Pectinophora gossypiella (pink bollworm): 126367684
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Entry
126367684 CDS
T09293
Name
(RefSeq) chromodomain-helicase-DNA-binding protein Mi-2 homolog isoform X1
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126367684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgw03036
]
126367684
Chromosome and associated proteins [BR:
pgw03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
126367684
Chromatin remodeling factors
NuRD complex
126367684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHDCT2
SNF2-rel_dom
CHDII_SANT-like
CHDNT
Helicase_C
DUF1087
PHD
Chromo
HDA2-3
ResIII
PHD-1st_NSD
PHDvar_NSD
HTH_Hrp3
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
126367684
NCBI-ProteinID:
XP_049867284
LinkDB
All DBs
Position
6:4070803..4086707
Genome browser
AA seq
1971 aa
AA seq
DB search
MASDEEVDGSFAGDEDVEEGEGQNENSGESDEAPPKEDEDYSPEDGRKKKKGKKRKARGE
EKKGRKKKKKRRNESEEEDDFSMEMEAEGDSDYALSAVSSKKSRKGRGSKHATPVTPAAS
DSGSGMPTVEEVCASFGLTDVDIQYSDADLENLTSYKLFQQHVRPLLVKENPKVPVSKLM
MLVAAKWRLFCESNPHLSSGSQNMGSEENTNTSTASDYAPKARPGRPPKDSKNDEAGDEQ
EEEEEEEASDEGTPAPRKRGRKAKHAAGATPRGKPGRKPKVPTLKIKFSKRKRTSSVSIN
SEEEQEGSAGANSDSDAEFEQMLAEAEEPKPATAAAPEDPAAVKEEDPNAPPQPKKKAKT
KIGNKSKKKKKLKTTSKFPDGAEGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPEL
EETPEGRWSCPHCEAEGNQDQEDDDEHQEFCRICKDGGELLCCDSCPSAYHRFCLNPPLE
EVPDGEWRCPRCSCPPLEGKVAKILTWRWKEQPAKSKAPRSREFFVKWHERSYWHCSWIS
EIQLDVFHPLMYRYYMRKSDPEEPPKLEEPLDERDNRFKRIQKEKRHDQESDEKALEEKY
YRYGVKPEWLIVHRVINHRTSRDGTTYYLVKWRDLSYDQATWESEHADIAGLKQAMDYYS
DMRAYITSEGKTKGSKGKKPGRKSKNRDNLDEDESSSGGQPKPRRYNPPPDRPTTNLNKK
YEDQPPFVYETGMQLHPYQLEGLNWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLFKE
GHCKGPFLVSVPLSTIINWEREFELWAPDLYCITYVGDKDSRAVIRENELTFDDGANRGG
RPSKIKSQVKFNVLLTSYELVSIDATCLGSIDWAVLVVDEAHRLKSNQSKFFRLLAGYHI
NYKLLLTGTPLQNNLEELFHLLNFLNKDKFNDLAAFQNEFADVSKEEQVKRLHEMLGPHM
LRRLKADVLKNMPTKSEFIVRVELSPMQKKYYKYILTRNYEALNPKSGGQTVSLLNVMMD
LKKCCNHPYLFPVAAEEAPLGPHGNYDTQALIKASGKLVLLAKMLKLLKEQGHRVLIFSQ
MTKMLDILEDFLEGEGYKYERIDGGITGTIRQEAIDRFNAPGAPQFVFLLSTRAGGLGIN
LATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMML
THLVVRPGMGGKGANFTKQELDDILRFGTEELFKEEEGKEEAIHYDDKAVGELLDRSKEG
IEQKESWANEYLSSFKVASYSTKEGDGEEEVDTEIIKQEAENTDPAYWIKLLRHHYEQHQ
EDQARTLGKGKRVRKQVNYNDGSVAQTENREDTTWQDNGSDYNSDFSQGSEDDKEDDDFD
EKNDNGDLLSRRSKRRLERREERDRPLPPLLARVGGNMEVLGFNARQRKSFLNAIMRYGM
PPQDAFNSQWLVRDLRGKSERNFKAYVSLFMRHLCEPGADNAETFADGVPREGLSRQHVL
TRIGVMSLIRKKVQEFEHINGYYSMPELIRKPVEPVKAAGAGESAAPSPAPSTATPITSA
APSPAPTQVTQAAPTPGGSEKDDKEEAKDEKSDAKDIKDEPMDTSDIKEEKPKSEEKETK
EVKEEAKEAERRMSVDEDSPKEDDKSEDKKSEDKEEKIKEELKEDADKKDDVKSEKAESE
GSDKPKDEKKDEDDDDVVLVKEEEDLKVERRKFMFNIADGGFTELHTLWLNEERAAAPGR
EYEIWHRRHDYWLLAGIVTHGYGRWQDIQNDLRFAIINEPFKMDVGKGNFLEIKNKFLAR
RFKLLEQALVIEEQLRRAAYLNLTQDPNHPAMSLNARFAEVECLAESHQHLSKESLAGNK
PANAVLHKVLNQLEELLSDMKSDVSRLPATLARIPPVAQRLQMSERSILSRLAATAANPS
PTAQMPQFPGGFQPGGSLPGFSSAAAAAANFSNFRPQYSVPGQPTPSSNKS
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagacgaagaagtagacggctctttcgcaggggacgaggacgtggaggaaggt
