Pectinophora gossypiella (pink bollworm): 126368564
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Entry
126368564 CDS
T09293
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126368564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgw03041
]
126368564
Spliceosome [BR:
pgw03041
]
Complex A
U1 snRNP components
U1 related factors
126368564
Complex B
126368564
SSDB
Ortholog
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GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
RhoGAP-FF1
CEP164_N
WW_2
Motif
Other DBs
NCBI-GeneID:
126368564
NCBI-ProteinID:
XP_049868560
LinkDB
All DBs
Position
7:5679296..5688583
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AA seq
826 aa
AA seq
DB search
MEPPTTGTSSPGLLTTGPLLPPPMLGGLAPPIPTPAVAMPPVPGMPPNMTGLPPPMGFPP
MLPFSMPPPGFPSFKPELTAPAPDVAPLANQSSPWSEHKSPDGRIYYYNSVTKQSLWEKP
DDLKTPAEKLLSSCVWKEYTTDAGRVYYHNIETKESSWVIPPELQDIKDKIAAEEAAQAA
LNADLPPGEVPLPGSPAVSNGTAPGTGSSALDEAMAKTLAAIDTNLTNSIPIPEEIKPEE
IVAPPQSSSSDAAEQPELQYKDKKEAVEAFKELLRDRNVPSNATWEQCVKIISKDARYAA
FKKLNEKKQAFNAYKTQKLKDEREEQRLKTKKNRENLEEFLLNCDRVTSLTKYYKCEEMF
SNLELWRCVPESDRRDIFEDCIFTITKREKEEAKALKKRNMKMLAQVLENMSEITYSSTW
SEAQVLLLENSAFKNDVSLLGMDKEDALIVFEQHIRNLEAEYLQEKEQIKKRNKRQQRKN
RDNFLALLDSLHEEGKLTSMSLWVELYPVISADMRFSAMLGQSGSTPLDLFKFYVENLKA
RFHDEKKVIKEILKEKEFEVKPETSFEEFATVVCEDSKSASLDAGNVKLTYNSLLEKAEA
KNKEKLKEESKAQKKIESSFKWALTEANIDHQLPWEEVKEKLDLNAPEFTAVPDEEERIR
IYKDFQHEQEESCMHYHHPKPRKAKRSKKKKRSHSASVSKSRSRSGSPVAARSPSPMPSH
GSWSSEEGRKPKKSKKKHRKHSPTLKSPTPEEGGISDEEPTRHKSKKSKRSAPVSPEGEH
EHAHKPKKKKEKKEKKDRSSTSGAWSDAELESRRAALLAQLHEQED
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggagccacctactacggggacaagttctccggggctcctcacgacggggccactgttg
ccgccaccaatgctcggtggactggcgccgcccattcctacacctgcagttgccatgccg
cctgttcctgggatgccacccaatatgacagggttaccaccaccaatgggctttcctcct
atgttaccattttctatgccgcccccgggttttccgtcgtttaaaccggagttgactgca
cctgccccggatgtggcgcctctagccaatcaaagcagtccatggtccgagcacaagtca
cctgatggacgcatatattactataattctgttactaaacaaagtctttgggaaaaacct
gatgatctgaaaacacctgcagagaaactgttatcttcatgtgtatggaaagagtacaca
acagatgctgggagggtatattatcacaatattgaaacaaaggagtcaagctgggttata
cctccagaactgcaggatattaaggataagatagctgctgaggaggctgcacaagctgcc
ttaaatgcagatttgccgcctggggaagtgcctttgcccggctccccggctgtaagcaat
ggcacagcccctggcactggaagctctgcattggacgaggcaatggctaagacccttgct
gccattgatacaaacctaacaaattctataccaatacctgaagaaatcaaaccagaagaa
atagtagctccaccacagtcatcatcatcagatgccgcagaacaacctgaactgcagtac
aaggataagaaggaagctgttgaggcattcaaggagttgctccgagatagaaatgtacct
tcaaatgctacctgggagcagtgtgttaagattatatctaaagatgcacggtatgctgcc
tttaaaaagctcaatgagaaaaagcaagcattcaatgcatacaaaacacagaaattgaaa
gatgaaagggaagaacagaggttgaaaacaaagaagaatcgtgaaaatcttgaagagttc
ttattgaattgcgatcgagttacatcgctcacgaaatattacaagtgcgaggaaatgttc
agcaacttagagttgtggcggtgtgttcccgagtcggaccgcagggatatattcgaagac
tgtatatttacaatcacgaaacgcgagaaagaagaagccaaggcgcttaagaaacgaaat
atgaagatgttggctcaagttttggaaaacatgagtgagatcacatacagtagcacatgg
agtgaagctcaagtgttgttattagaaaactctgcatttaaaaatgacgtcagtctgctg
ggcatggacaaagaagatgcacttattgtttttgaacaacacatcagaaatttggaagcg
gaatatctacaagagaaagaacaaatcaagaaacgaaataagcgtcaacaacggaaaaac
agggacaactttttggctttgttagacagtcttcacgaggagggcaagttgacgtccatg
tcattgtgggtggaattgtatcccgtaatttcggcagatatgcgattttcagctatgttg
ggtcaaagtggatctacacccttagatctgttcaaattctacgtagagaatctaaaggcg
cgcttccacgatgagaagaaagtaattaaagagattctcaaagagaaagagtttgaagtt
aaacctgagaccagctttgaggaatttgctacagttgtatgcgaggacagcaagtctgct
tcattagatgctggcaatgtcaagcttacatacaattccttgctcgaaaaggctgaagcg
aagaataaagagaaattgaaggaagaatccaaggctcagaagaagatcgagagctcgttt
aagtgggcactgacagaagcaaatatcgatcaccaactgccttgggaggaggtgaaggag
aaacttgacctgaacgcgcccgagttcaccgccgtgcctgacgaagaagaacgtatcagg
atatataaggacttccaacatgaacaggaggagagttgcatgcactatcaccaccccaag
ccgcggaaggccaagcgctccaaaaagaagaaacgatcgcattccgcttctgtctctaaa
tcacgatcaagatccggatcgcccgtggcggcgcgttccccgtcgccaatgcccagccac
ggttcgtggagctctgaagagggccgcaaaccaaagaaatctaagaagaagcatcgcaaa
cattcccctacgctgaaatctccgactcctgaggagggtggaatatcagatgaagagccg
acgcgacacaaaagcaagaaatcgaagcgtagcgctcccgttagccccgagggtgaacat
gagcatgcacacaagcccaagaagaagaaggaaaagaaagagaagaaggacagatcaagc
acgtcgggcgcgtggagcgacgcggagctggagtcgcggcgcgcggcgctgctggcgcag
ctgcacgagcaggaggactga
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