Pectinophora gossypiella (pink bollworm): 126370196
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Entry
126370196 CDS
T09293
Name
(RefSeq) fibril-forming collagen alpha chain-like
KO
K19719
collagen type II alpha
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw04512
ECM-receptor interaction
pgw04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126370196
04518 Integrin signaling
126370196
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pgw00536
]
126370196
Glycosaminoglycan binding proteins [BR:
pgw00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126370196
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
NELL_VWC_C
PSP94
FnI_RECK
Motif
Other DBs
NCBI-GeneID:
126370196
NCBI-ProteinID:
XP_049870916
LinkDB
All DBs
Position
10:3568249..3588332
Genome browser
AA seq
1509 aa
AA seq
DB search
MLWQAGAWLVLLLLAGAAAKEVTGMEMTGKEVTDKELDVHDVPQAQDPDTDNYDDYNPFG
EDENALIAERDFRGSVTTSNPGIRRPPSLPTATILPQTPKCVDIGRAWFEGETWKRDNCT
LCQCYGGRINCSVLPACLQAPATGRPSYNVNAAATTPVRGVPGHPGEEGPSGPPGAPGVN
GVPGAPGMPGATGPMPDVNAYLAQLAASSGGGDKGPAFDPYQYMQASVGAPGIRGVQGPQ
GPPGPQGFQGPRGEPGEPGLPGLQGPPGERGPQGPPGKDGSPGEDGEPGPAGAVGQTGPR
GAPGVPGIQGLKGHRGFDGKDGAKGDQGLPGEKGPTGLPGQMGPTGPIGPVGPRGERGRE
GSPGAPGMRGADGAAGPPGPVGNVGKPGAPGFPGTTGLKGEQGSVGPKGSQGVQGVRGEA
GRPGQPGDVGAPGIAGRDGIPGEKGVQGQPGATGPQGFPGPRGTPGVAGDPGVPGTKGMP
GQPGERGLKGDSGPRGESGSPGPRGLPGTVGPEGKRGKRGLRGPAGNVGPQGERGLQGMR
GLPGSDGPMGVKGQPGERGGVGLSGSKGSTGDPGRPGLQGLQGPRGAIGRPGIAGKTGPP
GERGIPGADGRPGEQGPQGLQGPPGLTGSPGDRGLQGEPGKDGDPGQAGPQGPKGDPGRD
GSPGIQGQQGPSGPSGDRGPPGPSGPTGFPGMPGAAGLPGSPGKDGEPGVAGPAGPPGQA
GPRGERGFLGERGQPGPQGSPGEKGDAGSQGSEGPPGPEGPRGAKGHPGPLGAMGMPGPR
GLTGPSGEKGERGASGPTGNDGPPGRQGEQGPQGPVGPAGPPGEPAERGEPGAPGVPGEA
GAPGSPGERGQPGLQGSPGLPGSPGLTGMPGLKGDRGYAGAKGQQGSPGSPGIAGEPGLR
GLPGLAGAKGARGEQGHKGEVGHAGLPGRPGEVGPPGPQGSTGPAGAPGIPGAKGSAGDT
GRPGPAGPQGNTGPSGPEGPKGERGSEGEQGPQGLSGPPGPAGERGPSGMPGMGGPPGPQ
GLRGTQGETGAPGKPGADGAPGPVGSPGLQGPPGPMGEMGPEGRAGKQGQPGIPGRPGDK
GPQGQPGISGPSGPPGQMGPPGPAGPTGPAGERGQRGETGLPGADGPPGPAGKQGPAGLD
GAKGERGEAGGDGAKGHAGLPGLPGLMGAPGRQGERGLPGPSGMPGKDGEPGSRGPPGRD
GSPGPQGPPGPPGARGPAGDAGRHGAPGPAGPPGPPGPPGEGLAYDAAAIAAMLQQGSVK
GPDPLGDDPNMPARFFKEDMTPAERKEIVMKAYERLKVSLDKFLKPDGSKEAPAKTCGDI
KYHHPTFKSGQFWVDPNGGDANDAILVHCDLDVGATCIYPKPMQSQDITYRGRDKEAWLS
EMEEGFTITYKADHTQLTYLQLMSTSAVQNVTFHCKNTVGYFDPGSNNYRRGLKLLAYND
AEILPRANNRLRYKALLDECQYKKQDWAQTIVQYETDKAARLPVLDVGVRDVGRPNQMFR
IELGLACFR
