Pectinophora gossypiella (pink bollworm): 126368774
Help
Entry
126368774 CDS
T09293
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgw03009
]
126368774
Ribosome biogenesis [BR:
pgw03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
126368774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
HEAT_EF3_GNC1
RSLD_CPSF6
DUF2019
Motif
Other DBs
NCBI-GeneID:
126368774
NCBI-ProteinID:
XP_049868874
LinkDB
All DBs
Position
8:complement(12638496..12654954)
Genome browser
AA seq
2785 aa
AA seq
DB search
MKSKPVKHKTTNTFRFIPFAERINSIDVRHAALYHIEHAYAAQPGENETHFSLAVQKWYA
LNLTDNFKKFRKEVFGVTTVPQLVHKKDHVLEVLEKYLNLEDSLCLQPLLEILVSLAKDL
REDFYPHFPRFLDILIKLLNTKDAERLEWTLVCLAFLFKILKPYLKKDVATVLKRIIPLL
SDAHPQYINNFAAESFAFVARDIRDKKKFIDLMLNYLQSNDDAITGCGHLIFEILRGVTG
KFHSCIETFLPLLLEHLKDSKNHQEILFKVLTQTIEDSLQIISHKEYTVFWNCIIKFSEE
ILKEDDETSKGLEYILRLAGQVIEHQNGKYLTNPPQFVLLLVKVICEQSSESVLEVCAQI
GALLLLSPNISLSQEHAGIIVKVILPLPFPNILIKFVQNVINYSQFDMHILPPFINYVIQ
SNFDDEAMSTLTKICLTKSPLSKNGIKLFEWVKYPVDFGKKLPLFMDYFNKVVNEPIENI
VEDPIKLMNVLFCLPHMEKIDVDLCVKSLNQLITKLLKVLENYNLENQLYENKFHCDTTP
LSKCARQVLFILSNAMESAIHISSCKKLKEICDIDILLPVLLPCAADPNYLSALHLVDLY
LTAYEHENGLTYPFLSLVDSFLKNNISSPFHIVRLLTTHIYKLFENVEELNKTVQVGGVE
EKFSVFSRCYTVESISPSIQEYRAQLNMLQKMAFNTTQYALAKDTEFHLFALNYMLGVLY
VNFKLLWEPVTEFIAGYGNALTVDEFWPVFHKALESSFVNAKKNLKQFQFDDDIDTNNDL
IKDLYSEYNSITERPDLYNYRNLILKIMTNCIQVCEARNRDVVVLFLNFIDEEYRRNDIT
NALKIDVQLRDKSNTEMDVDEDKPEEENEIVEVLADDIDEEKETVSGKIVFKTLINIMQV
LAQFKNPRALHRESIFWELFMEFLKHKNPGLQKYALDCVLNYRNKSVVAYKNNLNNLVDE
KKFKDEMTLFKITEDAQSIQPEDREHVIPIILRILYGKMTSKLAADKKGGGQTRRALVMR
YLAGCNEGELKIFIEMAFSHFKQYMAVDVKDIYENIRSHLDLKSVTSPGKLHSILNLFEV
VREYFGGYMKEELLSHLFKIFYAVCSTIATVLAQGEKVHVGYVKVMKNLRVIALGTLRKL
FDQFDKYPWTTEELRVVFETLLWPLLPKLHIEGIHTPTALLKLLNTWCQNPRYYVLLVTC
SEKDHTLTPLPAIFKLLLAPKTSPGVVNVILDMIEKLLTLSEDEEEKELLAIESFNTLDV
ANITEANNINFGSKILIPHIPSILEVMKRRIANSAKSNTVNKRDLLILSRVTELVASPEI
CDELLNLLLPILVKKVCMNMAEENMEHAVNTIINLLGHSTNPQVYIKNIAILFNKVTPVD
VRKLLIKVLVSISENAKTNKDVLTRMSNIVTEMNAFNKRWIEQPDFDRRLEAYKQIYSLS
ENNEIDVDLAILIVNNCFYSIRTEKDIGLRDSAGLCLKRILPKLLKKYWSTTDGQFLVRD
TVLSLLSTGIRDVKNEIHRNESIALLGELARECPDADVVLSDLATLTNKEDTEVDFFENM
CHLQLHRRVRALQKFCKVSRKVVKCPSPRTLTNFILPLASTYLCDEKYTDKNSLIDACVD
VVSTCCRLLPWYHYEVILKLYLNKMRHSSDHQKQLTRIIIGILDAFHFDFSKAKNIELPK
ALTTNIDVKVGKFGKKSANIDKNDSKKEMIKDENEKTDENNDKSEEGTEINEDETQKDED
LEAELDAVVEEDEEAIEEKVAKEVSNVPAYERITSVSPSVAKRIVKSLSVGLLPQLNRAI
GKMTDHEESHKVNRRHTSFERQEEDMLRVPIALAVVKLLQRLPGELLRHQLSGIIIKLCS
