Pectinophora gossypiella (pink bollworm): 126368103
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Entry
126368103 CDS
T09293
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
126368103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgw03021
]
126368103
03019 Messenger RNA biogenesis [BR:
pgw03019
]
126368103
Transcription machinery [BR:
pgw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
126368103
RNA polymerase I system
126368103
Messenger RNA biogenesis [BR:
pgw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
126368103
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
KOW4_SPT5
KOW
KOW6_SPT5
KOW7_SPT5
KOW5_SPT5
Spt5-NGN
KOW2_Spt5
KOWx_SPT5
Spt5_N
CTD
GPKOW_C
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
126368103
NCBI-ProteinID:
XP_049867969
LinkDB
All DBs
Position
1:complement(540637..545069)
Genome browser
AA seq
1095 aa
AA seq
DB search
MSDSEGSNYSGSGSDAGSVGSRRSRRSAASNRSARSRSVSRSRSRSRSGSRSPSRSPSRS
RSRSKSKSRSHSRSRSRSAGSDASRNRDDEAREASGDEDVEDEQEPEGEDLVDSEEYDED
EDEARHRKKRKKDSRYGGFIIDEAEVDDEVDEDDEWEEGAQEMGIVGNEVDEIGPTAREI
EGRRRGTNLWDSQKEEEIEEYLRNKYADESAALRHFGEGGEEMSDEITQQTLLPGIKDPN
LWMVKCRIGEEKATVLLLMRKFIAYQFSEEPFQIKSVVAPEGVKGYIYIEAYKQTHVKAI
INNVGTLRMGIWKQDMVPIKEMTDVLRVVKEQSGLKPKQWVRLKRGLYKDDIAQVDYVDL
AQNQVHLKLLPRIDYTRLRGALRTVQSESEAAKRKKKRRPAAKPFDPEAIRAIGGEVTSD
GDFLIFEGNRYSRKGFLYKNFTMSAILAEGVKPTLTELERFEEQPEGIDIELAAPAKDDP
TSLHSFSMGDNVEVCSGDLANLQARIIAIDGSMITVMPKHDALKDPLVFKPNELRKYFKQ
GDHVKVLAGRYEGDTGLIVRVEPHRVVLVSDLTMHELEVLPRDLQLCSDMATGVDSLGQF
QWGDMVQLDPQTVGVIVRLEKENFHVLGMQGKVIECKPQALQKRRENRFTMALDSEQNTI
QKKDIVKVIDGPHAGRNGEIKHLYRNFAFLQSRMYLDNGGIFVCKTRHLQLAGGNKNPST
NNNLSLGFMSPRIQSPMHPSGRGGATPRGGGRGAGRGGATRDRELIGNTIKITGGPYKGN
VGIVKDATGSTARVELHSTCQTISVDRSHIAGVGAPTKDGSTSFYSRTPGRTPTLGAQTP
TYRDTGIKTPMHGSQTPIYDIGNRTPHYGSATPSHDGSRTPAHGAWDPTAANTPARPNDF
EYNLDEGSPSPGYNPTTPYGQSGPFTPQTPGTMYGSDHTYSPYQPSPSPSGYPSGYLGTP
SPVGYSPRSPYNPSTPGSAADTMPAADWHTTEVEVRIRSSHEDDSLTGQIGVIRSISGGM
CAVYLPSEDRVVNVMGEVLEPVVPQSSDKVKVIAGEDREAVGQLISIENQEGVVKFGTDD
IKIMQLRHLCKMSTA
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattcagaaggcagtaattattcgggaagtggatcggatgcagggagcgttgga
tctcggaggtcaagacggagcgccgcgtctaaccgctcggcgcggtcgcggtcggtgtcg
cggtcgcgctcgaggtctcgctccgggagccgcagcccgtctcggagcccctccagatcg
cggtccaggtctaaatcaaagtcccgttcccattctcgctcaaggagtcgttcagcaggg
tcagatgccagccgaaacagagatgatgaggcaagggaggcttccggcgatgaagatgta
gaggatgaacaggagccagaaggagaggacctggtagactcggaggagtatgatgaggat
gaagatgaagcacgccacaggaagaagcgcaaaaaggacagccgctatggaggctttatt
attgacgaagctgaggtcgacgatgaagtggatgaagatgatgaatgggaagaaggtgca
caggaaatgggcatcgttggtaatgaggttgatgaaatcggacctacagcacgagaaatt
gaaggtagaagacgaggcactaacctttgggactcacaaaaggaagaagaaattgaagaa
taccttagaaacaagtatgctgatgagtctgctgccctcagacactttggagaaggtggt
