Pectinophora gossypiella (pink bollworm): 126370471
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Entry
126370471 CDS
T09293
Name
(RefSeq) probable ATP-dependent RNA helicase pitchoune
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgw03041
]
126370471
03009 Ribosome biogenesis [BR:
pgw03009
]
126370471
Enzymes [BR:
pgw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126370471
Spliceosome [BR:
pgw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
126370471
Ribosome biogenesis [BR:
pgw03009
]
Eukaryotic type
90S particles
Helicases
126370471
Pre-60S particles
126370471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
126370471
NCBI-ProteinID:
XP_049871300
LinkDB
All DBs
Position
10:complement(7727112..7734244)
Genome browser
AA seq
463 aa
AA seq
DB search
MDVNKIVAESSYAMLEGKIDNRILHTLRSMGIEKPTRIQAETLPHFLLQKDIIGAAKTGS
GKTLAFLIPVVDSLIKFKFTRKHGTGCIILSPTRELALQTFEVLKKLLSDIDLSYSLIVG
GEKKVKDIMSLKKGANIVVSTPGRLLDHLQNTQEFNCTNLKCLVLDEADKLLEAGFEKHV
TGIIELLPKNRQTVLFSATIDGKVENLAKLALRSNPVLVSVSNNTQSTVAGLQQGYYVCP
VEMRIPWLYKMLKKSKKLKVMVFFSSCKSVDFHNEFFRLHCKANVLSIHGKQSQARRKET
YLSFVKAQSGALFCTDVAARGLDIPSVDWIVQYDPPTDPKEYIHRVGRTARGLSNTGNAV
ILLRPEEEPFVDFLRKQNVYLDKYSFGDPPGEVQEMLQQLIENNGVMKVLSRKAYLSFLR
CYKTHPLKKIFDINTLDLKMAAKAFGFLEQPHVDFLNKRKKKT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaaataaaatagtggctgagtcgagttacgcaatgcttgaggggaaaatagac
aacagaatcctccacaccttgagatcaatgggtatcgagaagccgacgagaatccaggct
gaaactttacctcactttctactacaaaaagatataataggagctgctaaaacaggcagc
ggaaagactctagcattcctcataccggtagttgatagcctaatcaagtttaagtttacc
agaaaacatggtactggttgcattatcttatctcctactagagagttggctcttcagaca
tttgaagtgttaaagaaattgctatcagacatagatttatcatatagtttgatagtcgga
ggagaaaagaaagttaaggatatcatgagtttgaagaaaggagcaaatatagtagtaagc
acgccaggtcgcttgttagaccatttacaaaacactcaagaatttaactgtacaaactta
aagtgcctagtgttggatgaggctgacaaattattggaggccggatttgagaagcatgtt
acaggaattattgaattattaccaaaaaatagacaaacagtcctgttcagtgcgacaata
gatggtaaagtggaaaatttagctaagttagctctgagaagcaatccagttttagtatct
gttagcaacaatactcagtctacagttgcagggttacagcaagggtattatgtatgtcca
gtggaaatgagaataccctggctctacaaaatgctgaaaaagagcaaaaaattaaaggtc
atggtcttcttctcatcttgtaaatcagtggattttcacaatgaattctttaggctccat
tgtaaagcgaatgttttgagtatacatggtaaacaaagtcaagcaagaagaaaagagaca
tacctcagcttcgtgaaagcacagagtggtgctctgttctgcactgacgtggctgctaga
ggattggacataccaagtgtcgattggatagtgcagtacgatccacctacagatcctaag
gagtatattcacagagtaggtcgtactgcgagagggttaagcaatactggcaacgcggtc
attctacttcggccggaggaggaaccgttcgtcgatttcttacgtaaacagaatgtttat
ttggataaatattcttttggtgatcctcctggtgaagttcaggaaatgttacaacaactt
atagagaacaatggagtaatgaaagttttatcaaggaaagcatacctctcttttctaaga
tgctacaaaacgcatccactgaagaaaatattcgacattaataccttggatttaaaaatg
gcagcgaaagcgtttggctttttggagcagccacatgtcgattttttgaataaacgaaag
aagaaaacatga
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