Pectinophora gossypiella (pink bollworm): 126367433
Help
Entry
126367433 CDS
T09293
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgw03400
]
126367433
DNA repair and recombination proteins [BR:
pgw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
126367433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
126367433
NCBI-ProteinID:
XP_049866892
LinkDB
All DBs
Position
6:7508753..7518793
Genome browser
AA seq
1954 aa
AA seq
DB search
MEGLTQNEKIIWTCWEEKSARDVVREAAAKGTHIALAIKYLMHKNNWNEATANEWFLAEV
KAWTVQLLLRKQIFKVLHILNKVKINPEEHLMTLAQESPQIEYRDFIVENLEKLSKDIKP
ENLPRWQNFKNHWNLLRYLEKSFEVDGTFKQNKVFGVGNNRVFVNESEIKPLTIEKIEKY
PPEWKSKIATALFFDSFEFSLLEFSSSLEVWNHLVQHNKAMILVRWINVQTSEVVRDMNA
RYNFFNNDSFVKKLLNVDTKGFSFNVLDKLDEVFRAWSITDKMIASIANSNCFAFTKMCI
YDTLCSYGIVNEDERNNLYQIIARLARTQNLKIIDDIFTESCATISKQHFYVELAKYCVK
HKLYKVLTMCVEGNILDTDLSEVEQEAKECIELWLLFKSIEQTSDRQSHVVPVYKTCQQI
AKDDIDNYISANPHLVLGMILLEDNAKLFDIFSKEEYLQFKDFKLPNMGFKDKLPHLHNA
FKKYTDKNQMYESKDVNVYQLLSGYRGLDVSKIFEFQLVNQNTYSLISDKPDRRSLGSLL
ANDVDVNASSIKTLSQKFMDMPDFANEKLMKRYGYVAKLNHVYYLKQYRPCNASQAFVAQ
QYQTYNRLQDKSIKSACCEAHALALQNWSDPAMTACAISFVAMIGCNPTRCRVHMSAAKM
IKQHLLRLGETHEKASKTVNEYMSKLIQSNDEAAREMLRYLEEITMQTLHEKQEASGKVE
MSTVLYESQTMVKFAVLHDLPLPEMQLREFVRNDCWFNFLLFGDVFRYPLAQMLQLSQEF
SNKSYAEHLKYIMLHRNAEEGSDKEFKSVANNGQRRASRMNSVEVSPSPTLSGVFEFPAP
AAVGRELWEVSAACHGPEDPPAALLRAADHCREPLLVLIASCYEPNAVDVLWPQWVLASL
PYSAQVQEALKSELAQHCSPAEQIQRVAELCLREGYVNTLHESMLIFMPESPLTLLTSFL
YRCIRLRTFDSDTSKLLSSFLQHCQRKYSVDTSALPVQLSKEALQSVAVSLVKIAMSQSF
DSAFHQREFLRCLAVAQFEKGLTVPTPNFVTLYEILQISMETSLVVNISKMLEDDAQSYL
SQCIEMYTANRNYDVALKIAKLAGLSVNEILMAEWTHKHEMLHMKEDAVEDKDLTLFVAQ
CSEAFKHASVTFNKATEFLIYHVNEISDTAQKFYCYRIIMSWFEENLEYGQRREEIEHMM
WNAYFSNESQNEIFLNSYQSTLHFILNGQKDPTLSKKIGLVNAEKPFSMLLSEIEIESDV
GNIENVVLLEEPDAIDNWRRVISQLLELKLLVEAFRLSALFKTPPEFRYRPPVCPVQIIR
TCLKLAEGTCSPYELPQELRLVISSPFSQSKLSISETSDASFEELVVIQEKQDPSTEGVP
HLAAREEADRLSALDALAVRSGITVAKQVASYFRIALQIGWSYSGVLKYQHHAVDFINLV
SGRARMSLANLVFRTFNIPSKQVAEYLCREMVAAIISPHLVKTSTFRQKEHFQYTLWGYA
LNSDIEMFLNMRPDACSQIGRFILDHLMAFQKIYKATTVAKLPENTLDDSCLDVETLIDE
EFQNVEGDEVESIVTEEGTLVSADTESVFSVSTVYTVGAKMTRDTRRNLFDVVTRRDVHI
RYEVKSNIRKITKGAKLSTKQVNIISIELLVLAHECFSCACDTEGVAVSLVSAQALTARL
AAARSWRLMVRLLCGLARYTDCAYVFQTLRDNHQFEFLLGQFDYMLGNQPDKIAEFKQGL
LDFLKIHCPGDTDTYIMVALHFNMYAEAANVKRKQALDLIDDLEKMALDAAKAVSKKPFQ
PPLWLQIHDNVQTRLLLETALNHCTDASELYLQGGCMGFAGEMAILAQQIALQISLLNAS
PTRLILNRSTEQLYRLVSEYLSFMEGLVLLSGRGGEAWHELAYRRAMANDQAYLRDMAAY
RPDIAHSFLNRYKAEKNKTSVSHAAMTELRNLCR
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtctgacccagaatgagaagatcatctggacatgctgggaggagaagtcagca
cgggatgtggtccgggaggcggctgctaagggcacacacatcgccctcgcgatcaaatat
ctcatgcacaagaacaattggaatgaggccacagctaatgagtggttcttagccgaggtt
aaagcatggacggtgcaacttctccttcgaaagcaaatattcaaagttctccacatcctc
aacaaagttaagataaaccctgaggagcatctaatgactttagcgcaggagtctccacag
atagagtacagagacttcattgtagagaacttggaaaaactatctaaagacattaagcct