FLKSPLKRVRIMARDIVKKIMLTVGTQYMGILLEHLTLLLTRGFQVHVLVATIHTVLDAL
KSDFKPGELNDNLHCILDVCTNDLFGALSEEKEVEKLHYKTPEAKPSKKSYVTLMIVSQN
ITEKCLINLLLPFKEILQKHHSKKIVVKVQEALMHITSGLVTNKFIDIESLFVFLHGIAS
ESIPELVLNAPRRELTEAQREKIMRAKPDCFIIPETPKRNKESQAKNVKTSGKANAHVLV
EFSLNILYVILKREKVPRMDCRAFVDPLVPLMVDALKSGHIKVTTGAMKCISTLWTIRVS
TPTLVEMTPDIVKTIFSILHKYATFEISKQNDNYHLVRNAFKAVTVLVRNVKYYTLDEDQ
LKTLLLYAEEDCQNDERQANSFSLLKAILEAKLVSNELHEVMEKVSKICILSESARSRDE
ARGIFVNYLTNYSPGKRMDKYIQFFVSQLNYELQHGRESSLKFLGMIISKLIVPQLSKQS
DYLLLGLGASMVNDSAPECRAAAAGCIEAMLRRLPAQDRNKLFQIALTFLQDTQPVHFEL
AAQLSIRFVNVEAEEFKNRLDSILSLISGKILLLSNDITEGRFVKVKLDQEDDKTDEEKQ
KEKDHSLIQILNLIDKITVHCASSLKNKKYDSDFDEIAQHCQALLAYPHAWVRLRAAKII
GAILSAVNVEELDTIVKLKKETDRGFIYYDTENAFKSLVLDLCAQYTTSVSKEMAEQVTT
VLFTILSLVNSISSFKLPSKVEDYPEEKAKVNIRWILYKLRKAVNVEVARAPNSMNIRTS
IFTMWQHVISSLSDEDLHKIVDVLLPPIVRELSTGDAMAPASAVRQLANRLGKKLRRKIG
DIEYGKMVADAQTRLNIRRAERKKVLLQEKVNNPEKAAKRKLQVKEKKKQAKKVKLEMLH
GKRPRAKKRKAEDIDIEDQLLKDDE
NT seq
8358 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtaaacctgtaaaacataagactacgaatacttttcggtttattcctttcgcc
gaacgtataaattctattgatgttcgccatgcagcattatatcatattgagcatgcatat
gcagcccagccaggagagaatgagacacatttctctctggctgtacagaagtggtatgca
ctcaatttgacagataactttaaaaagttcagaaaggaagtgtttggggtcactactgtg
ccgcagttggtgcataagaaagaccatgtattggaggtattggagaaatatttgaattta
gaagattcattgtgtctgcaacctttattggaaattctagtttccttagcaaaagacttg
cgagaagatttctacccacacttcccaaggttcttagacattcttataaaactactgaac
accaaagatgcagagagactagaatggacattggtctgccttgctttcctatttaaaatc
ttaaaaccatatttaaagaaggatgtagccacggtactcaagaggattatacctttgttg
agtgatgctcatccacagtatattaacaactttgcagccgagagttttgcatttgtagca
agagatataagagacaaaaagaagtttattgatctcatgttaaactatctacagagcaat
gatgatgctataacaggatgcggtcatctcatcttcgaaatattaaggggagtcactgga
aagttccacagctgcatagaaacattcttaccattgcttcttgaacacttgaaagacagc
aagaatcaccaggagatattattcaaagtccttacacaaactattgaagacagtttacaa
attatatctcataaagagtatacagtattttggaactgtatcataaaattctctgaagag
atattgaaagaagatgacgaaacaagtaaagggttagaatacattctaagacttgctggc
caagttattgaacatcaaaatgggaaatatttgacaaatccaccacagtttgtcctttta
cttgtaaaagtaatatgtgaacagtcttctgaaagcgtgcttgaagtttgcgctcaaatt
ggcgctctattattattatcaccaaacatatctttgtctcaagaacatgctgggatcata
gttaaagtcatattacccttaccatttccaaatattctgattaaatttgtccaaaatgtt
atcaactattcgcaatttgacatgcatattctgccgccgttcataaactacgtcattcag
tcaaattttgacgacgaagctatgagtactttgaccaaaatttgtctaacaaagtctcct
ctttcaaagaacggtataaagcttttcgaatgggtaaaatatcctgtagattttggaaaa
