaaggt
tctaaaggtcaaaagggacaaatgggtcctcaaggtccgcgtggacctaagggtgaaaga
ggaaaacctggtcaacaaggtttcgttggtttgtctggtccaccgggtccgcaaggtgag
ccaggtgtggccggtttgcccggtagagacggctgtaatggtacagatggtgaacccggt
ccgctgggtcctaagggaaatcagggaccgcgtggttttccgggtatgaaaggtggtaaa
ggagacaaaggagaaccggccactactggtcgttatcccaaaggacagaaaggagagcct
ggagcggatggtttatcaggaagacaaggtcctgtggggccttctggtccacctgggcta
caaggaccaaaaggaaatacgggtcctatgggattcgcgggtgccaaaggtgacaaaggg
tctaaaggtataaaaggacaatcaattcaaggagataaaggtgacagaggtgatcgagga
gacagaggtcccagttgtcctcctgtcacattaccatttgaacataaaggtgccaccaaa
ggtattcaaggagatatgggtcccaaaggagaaaaaggtgaacctggtagaatgggcgac
aaaggtgatactggtccgatgggtgaaccgggattaccaggacaaatgggatcaaaagga
gaaaaaggaatcaggggaaaccctggtgatcgtggtcgagatggaatgtatggtgctcct
ggcccaatgggacaaaaaggtgaccggggcaatgatggtttgcccggtctttctggaagg
cctgggtcgaagggtgaacctggattagatggagctcctgggccacgcggacttaaaggt
atacaaggtccgtctggtggccttactggatcaagaggtccacctggaccccctggccct
agaggttatgacgggcccgctgggcctagaggaactgatggaaaacctggagacagaggt
gaacctggcccaatgggacctcctggtgggcaaggagaacccggtaatcctggaatagaa
ggcccagcaggccataaaggcgaaaagggagaaccaggcttaaacggggctcaaggtgag
atagggccacgaggttatgatggacctatgggaccacaaggaccaagagggcctaaagga
gaagatggattcagtatacctggtaacaaaggaaacagcggtttacctgggcatccaggg
gacaaaggtcaaaagggtgaaagaggatatccaggtttacgaggtgtgccaggaaactct
actttaggtaccccgggaagtcccggcgaaatgggtccacctggagaaaaaggtaaccca
ggccaacctggatttgacggtcttcctggaaatcctggacaaaaaggagatttaggtggg
cgctgtaatgaatgttggcctggtggcccgggacctaaaggagaccgtggttcagatggc
aaccccggagaacgcggtgaacgtggaccagcgggaccagttggtcttcctggtgaacga
ggaatggacggtatcaacggtagccctggagcacccggtgcgctgggcgaccgcggagat
gatggacctatcggcccaccaggtcccaaaggagccgatgctattataccatctaacctt
gtgaaagggcctcctggcgcaaaaggaaatcaaggtgaacgcggttacccaggagccaaa
ggtgaaaggggacgcgacggacctaaaggtgaccgtggcccagtaggcatgcctggcacg
aagggcgatcaaggactaatgggtccacctggagaaagtggaatacctggaagtgacggc
tcatcaggactaccgggtatgccaggcctttccatcaaaggagaaaaaggtttgccggga
gattttggactaaaaggagataaaggcttcccaggaagaattggtattaagggtgaacca
ggtcaatgtccagcaaatttacaagaattaaccaaaggtgatagaggagcaccaggaatg
ccaggtcctgaggggcccgaaggcgatgctggagaaaagggtgataaaggtttcccgggt
cgccctggacttaaaggagacatgggattgccaggcagacagggtccagtgggacctcgt
ggtcttccaggacctagaggcgataaaggtgacatgggtcctatgggcttcccaggaacg
ccaggaggaccaggtgatagaggattcccgggcaaaccaggctttaagggagataaagga
gaagtcggaccatccatgcctggaccgccaggccctccaggtctgaccgggcgtaaaggt
gaaccaggattgagaggaatacccggcacaccaggtaatgatgggccacctggccctatg
ggactacctggagaaaagggagagccaggatttcctggacgtccaggtttcccaggtcaa
ccgggtcaaaaaggtgacgctggtccagttggacctccaggagtaccaggaacacctgga
ttaccaggaagagatgggcctaaaggtcagcaaggttttccaggtatagcaggaacacca