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atgctctggcaagcgggcgcgtggttggtactgctgctgcttgcgggggcggcagccaag
gaagtgaccggcatggaaatgacaggcaaggaagtgacagataaggagctagacgtccac
gacgtgccgcaggcgcaggaccccgacactgacaactatgacgactacaaccccttcggg
gaggatgagaatgctctgatagctgaacgagacttcagaggatctgtaacgacaagtaat
cctgggataaggcgacctccgtccttaccgacggcgacgatcctaccgcaaacaccaaaa
tgcgtggacattgggcgggcgtggttcgagggcgagacgtggaagcgagacaactgcacg
ctctgccagtgttacgggggccgcatcaactgctccgtactgcctgcttgtctccaagct
ccagccaccggtagaccgtcatacaacgtgaatgcggcagcaaccaccccagtgcgggga
gttcctggtcaccctggggaggagggcccttcaggtcccccgggggcccccggggtcaac
ggagttcctggtgcgccggggatgcccggagccactggacctatgcctgatgtaaatgca
tacttggctcaactcgcggcgtcatcaggcggtggcgacaagggaccagccttcgacccc
taccagtacatgcaggcttctgttggtgccccgggaattagaggagtacaaggtccacaa
ggcccgcccggtccacaaggtttccaaggtccccgcggagagcccggcgagcccggtctc
cccggactacagggacctcccggtgaaagaggacctcaaggaccaccaggcaaagatgga
tccccaggcgaagatggcgagcccggtccagcaggcgcggtgggtcaaactggacctaga
ggtgctccgggagtccctggcatccagggtctaaaagggcatcgcggtttcgacggcaag
gacggcgctaagggcgaccaaggacttccaggcgaaaagggacctacgggtttgcctgga
caaatggggcctacaggacctattggtccagtgggtcctcgaggtgagcgtggtcgcgag
ggatcccccggagcccccggcatgcgcggagctgatggcgctgccggtccaccgggacct
gtgggcaatgttggtaaaccaggcgccccaggattcccaggaactacaggattgaaaggt
gaacaaggatccgtggggcctaaaggcagtcaaggggtgcaaggagtgcgtggtgaggct
ggcagaccaggtcagccgggagacgtcggtgcgcccggaattgctggcagagatggcatc
ccaggagagaaaggtgtccaaggtcaacctggagcaacaggaccgcaaggatttcctgga
cctagaggaactcctggcgtggctggtgatcctggagttccggggactaaaggaatgcct
ggtcaaccgggtgaaagaggtcttaaaggagacagcggaccacgcggagaaagcggttcc
cccggtcctagaggtctacctggcacagtcggacccgaaggcaaacgcgggaagagaggt
ttgcgaggacctgcgggtaacgttggacctcaaggcgagaggggcttacaaggaatgagg
ggtttaccaggatcggatggtccgatgggggttaaaggtcaaccgggagaaagaggaggt
gtgggtttatctggatctaaaggaagcactggagatcctggaagacctgggctacaagga
ctacaaggacctagaggtgcaataggcaggcctggtatcgctggcaagacgggacctcct
ggtgaaagaggcatccctggcgctgatggacggccaggcgagcaaggacctcaaggactg
cagggcccacccggactgactggcagtcctggagacagaggcttacagggcgaaccgggt
aaagatggcgaccctggtcaagcggggccacagggacctaaaggcgaccctggacgtgat
ggcagtccgggtatccagggacaacaaggaccttcaggcccctctggagataggggacct
cctggaccttctggtccgactggatttccaggtatgcccggcgcagctggtctaccagga
tccccgggtaaagatggcgagccaggcgtggctggaccggccgggccgcccggacaggcg
gggcctcgtggtgaacgcggcttcctaggcgagcggggacaaccggggccacaggggtct
ccgggggagaaaggcgatgctgggtcgcagggatctgaaggcccaccgggtccagaagga
