Pectinophora gossypiella (pink bollworm): 126369180
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Entry
126369180 CDS
T09293
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03440
Homologous recombination
pgw03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126369180
03460 Fanconi anemia pathway
126369180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgw03032
]
126369180
03400 DNA repair and recombination proteins [BR:
pgw03400
]
126369180
Enzymes [BR:
pgw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
126369180
DNA replication proteins [BR:
pgw03032
]
Eukaryotic type
DNA Topoisomerases
126369180
DNA repair and recombination proteins [BR:
pgw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
126369180
FA (Fanconi anemia) pathway
126369180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
zf-C2H2_10
zf-LITAF-like
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
126369180
NCBI-ProteinID:
XP_049869431
LinkDB
All DBs
Position
8:11472483..11490033
Genome browser
AA seq
1060 aa
AA seq
DB search
MRYLFCNGYNLSRRINLRLCTNKLPVFVITRFKSETMKYLNVAEKNDAAKNIAAHLSRGT
SRRREGLSQYNKIYEFEAEVMGQKAQMVMTSVSGHLLALEFVGSYKHWQACNPLVLFDAP
VFKYCPENYEKIKKTLEREVRSCQGLIIWTDCDREGENIGFEIIQVCTAIKSNIPVYRAK
FSEITAVSVRRALANLEQPNKNISDAVDVRQELDLRIGAAFTRFQTLRLQRVFPTKLAES
LVSYGSCQFPTLGFVVERYRAVEAFVAEPFWKIKVNHTMNGLSVDFAWDRVRLFDRDACQ
VLHDICMENPQAKVVEVKTKPKSKWRPLPLDTVELEKLGSRKLKINAKETMRLAEKLYTQ
GLISYPRTETNEFPKEMNLGQLVGLQTGDPNWGAFAQGILDSGGPTPRQGNKSDKAHPPI
HPTKHTNSLSGNEQRLYEFIVRSFLACCSKDAQGQETTASIDVAGERFSASGLMITARNY
LDVYPYDKWSSKEIHVYQNGQTFNPTSIDMLDGTTSPPNLLTEADLIALMEKHGIGTDAT
HAEHIETIKSRSYVALADAIHFVPGLLGMGLVEGYDAMGLNISKPHLRAQLEADLKAISE
GRKQPQVVLAEQIAKYKEVYLTVTAEANKIDAALAERFSERPNEYTPSVENMPDMPSALK
CPKCGSDMVVRPKKNSDEFFISCISFPKCKNAVWFPTIVKTLQVLPDSCPSCGPNYKKIK
FEWRNNSISHLYPPPYVGCIGGCDTTFLELLKINLSSVRNLGNRTQQTGTNNTITGLSTR
DTTSTMVPAPSRTNQTRPNNTQTRPANQPRQTVNSQPRQFLPPPTVNRGQNAGPRMPAPR
GSGDPDDNNVICGCNKAAILLTVRKQNANCGKKFYKCPDGGCDFFLWAPESLETGTNNFD
TPPASNSWNANNASQNNSGWGNDSGNSRGNAQNSTRGWGITPSSSRDSYPSNEDDVMCNC
GVPCKKVTVHKEGPNKGRPFYGCPKEFNNRCNFFQWADGGGSNTTTEWGASSSSSNTRGR
GRGRGGRGGGGGSDAGRGRRCGICRQEGHTRSRCPNANAD
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgagatatttgttttgcaatggatataaccttagtcgcagaattaatttgcgtttgtgt
acaaataaattgcctgtttttgtaataactaggtttaaatctgaaaccatgaagtattta
aatgttgctgagaagaatgacgccgcaaaaaatattgctgcccacttatctcgtgggaca
tcaagaaggcgtgaggggctgtctcaatacaacaagatatatgaatttgaagcggaggtt
atgggccagaaagctcagatggttatgacgtcagtatctggacacttactggcactagag
tttgttggatcgtataaacactggcaggcctgcaaccctttggtattgtttgatgcacct
gtgtttaagtattgccctgaaaattatgagaagataaagaaaactttagaaagagaagtc
cgaagctgtcaaggattaataatatggactgattgtgacagagaaggagaaaacataggt
ttcgaaattatacaagtttgcacagccattaaaagtaacataccagtgtacagagcaaag
