Pectinophora gossypiella (pink bollworm): 126370849
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Entry
126370849 CDS
T09293
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33-like isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126370849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgw03019
]
126370849
Messenger RNA biogenesis [BR:
pgw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
126370849
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
EIF3I
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_EIPR1
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_WDR11_2nd
WD_LRWD1
Frtz
Motif
Other DBs
NCBI-GeneID:
126370849
NCBI-ProteinID:
XP_049871887
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Position
11:complement(16356223..16369752)
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AA seq
844 aa
AA seq
DB search
MDFGQPPPNMGMPPPGMGGPMGPPLGPPGRNNMRHNFRPFNYQMRFPPQGPLNMTQDDFD
GKRLRKSVMRKTVDYNAAIIKALECRVWQRDWRDRHALQPDAMYTPDLMPPPSYPDNPIN
AVTTRFVKTATNKMRCPIFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPV
RSMVWSHGEGWMVTGDHSGFIKYWQSNMNNVKMYQAHKEAVRGISFSPSDAKIVTCSDDG
TLRIFDFYRCQEERILRGHGADVKCVQWHPTKALIVSGSKDNQQPIKLWDPKSGTALSTL
HAHKSTVMDLKWNDNGNWLITASRDHLLKLFDIRKLGTELQIFRGHKKEASSVVWHPTHE
GLFCSGGSDGAILFWNVGTDKEVGCIEGAHESIVWTMAWHPLGHILCSGSNDHTSKFWTR
NRPGDLMRDKYNLNTLPPGVQDDHDLEEPAVIPGMGPEDKVELFPSDTDKVIPGLDLDTT
LIPMEFEKKVKKVPYSKPIPRNFQAQWNHGPSADDATTEALTQALVESVPGAVPLQQITP
SAIFIYGKLIPVDPGSKLEKAIIDGPLALKKYIATGELEELHEVMPHLEEDADDDNFPPF
EYPDPEDNNDSNENEGNDKDNYNQDEEYYDQEMEANNQNDEDDYNNYNNGPDVNNMGPMP
PNMPPPMGNMMRPPMPMGPPMGPGMGPPMGPGMGPMGPMHMGPPPPMGGLPPMGSMPPMG
NMPPMGNMPPRPPFSDNGYNKGGYDNQYQQNNEEYNEEESYDQNYDDENYNEDGEGEEGG
YDGRQNQRWGGGYRGRGRGRGRGMNGHGGRGNWRGNSGGRGAPWNRRGGGANRGFRRGGK
PIPN
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggatttcggtcagcctccaccgaatatggggatgcctccacccggcatgggtggtcct
atggggccgcctttaggcccgcccggccgtaacaacatgcgccataattttaggcctttc
aactaccagatgcgcttcccacctcagggtcctctgaatatgacacaggatgatttcgac
ggtaaacgcttacgtaaatcagttatgcgtaaaactgtagactataatgctgcgattata
aaagctttagagtgtcgcgtgtggcagagggactggcgcgacaggcacgcgttgcagccc
gatgctatgtacaccccagacctgatgcctccgccgtcgtaccccgataatccgataaac
gcggtcactactcgttttgttaagacagctactaataagatgagatgtcccatattcgct
gtagcgtggacgccggaaggtcgaaggttaatcactggagcgtcatctggagaatttacg
ttatggaatggtctgacatttaacttcgaaactattctacaagctcatgactcaccggtc
agatcaatggtttggtcacatggggaaggatggatggttactggtgaccactctggattt
atcaaatattggcaaagtaatatgaacaatgtaaaaatgtaccaagctcacaaggaagct
gtcagaggaataagttttagtccgagtgatgcgaaaattgttacatgttctgatgatgga
accttgcgcattttcgacttctatagatgtcaagaagaaagaattctaagaggccatggt
gcagatgttaaatgtgttcaatggcacccgactaaagctctcattgtatcaggaagcaaa
gacaaccaacagccaatcaagttatgggatccaaaatcaggaactgctctttctactctt
cacgcacataaatcaactgttatggatttgaaatggaatgacaatggtaactggcttata
actgcttcccgagaccatttgctcaaattatttgatattcgtaaacttggcacagaatta
caaatatttagaggccataagaaagaagcatcaagtgtagtttggcaccccactcatgaa
ggattgttctgttctggtggatctgatggagcaatattgttttggaatgttggtactgac
aaagaagtgggatgcatagagggtgcccatgaatctatagtttggactatggcttggcat
cctcttggtcatattttatgctcaggctctaatgatcacacatccaagttctggactcgt
aaccgacctggtgacttgatgagagacaaatataatttgaataccttgcctcctggtgtt
caagatgatcatgacttggaagaaccagcggttattccaggaatgggtccagaagataaa
gtggaattgtttccttcagacactgataaagttattcctggtcttgatttggatactaca
ctcattcctatggaatttgaaaagaaagttaaaaaggtaccatatagtaagcccattcca
agaaacttccaggctcagtggaatcatggtcccagtgctgatgatgccaccaccgaggcc
ctgactcaagctctagtagaatctgtcccaggtgcggttccgcttcaacaaatcactcca
tcagctatatttatttatggaaaattaatacctgtagatccaggttctaaattagagaaa
gctattattgatggacctttggcattaaagaagtacattgctacaggtgagctagaagaa
ttacatgaagtaatgccacatttggaggaagatgctgatgatgataactttccaccattt
gaatatccagaccctgaagataataatgattctaatgagaatgaaggcaatgataaagac
aattacaatcaagatgaagagtattatgatcaagagatggaagctaataaccaaaatgat
gaagatgattataataattacaataacggaccagatgtgaacaatatggggcctatgcct
cctaacatgcctcctcctatgggtaacatgatgagaccaccaatgccaatgggtcctcca
atggggcctggtatgggacctcccatgggccctggaatgggtcctatgggaccaatgcat
atgggtccacctccaccgatgggcggattgcctcctatgggcagcatgccaccaatgggt
aatatgccaccaatgggcaacatgccgccgaggccgcctttctctgacaatggctacaac
aaaggaggctatgataatcagtaccaacagaataatgaggaatacaacgaagaagaatct
tacgatcaaaactatgatgatgagaactataatgaagatggtgaaggagaggaaggagga
tacgatgggcgtcagaatcaaaggtggggcggaggttatagaggccggggtagagggcga
ggccgcggcatgaacgggcatggcggacgcggcaactggcgcggcaacagcggaggacgc
ggcgcgccgtggaaccggcggggcggcggcgccaaccgcggcttcaggcgcggcggcaaa
cctattcctaactag
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integrated database retrieval system
