Pectinophora gossypiella (pink bollworm): 126370534
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Entry
126370534 CDS
T09293
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03022
Basal transcription factors
pgw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126370534
09124 Replication and repair
03420 Nucleotide excision repair
126370534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgw03021
]
126370534
03036 Chromosome and associated proteins [BR:
pgw03036
]
126370534
03400 DNA repair and recombination proteins [BR:
pgw03400
]
126370534
Enzymes [BR:
pgw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
126370534
Transcription machinery [BR:
pgw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126370534
Chromosome and associated proteins [BR:
pgw03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
126370534
DNA repair and recombination proteins [BR:
pgw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126370534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
AAA_11
nSTAND3
FliS
Motif
Other DBs
NCBI-GeneID:
126370534
NCBI-ProteinID:
XP_049871384
LinkDB
All DBs
Position
11:14269228..14287884
Genome browser
AA seq
760 aa
AA seq
DB search
MKLTVDGLLVYFPYDYIYPEQYAYMLELKRALDAKGHGLLEMPSGTGKTISLLSLIVAYM
VHNPHHVRKLIYCSRTLPEIEKVLEELKNLVKYYEEQQGEKPNLVGLVLSSRKNLCIHPD
VSKEREGKLVDGRCHSLTASYIRQKHETNNEIPICQFYEGFSREGKESMLPYGVYTMDDL
KQYGADRNWCPYFLSRFAIIHAEIVVYSYHYLLDPKIAEVVSKELNKQAVVVFDEAHNID
NVCIDSLSVKITRRTIDRSTQALTSLENTVAQIRQEDAARLAAEYEAMVEGLREAQLQRD
TDLILGNPILPDEVLNEVVPGNIRNAEHFLGFLRRFIEYLKTRLRLQHVVQESPAGFLKD
VAARVCIERKPLRFCATRLASLMRTLEIPDPSDLGSLTLITHLATLVSTYTKGFTIIIEP
FDDKTPTVSNPILHFSCMDSSIAMRPVFARFQSVIITSGTLSPLDMYPKILDFNPVVMSS
FTMTLARPCILPMVVSKGSDQVAISSKYETREDVAVIRNYGQLLVEIAAAVPDGVVCFFT
SYLYLESVVGAWYDQGVVASLQRHKLLFIETQDAAETSFALINYIKACESGRGAVLLSVA
RGKVSEGVDFDHHLGRAVLMFGIPYVFTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRALRGKTDYGIMIFADKRFSRADKRTKLPRWIQEHLKDSLTNLSTEEAVQICKRW
LRQMAQPFTREDQLGVSLLTLAQLQSKEQQDKIEKQVIQK
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaacagtggatggtttactggtttatttcccttacgactatatttaccctgag
caatatgcttatatgttggaacttaaacgagccctggatgctaagggtcacgggctgttg
gagatgccttctggaacagggaaaactatatcgcttctatccctgatagttgcctatatg
gttcacaacccacatcatgtcaggaagctgatttactgctcccgtacattgcctgagatt
gagaaagttctggaagagttgaagaaccttgtcaagtattatgaagaacagcagggagag
aaaccgaacctcgttggtctcgtactcagctcacggaagaacctctgcatacaccctgat
gtgtcaaaagaacgcgagggtaagctggtggacggccgctgccactcgctgaccgccagc
tacattcggcagaaacacgagactaacaatgagatacctatatgccagttctatgaaggg
ttcagtcgtgaaggcaaggagtcaatgttaccatacggagtgtacactatggatgatctg
aaacagtatggggctgatagaaactggtgtccgtatttcctctctagatttgctataatc
cacgccgagatagtggtatactcgtaccactacctgctcgacccgaagatagccgaagtg
gtgtcgaaggaactaaacaagcaagcggtggtggtgttcgacgaggcccacaacatagac
aacgtgtgcatagactcgctcagcgtcaagatcacgcggcgcaccatagacaggagcacg
caggctctcacctctctcgagaacactgtcgcacagatccggcaggaggacgcagcgcgg
ctggcggcggagtacgaggccatggtggaggggctgcgggaggcgcagctgcagcgcgac
accgacctcatcctcgggaaccccatcctgcccgacgaggtgctcaacgaggtagtgccg
ggtaatattaggaacgcggaacatttcctcggcttcctgagaaggtttatagaatacctg
aagactagactgcggctccagcacgtggttcaagagtcaccagcgggtttcctgaaagac
gtggcagcgcgcgtgtgtatagaacgcaagccgctcaggttctgcgcgacccggttggcc
tccctcatgaggaccttggagatcccggacccctccgacttggggtccctcacactgata
acacacttggccacactagtgtcaacgtatacaaaagggttcacgatcattatagaacct
tttgatgataaaaccccaacagtgtcgaaccctattctgcacttttcatgtatggactct
tcaatagcgatgcgacccgtgttcgccaggtttcaaagcgtcatcatcacgtctggcacg
ctatcacccctggacatgtacccaaagatcctggacttcaaccccgtcgtgatgagctcg
ttcaccatgacgttagccaggccctgtatactgcccatggtggtgtcaaaaggtagcgac
caagtggcgatctcctctaaatacgagacaagagaagatgtggcggtcatcagaaattat
ggacagctacttgttgagatcgcagcggcggtccccgacggcgtggtatgtttcttcacg
tcatacctgtacctggagagtgtggtcggcgcctggtacgatcaaggcgtagtggcgagt
ttacaacggcacaagttgctgtttattgaaacgcaggatgccgctgagaccagtttcgct
ttaattaattatattaaggcgtgcgagagcgggcgcggcgcggtgctgctgtcggtggcc
cgcgggaaggtgtcggagggcgtggacttcgaccaccacctcggccgcgccgtgctcatg
ttcggcatcccctacgtgttcacacagagccgcatactcaaggcgcgcctcgagtacctc
agggaccaattccagattcgcgagaatgacttcttgacgttcgacgcgatgagacacgcc
gcacagtgcgttgggcgggcattgcgaggcaagacggactacggcataatgatcttcgcg
gacaagcggttcagccgcgcggacaagcgcaccaagctgccgcgctggatacaggagcac
ctcaaggactcgctcaccaacctctccacggaggaggcagtgcagatttgcaagcgctgg
ctgaggcaaatggcgcaaccgttcacgagggaagaccagctcggcgtgtcactgctcacc
ctcgcacagctacagtcgaaggaacaacaggataagattgagaaacaagtcatacaaaaa
tga
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integrated database retrieval system