gaaaatcttcccagatggcaaaatttcaagaatcattggaatctcctcaggtatcttgaa
aagtcatttgaagttgatggcactttcaaacaaaataaggtgtttggtgttggaaacaat
agagtatttgtgaatgaaagtgaaatcaaaccattgacaatagaaaagatagagaaatac
cctccagaatggaaaagcaaaattgcaacagcattgttctttgatagttttgaattttct
ttactggaattttcatcatcattggaggtatggaatcatctggtacaacacaacaaagcc
atgattctggtgcgctggataaatgtccaaacatcagaagtagtaagggacatgaatgca
cgctataacttcttcaacaatgatagctttgtcaagaaacttctaaatgttgacaccaag
ggcttcagctttaatgtccttgacaaattagatgaagtatttagggcctggtcaatcact
gacaaaatgattgcaagcattgccaacagcaactgctttgctttcactaagatgtgcatt
tatgacacattgtgctcttacggcattgttaatgaagatgagcgcaataatttgtaccaa
atcatagcaagactagcacgcacacagaatctgaagattattgatgatattttcacagag
tcttgtgctactatatcgaaacagcacttttatgtagaactggctaagtactgtgtgaag
cataaattgtacaaagtgctgaccatgtgtgttgaggggaacatacttgatacagacttg
tctgaggtagaacaagaggctaaggaatgtattgaactatggctgctttttaaaagcatt
gaacaaacttcagacaggcagagtcatgtggtgccagtgtacaagacttgtcaacaaatt
gccaaagatgatattgataactatatctctgctaatccacatttagttttaggaatgatt
ttattggaagataatgctaaactgtttgatatattttcaaaggaggaatatttgcaattc
aaagattttaaactaccaaatatgggctttaaagacaaacttccacatttgcataatgct
tttaagaaatatactgataagaatcaaatgtatgaatcgaaggatgttaatgtctatcaa
ttactttcgggttatcgaggactggatgtatctaagatatttgaatttcagttagtaaat
cagaacacttacagtttgataagcgataagccagatagacgtagtctgggtagcttactt
gcgaatgatgtggatgtcaatgccagcagcataaagaccttgtcgcagaaattcatggat
atgccggattttgccaatgagaagcttatgaagagatacggttatgtcgcaaagttgaac
catgtttattacttgaaacagtaccggccttgtaatgcaagtcaggcgtttgtggcgcag
cagtaccaaacgtacaatcggctgcaggataaaagcataaagagcgcgtgttgtgaggct
catgcattggctttacaaaattggtccgatcccgctatgactgcgtgcgcaatatctttt
gtagcgatgattggatgtaaccctacaagatgcagggtccatatgtcggctgctaaaatg
atcaaacaacatttgttacgtttgggcgaaacacacgagaaagcgagtaaaacagtgaat
gagtatatgtcgaaactcattcagagtaatgatgaagccgcaagagaaatgctgcgatac
ttggaggaaatcactatgcaaacactacatgaaaagcaggaagcgagtgggaaggtagag
atgtcaacagtgctgtacgaatctcagacaatggtgaagtttgctgtgttgcacgatctg
cctttgccagagatgcaattgagagaattcgtgaggaatgactgttggttcaacttcttg
ctgttcggtgacgtgtttcgttacccactggctcagatgctgcagctgtcacaggagttt
agtaacaagtcgtatgcggaacacttgaaatacattatgttgcatcgaaacgcggaggaa
ggttcagataaagagttcaagtctgttgcaaacaatgggcagaggagggcttcaagaatg
aattctgttgaagtgagtccgagtccgactttgagcggcgtgttcgagttcccggcgccg
gcagcggtggggcgcgagctgtgggaggtgtcggccgcatgtcacggccccgaggaccca
cccgccgcgctgctgcgagctgccgaccactgccgggaaccactgctcgtgctcatcgct
agctgctatgagccaaacgcagtcgacgtgctgtggccgcagtgggtgctagcatcgctg
ccatatagcgcgcaggtacaggaagcgctgaagtctgagctggcgcaacattgctcgccg
gcggagcagatacaacgcgtggcagaactctgcctgcgagagggatacgtcaacacactg
catgaatccatgctcatctttatgccggaaagtccactgactctactgacatcgtttctg
taccggtgcattcggttgcgcaccttcgactctgacaccagcaaactgctcagcagcttt
cttcaacactgccagaggaaatatagtgtcgacacaagtgcgttacccgtgcagttgtct
aaggaagccttgcagtcggtggctgtctcgctcgtgaagatagcaatgagtcagagcttt
gacagcgcattccatcagagagagttcctgaggtgtctcgccgtcgcgcagtttgaaaaa