gaaggtcagaacgagaactccggcgagagtgatgaagcaccaccaaaggaggatgaagat
tattccccagaggatggcagaaagaagaaaaaaggaaagaaaaggaaagctcgtggagaa
gaaaagaaaggcagaaagaaaaagaagaagagaaggaatgagagtgaagaggaggatgac
tttagtatggagatggaggccgaaggagacagtgactatgccctcagcgccgtgtcatct
aagaagtctcgtaagggccgcggcagtaagcatgcgacgcctgtgaccccagccgcctcc
gactcgggctctggaatgccgactgttgaggaagtgtgcgcgtcgttcgggctgactgat
gtggacattcaatacagcgacgcggacctcgagaaccttacatcctacaagctattccag
cagcatgtgagaccgctactcgtcaaggaaaaccctaaggtgccagtatcgaagctgatg
atgctagttgccgccaagtggcgcctgttctgcgagtccaacccgcacctgagcagcggg
tcgcagaacatgggatcggaggagaacaccaacacctccacagcgtcagactacgcgcct
aaagcccggcctggacgccctcctaaagattctaagaacgacgaagcgggtgacgaacaa
gaggaagaagaggaggaggaagcgagcgacgagggcaccccggcgccccgcaagcgcggt
cgcaaggccaagcacgcggcgggcgccacgccgcgcggcaagcccggacgcaagcccaag
gtgcccacactcaagatcaagttcagcaagaggaagcgcacgagtagtgtgagtataaat
agtgaggaggaacaagaaggcagtgcgggcgcgaactctgactcggatgcagaattcgag
cagatgttagcggaggccgaagagcccaagccggccaccgccgccgcgccagaagacccc
gccgctgtcaaagaggaagatcccaatgcaccgccacagccgaagaagaaggcgaagacc
aagatcggcaacaagagcaagaagaagaagaagttgaagaccaccagcaagttccccgac
ggcgcggagggcgagcacgagcaccaggactactgcgaggtatgccaacaaggaggggag
atcatcctatgcgacacgtgtccgcgcgcataccacttggtgtgcctggagcccgagcta
gaagagaccccagaaggtcgctggtcgtgcccacactgcgaggccgaaggcaaccaggac
caggaagacgatgacgagcatcaggagttttgcaggatctgcaaagacggcggcgagctg
ctatgctgcgactcatgcccgtccgcctaccatcgcttctgtctcaacccgccgctggaa
gaggtgccggacggagagtggcggtgcccacggtgcagttgtccaccgttggagggcaag
gtggccaagatcctgacgtggcgctggaaggagcagccggccaagtcgaaggcgccgcgg
tcgcgcgagttcttcgtcaagtggcacgagcgctcctactggcattgcagttggatatcc
gagatacagttggacgtgttccacccgctgatgtaccgctactacatgcgcaagtcggat
cctgaggagccgcccaagttggaggagccgctcgacgaacgagataacagattcaaacgc
atacagaaggagaaacgccacgatcaggagtccgatgagaaagcgcttgaggagaaatat
taccggtatggtgtaaaaccagagtggctgatagtacaccgtgttatcaaccaccgcacg
tcgcgcgacggcaccacgtactacctggtgaagtggcgcgacctctcgtacgaccaggcc
acctgggagtcagaacacgcagacatcgctggcctcaaacaggccatggattactattca
gacatgcgcgcctacatcacctctgaaggcaagactaaaggaagcaaaggcaagaaacca
ggacgcaagagcaagaacagagataatcttgatgaggacgaaagcagcagtggaggacag
cccaagcccaggcgctacaacccgcctccagatcgtcccactacaaatctcaacaaaaaa
tacgaagatcagcctcccttcgtctacgagactggcatgcaacttcatccgtaccagctt
gaaggtctcaactggttgcgttattcgtggggacagggcatcgacaccatcctcgccgac
gagatgggtctcggcaagaccatccagacagtcacattcctctactccctcttcaaagag
ggccactgcaaaggaccattccttgtgtctgtacctttgtccacaatcattaactgggag
agagagttcgagttgtgggctccagatttgtactgcatcacctatgtaggcgacaaagat
tcccgagctgtaatcagagaaaatgagctgacttttgacgacggtgctaatagaggcggc
cgaccttccaagatcaagtcacaagtgaaattcaacgtccttcttacatcgtacgaatta
gtctcaattgacgctacttgtctcggatccattgactgggccgtgttagtcgtcgacgaa
gctcacagattgaagagtaaccaatccaagttctttaggttactggctggttatcatatc
aactacaagctccttttaacaggaacaccattgcaaaataatctcgaagagttgttccat
ttactgaacttcttgaataaggacaagtttaacgacctcgcggctttccaaaacgagttc
gcggacgtgtcgaaggaggaacaagtaaagaggctgcacgagatgctgggaccgcacatg
ctgcggcgtctcaaggccgatgtgctcaagaacatgcctactaaatccgagtttatcgtt
cgtgtggagttgtctcccatgcagaagaaatattacaaatatattttgacgagaaattac
