Pectinophora gossypiella (pink bollworm): 126370041
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Entry
126370041 CDS
T09293
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw04140
Autophagy - animal
pgw04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
126370041
04148 Efferocytosis
126370041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgw04131
]
126370041
Membrane trafficking [BR:
pgw04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
126370041
Hops complex
126370041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
126370041
NCBI-ProteinID:
XP_049870638
LinkDB
All DBs
Position
10:12125659..12145234
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AA seq
835 aa
AA seq
DB search
MSALLTADWFQLDSYYRKFDLYTMVWEMDEGLENMIVSGAPYGGPIAVVRDRKQFVRIMT
TSKPVITIYNCVGTVISKILWNSGALVHMGWSDGEQLLCIQESGDVLIYDMFGAYQRTFS
LGQEVRDTKVCKAQLFPNPHGVGLAVITTTNRMFLLSNVAEPKVRSVPDLPRANEPITSW
CVLSTGLRNSAVIGFLVCRDKEIYKCQLGESRAVLMRPDISNPYTQILTMVPSQNGRHVA
LLTDSGFLWLGSSDFKSKYCEIDTGYIKQPKELVWCGSQAIVGHWDDTMVVYGFNGNAYP
YPYDGPFHIIPEMDCVRVISESTHELIQKVPVVVEKIFRINSAAPGSYLLEASKQFQKRS
HRADEYIRLVKPDLSNAVQDCIDAAAFEFSPDVQKMLIRAAQFGKGFIIDPVLTDHYVKT
CRWLRVLNAIRDPKVAIPLTFLQVQNLGERVLLDRLIWRRLHCLAGHIASYLQIKEGHTR
VLSHWACYKVTQPHLDNESAAREIGQKLRNVPGVSYATIAMKAAEKGRKSLAIKILEYET
HSKLQVPLLLALGEGPTALLKATASGDTDLVYTVLLHLKEKMGKHEFELTIRSFPLAHAL
YIKYCASHNREALRKVYVQEDDFHGQAATHIRDAIDQTNPGSAEASLISARECYKKGKND
LGVSICEDARKLCKQQSSLQETYGESFIGLSLHDTVQKLLLLGEVKLADKLRSEYRMPDR
RYWWLRILILAERSEWGELDKFSKWKKSPVGYEPFVDACLKHNKSDEALKYLPRCRDDIK
VKYYVKAGFYEEAAQVAFEQKDEGALAFVQSKCPIRETLKQERIAALIEQLATRK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgttactgactgccgactggtttcagctggactcctattacaggaagttcgac
ctgtacacaatggtgtgggagatggacgaagggttggagaacatgatagtgagcggggct
ccatatggaggtcctatcgctgtggtacgagacaggaagcagttcgtgagaatcatgacc
acgtccaaacctgtcatcactatctataactgtgttgggactgttatatctaaaattttg
tggaacagtggagctctggtgcacatgggctggtctgacggagagcagctactatgtata
caggagagcggagatgttttgatttacgacatgtttggtgcctaccagcggactttcagc
ttagggcaggaagtcagggataccaaggtatgcaaggcgcagttgttcccgaacccacac
ggggtggggctggcggtgatcaccaccaccaaccgcatgttcctgctcagcaacgtcgcc
gaacccaaagttagatccgtgccggacttaccccgagccaacgagcccataacatcatgg
tgcgtgctcagcacggggctccgcaactcggccgtgatcggcttcctcgtgtgcagagac
aaggagatctacaagtgtcagcttggagagtcgcgcgccgtgctcatgcgtccggatata
agcaacccatacacccagatcctgacaatggtgccgtctcagaacggacgccacgtggcg
ttgctgactgactcagggttcctctggctcggctcctccgacttcaagagcaaatactgc
gagattgacaccgggtacatcaagcagcccaaggagcttgtttggtgtggatcgcaggcg
atagtaggccattgggacgacacgatggtcgtatacgggttcaatggaaacgcgtaccca
tacccttacgacggacccttccatatcatccctgagatggactgcgtacgagttatatca
gagtctacacacgaactcattcaaaaagtaccagtggttgttgaaaagatatttagaata
aacagcgcagcgcccgggtcctatctattagaggcctctaaacaatttcaaaaacgcagc
cacagagcagacgagtacatccgcctagtgaagccagacctctcgaacgcggtgcaagac
tgcatagacgccgctgccttcgaattcagtcccgacgttcagaagatgctgatccgcgcg
gctcagttcggcaagggcttcatcatagacccagtactgaccgaccactatgtcaagacc
tgtcgctggttgagggtgctgaatgcgattagggatcccaaagtcgctattccgcttact
ttcttgcaagtacagaacctaggtgagcgcgtgctactagaccggttgatctggcgtcgc
ctgcactgcctggccggccacatcgcctcctacctgcagatcaaggagggccacaccagg
gtgttgtcacactgggcttgctataaggtgacccagccgcacctagacaacgagagcgcg
gcgcgcgagatcggtcaaaagctccgcaacgtgccgggcgtgtcgtacgccaccatcgcg
atgaaggccgccgagaagggacgcaagtcgcttgccatcaagatcttagagtacgaaacc
cacagcaagttgcaagtgccgctgctgctagcgttaggagaggggccgactgccctgctg
aaggcgacggcgagtggcgacaccgacctggtgtacaccgtgctgctgcaccttaaggag
aagatgggcaaacatgagtttgagctgaccatccgaagcttcccgctggcgcatgcgctg
tatataaagtactgcgcgagccacaaccgcgaggctctgcgcaaggtgtatgtgcaagag
gacgacttccacggacaagccgccacccacatcagggacgccatagaccaaactaacccg
ggcagtgccgaggcctcgcttatatccgcccgggagtgctataagaagggcaagaatgac
ttgggagtatcaatatgcgaggacgcgcgcaagctgtgcaagcagcagtcgagcctgcaa
gagacgtacggcgagagcttcatcgggctctcgctgcatgacactgtgcagaaactactg
cttctgggagaggtgaagctcgcggacaagctgcggtccgagtaccggatgccggataga
agatactggtggctaaggatcttgatactagcagagaggagcgagtggggtgaactggac
aagttctccaagtggaagaagtctccagtgggatacgagccatttgtggacgcgtgtctt
aaacataacaagagcgatgaagccctcaagtacctgccgcggtgccgagacgatatcaag
gtcaaatattatgttaaggctgggttctacgaggaggccgcacaagtagcgttcgagcag
aaggacgagggagcattagcgtttgtacagagcaagtgtcctatcagggagaccctcaaa
caggaacgcatcgccgcgctcatcgaacaactcgccaccaggaagtaa
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