aagttgccactatttatggattattttaacaaagtggttaacgaaccaatagagaatatt
gtagaggatcctattaaattaatgaatgtgttattttgtttgccgcatatggagaaaatt
gacgtagatctttgtgtaaaatcactgaatcaattgataacgaaacttctaaaagttctg
gaaaattataatcttgaaaatcaactgtatgagaataagttccattgtgacacgacccct
ttatcgaaatgtgctagacaggtgttgttcatactatcaaatgctatggagagtgctata
catatttcaagttgtaagaaattgaaagaaatatgtgacattgatatactgttgccagta
ttgctgccatgtgcagcagatcctaactatctgtctgcactgcatctcgttgatttgtat
ctaactgcatatgaacatgaaaatggattgacgtacccattcttgtcgttagtcgactca
tttttgaagaacaatatttcgtcaccgtttcatattgtccgcttactaacaacacacatt
tacaagctatttgaaaatgtagaagagctgaataagacagttcaagttggtggcgttgaa
gaaaagttctcagtattcagtcgctgctacacagtggagtctatatcaccatctatccaa
gagtacagagctcagctaaatatgctacagaaaatggccttcaatacaacccagtatgct
ctggctaaagacacagaattccatctatttgcattaaattacatgctgggagttttatat
gtcaacttcaagttactttgggagccggtgacagaatttatcgcaggatatggcaacgct
ctgacggttgacgaattttggcccgtattccacaaggctttagaatcctcatttgttaat
gccaagaaaaacttgaagcaatttcaatttgatgatgacattgatactaacaacgacctg
ataaaagacttatactcggaatacaatagcattactgaaagaccagatttgtataactac
agaaacctcattctaaagattatgacgaattgcattcaagtgtgtgaagctcggaatcga
gatgtagttgtgttgttcttgaactttatagatgaagaatatagaagaaatgatattacc
aatgctcttaaaattgacgtacaacttcgtgacaagtcaaatactgaaatggatgttgac
gaagacaaacctgaggaagaaaatgaaattgttgaagtattagcagatgatattgatgaa
gaaaaagaaactgtgtctgggaaaattgtgtttaaaactttaataaacataatgcaggtg
ttagcgcagtttaaaaatccaagggctcttcacagggagtcaatattctgggagcttttc
atggaatttttgaagcacaaaaaccctggtcttcaaaaatatgcattagactgtgtctta
aactataggaacaaaagtgttgttgcctacaaaaataatttgaacaacttagtagatgaa
aaaaagtttaaagacgaaatgacgttatttaaaattacagaagacgctcaaagcattcag
cctgaagacagagaacatgtcattccgataattttgaggattttatatggaaaaatgaca
tcaaagctagcagcagataagaaaggaggaggccaaacaagaagagcactagtcatgagg
tacttagcaggttgcaatgaaggtgaacttaaaatattcattgaaatggccttttctcat
tttaaacaatatatggctgtggatgtaaaagatatttacgaaaatatcaggtctcatcta
gatctgaagtcagttaccagtccaggaaaactgcacagtattttaaatttgtttgaagtt
gtcagagaatattttggagggtacatgaaagaagaattgctgtcccatttgtttaagatc
ttttacgcagtttgttctacaattgcaacagtacttgctcaaggtgaaaaagttcacgtg
ggatacgttaaagtgatgaaaaatctcagagtcattgcacttggaacattaaggaaacta
tttgatcaatttgacaaatacccgtggaccacggaagaattgcgtgttgtatttgagacg
ttactctggcctttattaccaaaactacacatagaaggcatccatactccaactgcatta
ttaaagttacttaacacttggtgtcaaaatcctcgttactatgtgttacttgtcacgtgt
tctgaaaaggatcacactttgactccactgccagcaatattcaagcttctattggcgccg
aagacaagtcctggtgtagtaaacgtaattctagacatgatagaaaagctgttaacattg
