Pectinophora gossypiella (pink bollworm): 126370090
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Entry
126370090 CDS
T09293
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant
KO
K14407
cleavage stimulation factor subunit 2
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126370090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgw03019
]
126370090
Messenger RNA biogenesis [BR:
pgw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
126370090
U7-dependent histone pre-mRNA processing factors
126370090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
126370090
NCBI-ProteinID:
XP_049870767
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Position
10:complement(11232997..11241029)
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AA seq
387 aa
AA seq
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MDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKG
YGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQIENPYGDPV
EPEKAPEAISKAVATLPPEQMFELMKQMKLCVQNNPTEARNMLLQNPQLAYALLQAQVIM
RIVDPATAVTMLHPSNPVPPVIQPGDKPPISNPYMSSNSSQAQQQQPPLLANPVPPPNQY
APARPALGDVDLRGGRAAPALPALLDQDMRALPPLPHPVPPPLQQDSGFPRDPRLANMQG
FNSDPRVRPTDPRTQNKMPPQMPPGMPSVAQARTIQGIPSGASDQEKAALIMQVLQLSDE
QIALLPPEQRASILMLKEQIAKSTQQR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggacaagagtaaagaaaaagaagaacaaagtatcatggataaatccatgagatcagta
tttgtgggtaatataccttatgaggctacggaggagaagctgaaggacatcttcagtgaa
gtggggccggtgttgtcgttcaaactagtgtttgaccgggagacgggtaagccgaaaggt
tatgggttctgtgagtacaaggatcaggagacggccctcagtgctatgcggaacttgaac
ggctatgagatcggcggccgctcccttagagtagacaatgcctgtactgaaaaatctagg
atggaaatgcaagctctcatgcaggggccacagatagaaaatccttatggagacccagtg
gagcctgaaaaggctccagaggctatcagcaaggctgtggcgacgttgcctcctgaacag
atgtttgagctcatgaaacagatgaagctgtgtgtacagaataacccaactgaagccagg
aatatgctgctccagaaccctcagttggcatatgcactacttcaagcacaagtcatcatg
aggattgtagaccctgccactgcagttactatgctgcaccccagtaaccccgtgccacca
gtgatccaacctggtgacaagcctcccatctccaatccatacatgtccagcaattcatcc
caagcacaacaacaacaaccgcccctactggctaaccctgtgccaccacccaaccagtat
gccccggcgcgaccggcgctgggcgacgtggacttgcgcggcgggcgcgcggcgccggcg
ctgcccgcgctactggaccaggacatgcgcgcgctgccgccgctgccgcaccccgtgccg
ccgccgctgcagcaggacagtggtttcccgcgggacccgcgcctggccaacatgcaaggt
ttcaactcggacccccgcgtgcggcccacggacccgcgcacacagaacaagatgcctcct
caaatgccacctggcatgcccagcgtagcgcaggctagaaccatccaaggaataccgtct
ggtgcctcagatcaagagaaggctgcgttgataatgcaagtgctgcagttgtcagatgaa
cagatcgccctgctgcctccggaacaacgcgccagcattctcatgctgaaagagcaaatc
gctaagagcacgcagcaacgttga
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