cctcgaggagctaagggtcaccctgggccccttggggctatgggaatgcctgggcctcgt
ggtttaactggtccatctggcgagaagggagaacggggcgcatccggacctactggcaac
gatggacctccaggtcgtcaaggtgaacaaggcccccaaggtcccgtaggtcctgcgggg
cctccaggcgagcccgccgagcgaggtgaaccgggagcccccggagtgccgggagaggcc
ggtgcgccaggctccccgggagaacgaggtcagccaggcctgcagggatcgccggggttg
ccaggatcgccgggcctcacgggcatgccaggattgaagggcgacagaggttacgctggg
gccaaaggtcaacaaggttcccccgggagtccaggtatcgctggagaaccaggtcttcgc
ggtttaccagggttggcgggggcgaaaggtgctcgcggtgagcaagggcacaagggggaa
gttggacacgctgggttaccgggccgccccggtgaagttgggcctccgggtccacaaggc
agtactggtccggctggcgctccaggcataccaggcgctaagggatccgccggtgacact
ggtaggcccggacctgccggtcctcaaggaaatactggaccctcaggtccggagggacct
aaaggagaacgaggaagcgaaggcgagcaaggtccacagggtttgagcggacctccaggc
cctgctggtgaaaggggccctagtggtatgcctggaatgggcggaccgcctgggccgcaa
ggattgcgaggaactcagggcgaaacaggcgctccgggtaaaccaggagctgatggtgct
ccgggaccagtaggatctccagggttacaaggacctcccggacccatgggtgaaatggga
cctgaagggcgagcgggaaagcaaggtcagccgggtatacctggcagacctggagataag
ggacctcagggtcaacctggaatttcaggtccgagtggacctcctggacaaatgggcccc
ccaggacctgcgggtcctaccggacctgccggggaacgcggacagcgtggtgaaacaggt
cttccgggggcagatggacctcccggacctgcgggaaaacaaggacctgcagggttggac
ggagctaaaggtgaaagaggggaggcaggaggtgatggggctaaaggtcacgcaggattg
ccaggattgcctggtctcatgggagcccccggtagacaaggagaaaggggactgcctgga
cctagtgggatgcctggaaaagatggggagcctggttctagaggtccacccggtcgcgac
ggtagccccggtccgcaaggtccgcccggtccccccggagcgcgaggccccgccggagac
gcgggtcgtcatggggcccccggcccggctggacctcccggcccccccggacctcccggg
gagggactcgcctatgatgctgctgctatcgctgctatgttacaacaaggttcagtaaaa
ggtccagatccattaggagacgaccccaacatgccagcacgattcttcaaggaagatatg
actccagctgaacgcaaggaaatcgtgatgaaagcgtacgaacgactgaaggtctcattg
gacaaattcctcaaacctgatggctctaaggaagctccggcgaagacctgtggtgacatc
aagtatcaccatccgacctttaagagcggtcaattctgggtggatccgaacggcggtgac
gccaacgacgcaattttggtacattgcgaccttgacgtcggagcgacttgcatctatcca
aaacccatgcagtcgcaggacatcacgtaccgaggacgggacaaggaggcttggctgagc
gagatggaagaaggatttaccatcacctacaaagcggaccacacccagctgacctacctg
cagctcatgtcgacgtcagctgtccagaacgtcaccttccactgcaagaacactgtcggc
tacttcgaccccggctccaacaactatcggcgaggcttgaagctgctggcttataatgac
gcggagatcctgcccagggccaataacaggctcagatataaggctctgctggatgaatgt
cagtacaagaagcaagactgggcccaaacgatagtgcagtatgagacagacaaagctgct
cgcctgcccgtcctggatgtcggcgtgcgcgatgtcggcagacctaaccagatgttcagg
attgaacttggtctcgcctgctttaggtaa
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integrated database retrieval system