gaggagatgtctgatgaaatcactcaacagactctccttcctggaatcaaagatcccaac
ttatggatggtgaagtgccgcataggtgaggagaaggctacagtccttcttctcatgaga
aagtttattgcttaccagttttctgaagagcccttccagataaagtctgtagtggcccct
gagggtgtcaagggatatatttacattgaagcatacaaacagactcacgttaaggccatc
atcaacaatgttggtacactcaggatgggtatctggaaacaagacatggtgcccattaag
gaaatgacagatgtcttgagagttgtcaaggaacagtcaggtttgaagccaaagcagtgg
gtgaggttgaagagaggcttgtacaaagatgacatagctcaggtggactatgtagattta
gcccaaaaccaagtccatttgaaattacttcctagaatagattatacaagactgagagga
gcgttgagaacagtacagagcgagagtgaagcagcgaagcggaagaagaaacgacgaccc
gccgctaagccatttgaccctgaggctatcagagctattggtggtgaagtcacttctgat
ggtgatttccttatatttgagggcaacagatattcaaggaaaggtttcttgtataaaaac
tttacaatgtcagctattctggcagaaggtgtgaaaccaactttgacagaattggaaaga
tttgaggagcaaccagaagggatcgacattgaattagctgccccagctaaagatgaccct
actagccttcactcattctcaatgggtgataatgtggaagtatgctctggagatttggcg
aatctccaagctagaatcattgccatagatgggtctatgataactgtcatgcccaaacat
gatgctttaaaagatcctttagtcttcaaacctaatgaattgaggaagtacttcaaacaa
ggtgatcatgtaaaggttttggctggtcgatacgaaggcgacactggattaatagtcaga
gttgaaccacacagagttgttctggtatctgacttgactatgcacgagttggaagtactg
cctagagaccttcagctctgttcagatatggccacgggtgtagactccttgggtcaattc
caatggggtgacatggttcaattagatccacaaaccgtcggtgtcatcgtaaggttagag
aaagagaatttccacgtcctcggtatgcaaggcaaagtgatagaatgtaaacctcaggcc
ctgcaaaaaagacgtgagaatcgcttcacaatggctctcgattctgaacagaatacgatt
cagaagaaagatatagtaaaagtcatagacggcccacacgccggacgcaacggtgaaatc
aaacacttgtacagaaacttcgcatttttacagtcgagaatgtatctagataacggtggc
atatttgtctgcaagacgcgtcatttgcaactagccggtggaaataaaaatccttcgaca
aataacaacctgtcgctcggttttatgtccccgcgcatccaatctccgatgcacccgtcg
gggcgcggcggcgccaccccgcgcggtggaggacgcggcgccggtcgcggcggcgccacg
cgcgaccgcgagctcatcgggaacaccatcaagatcactggtggaccctacaagggcaac
gtcggcatcgtcaaggacgccaccggaagcaccgctcgcgtcgaactgcactcgacgtgt
cagactatctccgtggatcgcagccatatcgccggagtcggagccccgacgaaggacgga
tcgacctccttctacagccgtactcccggtcgaacgccgactctcggggcccagacgccc
acgtacagggacacgggtatcaagactccgatgcacggatctcagactccgatctacgac
atcggcaaccgcaccccccactacggctcggccacgccgtcccacgacggcagccgcacg
ccggcgcacggggcctgggaccccaccgccgccaacacgccggcgcgaccgaacgacttc
gaatacaacctcgacgaaggctctcccagccccggatacaatcctaccactccatatggc
caaagtggaccgttcactccgcaaactcccggtactatgtacggttcggatcacacttac
agtccgtatcaacccagcccgagtccttccggatatccctctggatacttgggtacgccc
agtccggtcggttactctcctcggtcgccttataatccttctactccaggcagcgcggcc
gacacgatgcccgctgccgattggcacacgaccgaagtcgaggtcaggatacgatcctcg
cacgaagacgactccttgaccgggcagattggggttatcaggagtatatctgggggtatg
tgcgccgtgtacctaccgtcggaagatagagtcgtaaacgtgatgggcgaggtgctggag
cctgtggtgccgcaaagtagcgacaaggtgaaggtgatcgccggcgaagacagggaagcc
gtgggccagttgatatccattgagaaccaagaaggggtcgttaagttcggcaccgacgac
attaagatcatgcagctccgacatctctgcaagatgagtactgcttag
DBGET
integrated database retrieval system
