Pectinophora gossypiella (pink bollworm): 126370328
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Entry
126370328 CDS
T09293
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03018
RNA degradation
pgw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126370328
09123 Folding, sorting and degradation
03018 RNA degradation
126370328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgw03019
]
126370328
03041 Spliceosome [BR:
pgw03041
]
126370328
Messenger RNA biogenesis [BR:
pgw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126370328
mRNA degradation factors
5'-3' decay
Lsm complex
126370328
Spliceosome [BR:
pgw03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
126370328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Gemin6
Motif
Other DBs
NCBI-GeneID:
126370328
NCBI-ProteinID:
XP_049871138
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All DBs
Position
10:complement(6575668..6576166)
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AA seq
96 aa
AA seq
DB search
MASGLENYVNQTVSVITADGRNFIGTLKGFDQTINIILDESHERVFSSSTGVAQVVLGLH
IIRGDNIAIVGQIDESIDSRLDLGNIKAEPLGPIVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaggactcgaaaactacgtcaaccaaacagtttcagtgataactgcagacggt
cgtaactttatcgggactttgaaaggatttgatcagacaataaacataattttggatgaa
tcgcatgaaagagtgttttcttcatctactggcgtggcccaagtagtgttaggactgcat
ataattcgaggcgacaacatagcaatcgtcggacaaatagatgaatctatagacagcaga
cttgatcttgggaatataaaagctgaacctttagggcctatagtacactaa
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