tcagaagacgaagaagaaaaagaattacttgcaatagaatctttcaatacattagatgtt
gctaacattactgaagcaaataacataaactttggaagtaaaatcctcattcctcacatc
cctagtatcttagaagtgatgaagcgacgtatagcgaactcggctaaatcaaacacagtg
aacaaacgagatcttttgattctctctcgagtgacggaattagttgcatcgcctgaaata
tgtgatgagctcttgaatctgctattacccatcctagtaaagaaagtctgtatgaatatg
gcagaggaaaacatggagcatgctgttaatacaatcatcaatcttttagggcacagcact
aacccacaagtttatatcaaaaacattgcaatacttttcaataaagttactccagtcgat
gttagaaagctcctgataaaagtattggtttctatttctgagaacgcaaagacgaataaa
gatgtattgacaagaatgtcgaatatagtgactgaaatgaatgcattcaacaagagatgg
attgaacaacctgacttcgacagaagattagaagcgtacaagcaaatatacagcctatct
gaaaataacgaaattgatgtagaccttgctattttaatagtgaataattgtttttattcc
attcgcactgaaaaggacataggtctacgagatagcgctggtttgtgtttaaagagaata
cttccaaagcttctcaagaaatattggtcgacaactgatggccaatttctcgttagagat
accgttttatctcttttatcaacaggtataagagacgtaaaaaacgagattcatagaaac
gaaagtatcgctttacttggtgaattagcgagagaatgccctgatgctgacgttgtcttg
tcagatttagctaccttgacaaataaggaagacacagaagtagatttctttgaaaacatg
tgtcatctccaactgcacaggcgtgttagagctttgcagaaattctgtaaagtttcaaga
aaggtggtcaagtgtccctcgccaagaactcttacgaatttcatactgcctttagcatca
acatatctttgtgatgaaaaatatactgataagaattccttgattgatgcgtgtgttgat
gtcgtgtctacatgctgcagacttctaccttggtatcactatgaagtaatcttaaaactc
tacttgaataaaatgcgccattcttccgatcatcagaaacaattgacgcgtataataatt
ggtatcttagacgcgttccattttgatttctctaaagcaaagaatattgaactgcctaaa
gctctgaccactaatatagatgtaaaagttggcaaatttggtaagaaatcagcgaatatc
gacaaaaatgatagtaaaaaagaaatgatcaaagatgaaaatgagaaaacagatgaaaat
aatgacaaatcggaagaaggtacagaaataaatgaagatgaaactcagaaggatgaagat
ttagaagcagaattagacgcagttgttgaagaagacgaagaagcgattgaagaaaaagtg
gctaaagaagtttccaatgtaccagcttatgagagaattacaagtgtatcaccgtctgtt
gctaagagaatagtaaaatctttgtctgttggactacttccgcagctaaatagagcaata
ggcaagatgacggaccacgaggaatcccacaaggtgaaccgtcgtcacacaagcttcgag
cgacaggaggaagatatgctacgagtgcccatagctctggctgttgtcaagttacttcag
agactccctggggagttgctgaggcaccagctatcaggaataataataaaactctgctct
ttcctaaaatcgcccctgaaacgagtcagaataatggcgagagatatagtcaagaaaata
atgttgacggttgggacacaatacatgggaatcttgctagaacacctaactttactactg
actagaggctttcaagtccacgtattagttgccaccatccataccgtccttgacgctttg
aaatctgacttcaaacctggagaattgaatgataaccttcattgtatactcgacgtgtgc
acaaatgaccttttcggtgcgctatctgaagagaaagaggttgaaaagttacattataaa
acacccgaagctaagcctagtaaaaagagctacgtaactctcatgatagtctcacagaat
ataacggaaaaatgtctgataaacctccttttaccattcaaagaaatactgcaaaaacat
cattcgaagaaaatcgttgtgaaagtgcaggaagccttaatgcacataacaagtgggtta