ttctcagagatcacagccgtgtcggtgagaagggcactggctaacttagaacaacctaat
aagaatatcagtgatgcagttgatgtaaggcaggagttggacttgaggataggtgcagct
ttcactcggtttcaaacgctccgccttcagagggtgttccccacaaagcttgcagaaagc
ctggtcagctatgggtcctgtcagtttccaacactgggtttcgtcgtcgagcggtatcgc
gccgtggaagcattcgttgctgaaccattttggaagatcaaagtaaatcacacaatgaat
ggtctaagtgtggactttgcgtgggatcgagtccgtctcttcgaccgcgatgcttgtcaa
gttcttcacgacatatgcatggaaaatcctcaagctaaggtggtcgaggtcaagaccaaa
cccaagtctaaatggagaccgctgcctttggatactgtggaactagaaaaactaggatca
cgtaaattaaaaataaacgcaaaggaaacgatgcgattggctgagaagctctacacccaa
ggtttgatcagttaccctcgcacggagaccaatgagttcccgaaggaaatgaacctaggt
caactggtggggctacaaacgggggaccctaactggggggccttcgcgcagggcatcctg
gacagcggggggcccacgccgaggcagggcaacaagagtgataaggcccatcctcctata
catccgacgaagcataccaatagtctttccggcaacgaacagcggctctacgaattcata
gtccggtctttcctcgcgtgttgttccaaggacgcgcaaggtcaagagacgaccgcttct
atagacgtggccggagaacgattctctgccagcggactcatgatcactgccaggaactat
ctggacgtctacccgtatgacaagtggtcttctaaagagattcatgtttatcagaatggt
caaacattcaatcctacgagtatagacatgctagacggcacgacgtcacctccaaacttg
ctgactgaagctgacctcatcgcgctcatggagaaacatggcattgggacggacgcaacc
cacgccgagcacatagaaacaataaagagccggtcgtacgtagcgctagcggacgcgatc
catttcgtgccggggctgctaggcatgggcctggtggaggggtacgacgctatggggctc
aatatctccaagccgcacctgcgcgctcagttggaggccgaccttaaagctatcagcgag
gggaggaagcaaccgcaggttgttttggctgaacagatagcgaagtacaaggaagtatac
ctaacagtgacggcggaggcgaacaagattgacgcggcgctcgccgagcggttcagcgaa
cgacccaacgagtacacgcccagcgttgagaacatgccggacatgccctcagctctgaaa
tgccccaagtgcggctcggacatggtggtgcgtcctaagaagaacagcgacgagtttttc
atcagctgtatatcgtttcccaagtgcaagaacgcggtgtggttcccgaccatcgtcaag
acgttgcaagtcctacctgattcctgtccttcgtgtggtcccaactacaagaagatcaaa
ttcgaatggagaaacaattcaataagccatttatacccgcctccatatgtcggctgcatc
ggcggttgcgacacgacattcttagaactactcaaaatcaacttatcttcagtcagaaac
ttagggaaccgaactcaacaaaccggaacaaataacactataaccggtctaagtacaaga
gacactactagcacaatggttcccgcaccatcgagaaccaatcaaactaggccgaataat
actcaaactaggcctgccaaccagccaagacagactgtcaattcacagccgaggcaattt
ctacctccaccaacggtaaatagaggtcaaaatgccgggcccaggatgccggcgccgcgg
ggaagtggagaccctgatgacaataatgttatctgtgggtgcaacaaagcggccattttg
cttactgtgaggaaacaaaatgctaactgtggcaagaaattttacaagtgcccagatggt
ggatgcgattttttcctatgggcacctgaatctttagaaacgggcactaataacttcgat
acacctccagcctccaattcatggaatgcaaataatgcaagtcaaaataattctggttgg
gggaatgactctggtaatagtcggggcaatgcgcaaaatagtacaagggggtggggcatt
acacctagctcctcgagagatagctatcctagcaatgaagatgatgtcatgtgcaattgt
ggcgtgccctgtaagaaagtaacagttcataaagagggtccgaacaaagggcggccgttc
tacgggtgtccgaaggaattcaataatcgctgcaatttcttccaatgggctgatggcggc
ggttcgaacactactactgagtggggagctagcagtagcagcagtaacactagaggtcgc
ggtcgtgggcggggaggcaggggtggcggcggggggagtgacgccgggcgcgggagaagg
tgtggcatctgtcgacaggagggacacactcgcagccgctgtcctaatgccaatgctgat
taa
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