Pectinophora gossypiella (pink bollworm): 126368570
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Entry
126368570 CDS
T09293
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126368570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgw03019
]
126368570
03036 Chromosome and associated proteins [BR:
pgw03036
]
126368570
Enzymes [BR:
pgw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126368570
Messenger RNA biogenesis [BR:
pgw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
126368570
mRNA degradation factors
5'-3' decay
Decapping complex
126368570
Chromosome and associated proteins [BR:
pgw03036
]
Eukaryotic type
Gene silencing
piRNA pathway
126368570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
126368570
NCBI-ProteinID:
XP_049868573
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All DBs
Position
7:5772795..5777906
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AA seq
441 aa
AA seq
DB search
MMTENRISSSNHVGNSMNNQKGDVDKTIDDIGWKSKLKIPAKDRRIKTSDVTDTRGNEFE
EFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVD
PKKDCIQALVVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVII
ATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLFSATF
PLSVKQFMEKHLREPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIF
CNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRAGLCRNLVCSDLFTRGIDV
QAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYEDRFALHRIEQELGTEIKPI
PKVIDPALYVARPDEDDGADK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgaaaataggattagttcgagtaatcacgtcggaaacagtatgaacaatcag
aaaggagatgtcgataaaactatcgacgacatcggttggaaatctaaattaaaaataccc
gcaaaagacagaagaataaaaactagtgatgtgacagatactagaggtaatgagtttgaa
gagttttgcctgaaacgagagctgttgatgggcatttttgaaaaagggtgggaaaaacct
tcccccattcaagaggcttcaattcccatcgcacttagtggtaaagatgtgcttgcccga
gctaaaaatggaactggtaaaactggagcttattgtattccagtcttggaacaggttgac
cccaaaaaagattgtattcaagctttagttgtggtaccaactagggagttagcactccag
acatcacaaatttgcattgaactggcgaagcacactgacatacgcgtcatggtcaccaca
ggaggaactaatcttcgtgatgacataatgcgcatttatcaaaatgttcaagtgataatt
gctacgccagggcgtatgattgatctcatggataagcaagtagctaaaatggaccagtgc
aggatgctggttctcgatgaggcagataaactcctttcccaagatttcaaaggaatgctg
gatatggttatttcacgattacccaaagaacgtcaaatactgctgttttctgcaaccttc
ccactgagtgtgaaacaattcatggaaaaacacttgagggagccatatgagattaacctc
atggaagagttgacactgaaaggagtgacacaatactatgcatttgttcaagaaagacaa
aaagttcattgtttaaatacacttttttcaaagttgcaaataaaccagtctataatattt
tgcaattcaactcagcgtgtggagctccttgccaagaagataacagaactgggctactgc
tgctactacattcacgcgcgtatggcgcaggcgcatcgtaatcgcgtgttccatgatttt
cgcgcaggcctctgccgcaacttggtgtgctccgatctcttcaccagaggtatcgacgta
caggcggtcaacgtggttatcaattttgatttcccccgcatggcggagacatatcttcac
cgtatcggacgttcgggccgcttcggtcacttgggtatcgctatcaacctaatcacgtac
gaggaccggttcgctcttcaccgcatcgagcaggagctgggcacggagatcaagccgatc
ccgaaggtgatcgacccggccctgtacgtggcgcgcccggacgaggatgacggtgccgac
aagtaa
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