ggtgttattggtttaccaggccaaaaaggagaaccaggaatgcaagggcccgatggtcca
aagggtttccctggagcaagaggccggcctggcgctccaggtattgccggatctgatggt
atcccaggtgaaaaaggtgacaaaggtaatattggttatccgggttcgcctggttcgccg
ggactcatgggaccttcagggccaatgggagcaccagggttgaagggagaccaaggtttc
gaaggaccaccaggacaaccaggaagaccaggagacagaggtgaaaaaggagacagaggt
ttcacaggtccgtccggtcccaaaggagaaccaggatttgcttctgacaaaggacagaaa
ggagaaccgggtatactaggtcttagaggatctgatggattacctggactagacggagcg
aagggtgataagggtaatgcaggattacctggcttcggattacaggggcccgctggacca
aagggtgatatcggtatgcctggtatggatggcttccctggtcagccagggccaaaagga
gatcgtggctatccaggttttcgaggaccgaaaggtgacactggccctacaggtgagccg
ggacaaccagggttacctggtctagacggtactcccggacaacaaggtgatattggaccg
tcaggaccagagggcttaaaaggtgacaagggtgaatctggacttcctggacgagatgga
ttcgatggtcttaaaggagaacaaggcccgatgggacctcctggttcacctggtccattt
ggtagtccgggacctaagggagacagaggcccacctggcccgtctatagacgtcaaagga
gaaaaaggagacatcggcccgcagggtatacctggagctcctggtcctaaaggagaaaga
ggattggatggagctcaaggtattcagggtgaaaagggtgaccgtggatatactggaatg
aaaggggaaatgggtcgaattggattaacgggagaaaaaggagaccgcggcccagctgga
cctgacggcataccgggtttaacgatcaaaggagaaaagggattgcccggcaccgcggga
aaacatggtcgtgctggtctaccgggagcacctggtgaaaagggtgaccaaggcttacca
ggtctgccaggaccatctggccgccccggcacccctggcgcgccgggaccaccgggcgaa
aaaggtgaccaaggtcgtgaaggtctcgcaggaccacccggttttgatggcactccaggt
cgcgaaggacctcctggtattatgggagctaagggtgacaaaggtgatagaggtgctact
ggattcggacaaccgggcgacaaaggagatcaaggacttccaggtccacctggttatcaa
ggtcaaaaaggtgacaaaggagatcgcggcttaaacgggctcgatggccaaccaggcccc
atgggccccacaggtccaaaaggtgacagaggattccctggaagaataggtctgcagggc
gccataggtttgaaaggtgacaaaggtgaaccagcaaatatcgtgtatgggcccaaagga
gagccagggccacgtggacctcgaggtaacgacggactgccaggaagaaatggggagcct
ggttcaccaggtctaaacggtagcccgggtgcgaaaggcgatcgtggattccctggtcaa
tccggtcctccgggaccgccagggccgatgggcctgcaaggcctacaaggtgagcgagga
gagatcggtcgtacaggatccacaggccctcctggtcccccgggtgcaccgtgtacaaca
acggactatctgaccggaatattgttagttcgccacagtcaaactgaatatgtgccacaa
tgtgaatccggacacgtcaaactctgggacggttattcgttattgtacatcgatggcaat
gaaaaatcccacaatcaagatttaggttacgctggatcctgtgtaagaaagttcagtacg
atgcctttcctcttctgcgacctcaacgatgtatgcaattacgctagcagaaacgatcga
agttactggttgtcgacaaacaaacctataccaatgatgcctgtggaaggaaatgaaata
atacagtacatttcaagatgtgtagtatgtgaagtgccatctaacgtaattgctgtgcac
agtcaatcacttgccgtacccgactgtcccggaggttggagcgaactttggataggatac
agttttgttatgcacacgggtgctggagcgcagggaggcggccaggcgctgtctagtccg
ggatcgtgccttgaagacttccgcgcggcgcctttcatagaatgtaacggagagggtggc
acttgtcatcactttgccaacaaactaagtttctggctcacaaccatagaagacagccaa
caatttgcgcagccggatcgacagacattcaaatcaggacgtctcctcgagcgcgtgtca
cgatgcgccgtatgcatcaagaacgctacttaa
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integrated database retrieval system