gaggctctgaatcctaagagtggcgggcagactgtatctctacttaatgtgatgatggac
ttaaaaaagtgctgcaatcatccttatcttttcccagtggctgcggaagaagctccactc
ggccctcacggcaattacgatacacaagctctaatcaaggcatccggtaaactagtgttg
ttggccaaaatgttaaaactgttaaaagaacagggccacagagtgctgatcttctctcag
atgacaaaaatgttggatatcctggaagatttcttggagggtgaaggatacaagtacgaa
agaatcgacggtggtatcaccggtactattcgtcaagaagctatcgataggttcaacgcg
cccggcgcgcctcaattcgtatttctactgtctacaagagctggaggtctcggtatcaac
ttggcgacagcggatactgtaattatttatgactcagattggaatcctcacaacgatatt
caggcgttctcgcgtgcccatcgtatcggtcaggcaaacaaagtgatgatctatcgattc
gtcacacgtaacagtgttgaggagagagtaactcaagtcgccaagaggaaaatgatgttg
acgcatttggttgtacgtcccggtatgggcggcaagggtgccaatttcacgaagcaggaa
ttagacgatattttgagattcggtactgaagagctgttcaaagaagaggaagggaaagaa
gaagctattcattatgatgacaaggctgtcggagaattgctagatcgttctaaggaaggt
attgaacagaaggagtcttgggctaacgagtatctcagttcgttcaaagtcgccagttat
tccaccaaagaaggcgacggcgaagaagaagtggacacagaaattatcaaacaagaggca
gagaacacagatccggcatactggatcaaacttctccggcatcactacgaacaacaccaa
gaagatcaggcgagaacactcggtaaaggcaaacgtgtgcgcaaacaggtcaactacaac
gacggtagcgtcgcacagacagagaacagagaggacactacatggcaagacaatggctct
gactacaattctgacttctctcagggtagcgaagatgataaagaagatgacgacttcgat
gaaaagaatgacaacggggacctcctcagccgccgcagcaagagacgcctggagaggcga
gaggagcgcgacaggcccttgcctcccctgcttgccagggtcggcggaaatatggaagtc
ctcggctttaacgctagacaaaggaagtccttcctcaacgctatcatgcgatatggtatg
ccgccacaagacgcgttcaactcccagtggctagtgagagacctgcgaggaaaatccgaa
cgtaactttaaagcttacgtgtctctattcatgcgacatttatgcgagcccggtgcggat
aatgctgaaactttcgctgacggtgtaccaagggaaggtttatccagacaacacgtgttg
acacgaatcggtgttatgagtctaatcaggaagaaggtacaagaatttgaacacattaac
ggttactacagtatgccagaattgattcgtaaaccagtggaaccagtgaaggcagccggc
gcgggagagagcgccgcccctagccccgcgccctccaccgccacgcccatcacctccgca
gcgccttcgccggcgcccacacaggtgacacaggccgcacccacgcccggaggctcggaa
aaagacgataaagaggaagccaaggacgaaaagtctgacgcaaaagacattaaagacgag
ccgatggacacgagcgacattaaagaggagaagcctaaatctgaggagaaggaaactaag
gaagtgaaagaggaagcgaaggaggcggaacgacgcatgtcggtcgatgaggactcgcct
aaagaggacgacaaatcggaggataagaaatcggaagacaaagaagagaaaattaaggag
gagctgaaagaagacgccgataaaaaggacgacgtgaagagtgagaaggcagagtcggag
ggctctgataaaccgaaggatgaaaagaaggatgaggatgatgacgacgtcgttcttgtg
aaagaggaggaagatctgaaggtggagcgacgcaagtttatgttcaacatcgctgacggc
gggtttacggagctgcatactctgtggttgaacgaggagcgcgcggcggcgccgggccgc
gagtacgagatctggcaccgtcgccatgactactggctcctggccgggatagtcacgcac
ggctacggccgctggcaggatatccagaacgacctgcgattcgcgatcatcaacgagccc
ttcaaaatggacgtcggcaaaggaaacttcctcgagatcaagaataagttcttggcaagg
cgttttaagttgttggagcaagcgctagtgatcgaggagcaattacgtcgcgcggcctac
ctgaacctaacgcaggacccgaaccaccccgccatgtcgctcaatgcgcgcttcgccgag
gtggagtgtctcgccgagagccaccagcatctcagcaaggagtcgctcgccggcaacaag
ccagcaaacgctgtgctgcataaggtgctaaaccagctggaggagttgctctcagacatg
aagtcggacgtgtctcgcctgccggccacgttggcgcgcatcccgcccgtggcgcagcgt
ctgcagatgtccgagcgatccatactgtcgcgtctggcggccactgctgccaatccttcg
cccaccgctcaaatgccgcagttcccgggcgggttccagccaggtggctccctacccggt
ttctcgtcggccgccgccgccgccgccaacttctccaacttccgcccgcagtattccgtg
ccgggacaacccacaccctcctctaataaatcataa
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