Pectinophora gossypiella (pink bollworm): 126369857
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Entry
126369857 CDS
T09293
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126369857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgw04121
]
126369857
Enzymes [BR:
pgw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
126369857
Ubiquitin system [BR:
pgw04121
]
Ubiquitin ligases (E3)
HECT type E3
126369857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Peptidase_C25_C
Motif
Other DBs
NCBI-GeneID:
126369857
NCBI-ProteinID:
XP_049870394
LinkDB
All DBs
Position
9:complement(5611719..5631477)
Genome browser
AA seq
1038 aa
AA seq
DB search
MFCWGNATHHELYVEGPENIDLIIKPTLSKWRESSHLKLVAAGEFHTLYLTSQGSLYSCG
SNEVGQLGRNSHGKDGKSPVLVETFKGCTLTAIACGIQHSMALDEWGQPFSWGSDTMGQL
GSNLGVDSQDKPKIVKFLATKNVIQIDCGSYHSVALTNNGELYAWGANTYGQCGLGTMTS
KETTPQPITSLLGVPIALISCGNHHTFALSKSGAVFGWGKNTHGQLGLSDRENRCYPSHL
KTLRNVKVCHIACGEDFTVFLTLDGGVFTCGAGEYGQTGHGATRDELVPRKVMELMGSTV
TQVACGRRHLLCRVGDRILACGYGARGQLGCPHMAFALVPTPIPFTPNDESPFSPDTFSG
PIKVFAGWDHSFLLLNSTGPVDFRIPDPSRQILTLSVARLAACEVFKESDTVNQDLMAYL
ETVFGSLACVNGSFLLAQNAHYGCNTKVPGVDLKRAEEAFTLISRFENTSIKELIFNHLT
ENIIKKMKVSPPDAEALRMFLILPLYHEMRNPRRHPELQGPFAEAYNKLSTHPQRIVHLW
WEAQTPEYFEMLVDIFKSVIVYELMQPSVRANKKIYFTHSIIQILNTLASLNKINFTNPK
KPKIPAECFYIDELCNYVDIATDYINWLSDQDSSQPHMCNYAFLFDVTCKSLLLKIDQQI
QMQMAISRAATQIFTRLFMDPTYEYHRDQFLNLTVSRNHIVRDTMLQISNHDTSQLKKPL
RVEFVGEEAEDAGGVRKEFFLLLLKEIFDPVYGMFQTSDETNMIWFSNNPFEDDVMYYLI
GAIYGLAIYNSIIIYVPFPLVLYKKLLGESVMLDDLSDIYPTLANSLKSLLDYPDNDVEE
VFSLCFAVNTVVFDQIHVHPLKDDGVNIPVTHENKQEYVELYVDFLLNKSVENQFKAFNK
GFQKVCGGRIIKLFRSHELMSVVIGNEEYDWDMFESNCDYKNGYSATDKEIRWFWEVFHE
LSIEDKKKFLLFLTGSDRVPVQGMRDIKIRIQPVADDRYYPVAHTCFNLLDLPRYKTKER
LKYYLTQAIQQTQGFSLV
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgttttgttggggtaatgcaactcatcatgaactctatgtagaagggcctgagaatatt
gacttgattataaaaccaacgttatcaaagtggcgggagagtagtcatttgaagctggtg
gctgcaggggaattccatacactatacctcactagtcagggatccctatactcatgcgga
agcaacgaagttggtcaacttggccggaacagtcatggcaaggatggcaaatctccagtt
ttagtagaaacattcaaaggatgcacattgacagcaatagcatgcggcattcagcattca
atggctctagatgaatggggccaaccattcagttggggctctgacaccatgggacagctt
ggtagtaacctcggtgtcgacagccaggacaaaccgaaaatagtcaagttcctagcaaca
aagaatgtgatacaaattgattgtggttcataccattccgtagcgttaacaaataatggg
gaactttatgcatggggtgcgaatacatatggacagtgtggtctaggcactatgacaagt
aaagagaccactccacaaccaatcacatccctgctgggtgtacctattgcactcatttcc
tgtggtaaccaccatacctttgcactttccaaatccggcgccgtatttggttgggggaaa
aacacgcacggacaattaggactatcagacagggaaaacagatgttacccatcgcatttg