ggattgacggtaccaacaccgaatttcgtaacgctatacgaaatcctacagatatcaatg
gagacatctctagtagtcaacatctcgaaaatgctggaagatgacgcacaaagttacctt
tcacaatgcattgaaatgtatactgctaataggaattatgacgtggctttgaagatagcc
aaacttgctggactgtctgttaatgagatccttatggctgaatggacgcacaagcatgag
atgttgcatatgaaggaagatgccgtagaggataaggacttgactctgttcgtcgcacag
tgtagtgaagccttcaagcatgcctcagttaccttcaacaaggcgacagagtttctcata
taccatgtcaacgagatatccgatacggcccagaaattttactgctacaggataataatg
agctggtttgaggaaaacttagaatatggacagagaagagaagagatcgaacacatgatg
tggaatgcctacttctcgaatgaatctcaaaatgaaattttcttgaacagttatcagagc
actttgcatttcatactcaatggacaaaaagacccgacgctctcgaagaagataggtctc
gtcaatgctgagaaaccgttctcgatgttgttgagtgagattgagattgagtctgatgtg
gggaatattgaaaacgtggtacttttagaggagcctgatgcaatagacaattggaggcgg
gtgataagccagttactagagttgaaactcttggtggaagcgtttaggctgtcggctttg
ttcaagactccacctgaattccggtacagacctccggtgtgtcctgtacagattataagg
acgtgtttgaagcttgcagaagggacctgttcaccttatgagttgcctcaagaactaaga
ttggtgatttcttcaccattctcacagagtaaattgtcaatttcagagacatcagacgcg
agcttcgaagagttagtagtgattcaggagaagcaggacccgagtaccgaaggcgtgcca
cacttagctgctcgcgaggaggctgacagattgtccgcacttgacgcgctcgccgtacgc
agcgggatcactgtagctaaacaggtggcgagttacttccgcatagctctgcagatcggg
tggagctactcgggtgtgttgaagtaccagcaccacgcggtcgacttcatcaacctggtg
agcggccgcgcgcgcatgtctcttgccaacctcgtgttccggaccttcaacataccctcc
aaacaggtcgcagaatacttgtgtcgtgagatggtagccgctataatatcaccgcattta
gtgaaaacatcaacattccgacagaaagagcatttccaatacactttgtggggttacgca
ctcaattccgacatcgaaatgtttctgaacatgcgtccggacgcttgtagccaaataggg
aggttcattctagaccacctcatggcattccagaagatatacaaagctactacagtggcg
aaacttccagaaaacactttagacgacagttgtcttgacgtcgaaactcttatagacgag
gagttccaaaatgtagaaggcgatgaggtggagtctatagtgactgaagaagggaccctc
gtatcagctgatacggaatccgttttctcagtatctacggtgtatactgttggtgctaaa
atgaccagagacactcgaaggaatctgttcgatgtggtgactagaagagacgtacacatc
agatacgaagtgaagtctaatatccggaagattactaaaggagcgaagctgtctactaag
caggttaatataatctcaatcgagctgctggtgctggcgcacgagtgtttctcgtgcgcg
tgtgacacggagggcgtggcggtgtcgctggtgtcggcgcaggcgctcacggcgcggctg
gcggcggcgcgttcatggcggctcatggtgcgcctgctgtgcggcctggcgcggtacacc
gactgcgcttatgtgttccagacactacgcgacaatcatcagtttgaattcctcctgggt
caattcgactacatgcttggcaaccaaccggacaagattgcggagttcaaacaaggattg
cttgacttcctcaagatacactgtcccggagacacggacacctacatcatggttgctcta
cacttcaacatgtacgctgaagccgcgaacgtgaaacgaaaacaagctcttgatcttata
gatgacttggagaaaatggccttagacgctgctaaagccgtatctaagaaacccttccaa
ccgccgctatggcttcaaatacatgacaatgtgcaaactaggctgttactagagactgcg
ttgaaccattgtacggatgcgtcagagttgtatctgcaaggtggttgtatgggatttgcc
ggggaaatggcgattcttgcacagcagatagcgttgcaaatatcgctgctaaacgcgtcg
cctacaaggctgatactgaatagaagtacagaacagttgtatcggcttgtcagcgagtat
ttgagcttcatggaaggtctggtgttactgtcggggcgcggcggcgaggcgtggcatgag
ttagcttacaggcgtgctatggccaatgatcaggcctacctacgcgatatggccgcctac
cgccctgacatcgcacatagcttcctgaacagatacaaagcggagaaaaacaagacctca
gtgtcgcacgccgccatgaccgaactccgcaacttgtgccggtga
DBGET
integrated database retrieval system