gtaactaataaattcatcgatatagagtctttgtttgtttttcttcatggtatagcatct
gaaagtataccagagctagtattaaacgcgcctagacgggaactgactgaggcacaaaga
gaaaaaataatgcgtgcaaaaccagactgtttcatcatccctgaaacaccgaaacggaac
aaagaatctcaagctaagaacgttaaaacttcaggcaaagcaaatgctcacgttttagtg
gaattcagtttgaatattttatacgtaattctgaaaagggagaaagtaccaagaatggat
tgcagagcatttgtggatcccttggttcccttgatggtagatgcgctcaaaagcggtcat
attaaagtgacaacgggtgctatgaagtgtatatcaaccttgtggactatcagagtaagc
acacctactcttgtagaaatgacaccggatatagtgaagacgatattctcgatactgcac
aagtatgctacttttgaaattagcaagcagaatgacaattatcacttggttaggaatgct
ttcaaggctgtgacagtgctagtccgtaacgtaaaatactacactctagacgaagatcaa
cttaaaaccctactgctttacgccgaagaagattgccagaatgatgagagacaagcgaac
tcgttctccctgttgaaagctattttagaagcgaagctagtttcaaacgaattgcacgaa
gttatggagaaagtgtctaagatttgtatattgagtgaatcggcgaggtctagagatgaa
gcgcgaggtatcttcgtaaactatttgacaaactactctccaggcaaaagaatggacaag
tacatacaattcttcgtgtctcaattgaactacgaattgcagcacgggagggagtcgtct
ttgaaattcttaggaatgatcattagtaaattgattgtgcctcaactatccaaacaaagc
gactacctcctgctaggtcttggcgcgagtatggtgaatgacagcgcgccagagtgccgc
gccgccgccgccggctgcatagaggctatgttgcgcagactacccgcgcaggacaggaac
aaactgttccaaatagcgcttactttcttgcaggacacgcagccggtccacttcgagcta
gcagctcaactgagcattcgcttcgtcaacgtcgaagctgaagaattcaagaaccgtctc
gattcaatcctttctctgattagcggcaaaatacttctcttaagcaacgacattactgaa
ggcaggtttgtaaaggtcaaactcgaccaagaagatgacaagactgatgaggaaaaacag
aaggaaaaggatcatagtctgattcagattttgaaccttattgacaagattacggtgcac
tgcgcttctagcttgaagaataagaagtatgatagtgattttgatgaaatagcccaacat
tgtcaagcgttattggcttatcctcatgcttgggtgaggttaagagcggctaaaatcata
ggggctatactatcagctgttaacgttgaagaattggatacaatagtcaaactaaagaag
gagacagatagaggattcatctattacgatacagagaatgcgttcaaaagtctggtgcta
gatctctgtgcgcagtatactacgagtgtatctaaagagatggcagagcaagtaacaaca
gtcctattcacaatcctgtccctcgtcaactcgatatctagtttcaaactgccgtccaag
gtggaggactaccctgaagagaaggcgaaggttaacataaggtggatcttgtacaaattg
aggaaggctgtcaatgttgaggtcgccagggcacctaattccatgaacattagaacatca
atattcacaatgtggcaacacgtaatcagctctttatccgacgaagacttacataaaata
gtcgacgtgttgctaccgccgatagttcgagaactctccactggcgacgcgatggcgcct
gcgtctgctgtcaggcaactcgctaacagactcggcaagaaactcaggaggaagattggg
gacatagagtatgggaagatggtcgctgacgcgcagactcgcctcaatattaggagagct
gagaggaagaaggttctcttgcaagaaaaagtcaacaatcccgagaaggctgctaaaagg
aaactccaagtgaaggagaagaaaaaacaggcgaagaaagtaaaactagaaatgctccac
ggaaagcgaccgcgcgctaagaaacggaaagctgaagacatagatatcgaagatcagttg
ttgaaagatgatgaatga
DBGET
integrated database retrieval system