aaaacattgaggaatgttaaggtgtgtcacatagcatgtggagaagacttcacggtgttc
ctcaccctggacggaggtgtcttcacgtgtggcgcgggggagtacggtcaaactggccac
ggcgcaacaagggacgaacttgtgcctagaaaggtgatggagctaatgggcagtacagtg
acgcaagtggcttgcggtcgtcgccacctgttgtgccgagtcggggatcgaatcctggcc
tgcgggtatggcgcccgggggcaacttgggtgcccgcacatggcttttgcgctcgtacct
acgccgatccccttcacacctaatgatgagtcgccgttctcaccagatacattcagcggg
cctatcaaagtgttcgccgggtgggaccacagctttctactgttgaacagtaccgggccg
gtagatttcaggatacctgacccctccagacagattctgaccttgagtgtggccagactg
gctgcctgcgaggtgttcaaggaatctgataccgtcaaccaggacctgatggcttacctg
gagacagtgttcggctccctggcctgtgtaaacgggtcattcctcttggcccagaacgct
cactacggctgcaataccaaggtccccggcgtcgacttgaaaagggccgaagaagcattc
acgcttatcagcagatttgagaatacctccatcaaagagctcatattcaaccatctaaca
gagaatataataaagaagatgaaggtgtcgccgccggacgcagaggcactgcgcatgttc
ctcatactgccactttatcacgaaatgcggaacccgaggcgacatcctgaactacaggga
ccatttgcagaggcatacaacaagctatcgacgcacccgcaacggatagtacacctatgg
tgggaggctcagacgccggagtactttgaaatgctggttgatatattcaagagcgtgata
gtttacgaattgatgcaacccagcgttcgagccaataagaaaatctatttcacacacagc
ataatacaaattctgaacacattggcgtcgctgaacaaaatcaacttcacgaatccgaag
aagcccaaaataccggcggaatgtttctacatagacgaactttgcaactatgtggacatt
gctacagactacattaactggctttctgatcaggattcctcccaaccacacatgtgcaac
tacgccttcctattcgacgtgacctgcaagtcacttctactcaaaatcgatcagcagatc
caaatgcaaatggctataagccgagctgccactcagatcttcactcggttgtttatggac
ccaacatatgagtaccatagagaccaattcctgaacctgacggtgtctagaaaccacata
gtgcgcgacaccatgcttcagatcagtaatcatgatacttcgcagctgaaaaagccgctt
agggtagaattcgtaggagaagaagcagaagacgcaggtggtgttaggaaagagttcttc
cttctactgctgaaagagatcttcgacccggtgtacggcatgttccagacttctgatgaa
accaacatgatttggttctccaacaaccccttcgaagatgacgtcatgtattacttgatt
ggtgcgatctacggcctagcaatatacaattcgataataatctacgtgccattccctctg
gttctatataagaagttgctcggcgagtctgtcatgttggacgacctctcagacatatat
ccaactctcgccaacagtttgaagagcttgctggattatcctgataatgatgttgaagag
gtgttcagcctgtgcttcgcggtgaacactgtggtattcgaccagattcatgtccacccg
ctaaaggacgacggcgttaatataccggtgacgcatgagaacaaacaggagtacgtagag
ctgtacgtagactttctgctcaacaagtccgtggagaatcagttcaaggcgttcaacaaa
ggcttccagaaggtatgcggcggcagaataataaagttgttccgttcgcacgaactgatg
tcggtggtgattggcaacgaggagtacgactgggacatgttcgagagcaactgcgactac
aagaacggatattccgccaccgataaggaaatcagatggttctgggaagtgttccacgag
ttgtcgattgaggacaagaagaagttcctactgttcctcacgggcagcgacagagttccc
gtgcaaggcatgagggatattaagataaggatacagccagtagcggacgacagatattac
ccggtcgcccacacgtgcttcaacctgcttgacctcccccggtacaagaccaaggagcgc
ctcaagtactacctcacgcaggccattcaacagactcagggcttctccctagtctga
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