Pectinophora gossypiella (pink bollworm): 126371707
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Entry
126371707 CDS
T09293
Name
(RefSeq) nucleoporin Nup188
KO
K14311
nuclear pore complex protein Nup188
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Pathway
pgw03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126371707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgw03019
]
126371707
Messenger RNA biogenesis [BR:
pgw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126371707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Motif
Other DBs
NCBI-GeneID:
126371707
NCBI-ProteinID:
XP_049872984
LinkDB
All DBs
Position
2:complement(4899734..4908277)
Genome browser
AA seq
1831 aa
AA seq
DB search
MACNVSYWKRLWRWTTSESLSKEEVAKVLECNNVVDGLRQGLASYKPFKADAYTKLQSKH
SDQAKLLSVVQTLQNYVDVDCFQLWEIIKHYLCDISYGTPTNALKNVAFVDTRPTFLLPN
VWKFYYNERLFLLKLLLYIIQFKDNTNHKYQEQFEKIICDIGIENIKISLLSQFEKLLSA
APPPRKIQSDFASETVRQEWAEANLREQLAILQILMLIANEESFSEEQFKKLFGLFRKHS
FGKNQGYHDLLEERHREPCMRIMYMEVSLFMVILDDSKIKNLPSWIESTKESVEYELTKL
QKNTEHSAMLLTWMLLTLKSVQHMKLFESQYQHYGATALRMRVFEFLQQMLNSSVLSDKS
KCALVTRKRMFKLLNELCDKFDGDGTISHQAGIMQLCADLLRSQEIACQFWELHQKEEGC
GIVSLWNTALEFFPYNFSALSTLAAGLAQGGKCSVRNLIAELKCLPVYTEIYNPNSVPIM
SLQNDDAVVGREYFPLGDPSYRIESGSRATIMERKEGTMIHFRTPYSYWTILNNEIEKAL
DRKQHHQQNINVTLQRVYEGAKVLKGVLKTLVEDREIPKSLVAPSEGVFDVLVRFMRTET
PPLALLVECLEVCTALIPAFPKEIHLRLINTGLLPRIINHHLTHVEYANGVSFDSAAVGS
YLVTIEQPTGSYYFLGAYIDMLCAFHEAPFDERITTDIIHPGLILTLREVFPNVCGWRYS
NTSQRRDLIQRCARFLTLVLEQTKDTGNGTSKLKRTCVYSLLHTENALELLKIISAGNNQ
LESMIQDETNWISGTGSQYLSAIQRCVAIIMFALRLKTMVSERSEVTPLEHLIFAQNKQK
DSLKVVPKVASYINHAFNKNLPVLCCRLLRRFADDFQMSLFASLDMTAYQVRVMFLDRLR
DEYETIDLKVAILEFVATCIGKQPGLTEAFFMMNHVNAKAEDKEKDKCGKEKTLDTDDSF
EGILGYLADYLGTVKSDAKLLHSPLLGCMMGLFHALWKNNMQILVKKLRENPKFWEHLTS
PLFNEIQPGLRTYTQIFNVLGIELFVSRGKVDSNLKEMLEQFFDVSKKHLDTWIKYIFSF
KGREDTEEVVDKVPVWLGLLTSWKDFTTIFCKCLPFSLNIAHKAKMVAPCMNALLNELDE
LKDGRLVVILAELYVIMLANFKDDCFDNRKVSAKQIDCLLTNTAIVYECLHLRAIRAILS
IGTVAISSLDYEIKANSVLAQNIIRAVTNINSLELEKLFDYIKDEPKIERKENGHAIRED
IPPVVLSLAMLEQCLELYDDIFSGLSHWFQSSRFINKVLCCLQICLQNRRHYQTSLAALR
CLTAYARGPFSKDLLFSDVDQFMWLQLLPPKIDSNGGSLTWKPQEWWKVYSYSLDFISMM
VMKHGQFFASDAITFVGVHLDHLIEAVLMPRQIANLDSLNLCASTLNLVVQLVKFEARWR
IQNINSLTGIMRSISACLYQCVTLMMRARRSSDPALQSMEEVANQAPVLHRTLEILHMAT
LCLLAFSPDLLSLLADPGLDLERWQPLVELHFGAPKISYEPFPQLTFGTLLAAICLLTRS
LNHAYHAEEGSGSRSPRGRRRACSCGSPGDSRRANRSESLTSISSVASAVPWPNERLVAG
ATQAAATLLASQALLAVRDPNVPSRHKQLVRRELSSELTAFHDFVRKRILCAAHARPHLI
RNKLGAWPLAADDTELKKIEDARKDKDNICIDDDDRALAPPPPPKRVSHDSMREYVLRKH
YLDKCAQTPTKGPPSPVSHSTPASDKKKEASRSSKRVSWAETTRDSDESLDSSLEEIEPV
YSNLTDVQINNDEDYFHFLSVVFLYICQTEL
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atggcctgtaatgtaagttattggaaacgcttgtggcgttggacgacgtcagagagcttg
tcgaaggaggaggtggcgaaagtgttggaatgtaataatgtggtcgatggactccgtcag
ggcctcgctagttacaagccattcaaagccgacgcttatactaagttgcagtcaaagcac
tctgaccaggccaaactgctgagtgtagtacagacgctacaaaactatgtcgatgtggat
tgcttccaattatgggaaataataaaacactacttgtgtgatatttcatatggaacacca
acaaatgcccttaaaaatgttgcttttgttgacacaagacctactttccttctgccaaat
gtatggaagttttattataatgagagactgttcttgctcaagctattactatacataata
cagttcaaagacaatacaaatcataaatatcaagaacagtttgaaaaaataatctgtgat
ataggaattgagaacataaaaatatcacttctttcacaatttgagaagttattgtctgct
gctcctccacctaggaaaattcagagtgactttgcaagtgagacagtcagacaagaatgg
gcagaagccaatcttagggaacaacttgctatccttcaaatactcatgctaatagcaaac
gaagaatcattctctgaagaacagttcaaaaagctgtttgggttgttcagaaagcacagt
tttggtaagaatcagggttaccatgatttgttggaggagaggcacagagagccttgtatg
aggattatgtacatggaagtcagtttgtttatggtcattctggatgatagtaaaattaaa
aacctaccttcatggatagaatccacaaaagaatcagttgaatatgaactcactaaactc
cagaaaaatacagagcacagtgctatgttattgacttggatgctgttgactttgaagagt
gtccaacacatgaaactttttgaaagtcagtatcaacattatggagccacagcattgcga
atgcgcgtttttgaattcctacaacaaatgctcaacagctctgtattgtctgacaaatca
aaatgcgctttggtaaccagaaaacgcatgttcaagcttctaaacgagctgtgtgacaaa
tttgacggcgacggtaccattagccatcaagccggcatcatgcagctatgtgcagatctg
ctgcgttcccaagagatcgcctgtcagttctgggagctccatcaaaaggaggaaggatgt
ggaattgtctcactgtggaatacagcattagagtttttcccatataactttagtgcactg
tctactttagcggctgggttagcgcaaggtggaaagtgcagtgttagaaacttgatagct
gaactaaagtgtctgccagtatacaccgaaatctacaacccaaattctgtaccaataatg
tctttacaaaatgacgatgctgttgtgggccgagaatacttccctcttggagacccttct
taccgcatcgagtcgggctctagagctacaatcatggagagaaaagagggtaccatgata
cacttccgaacaccatactcttactggacaatattaaacaatgagatagaaaaagcatta
gatagaaagcaacaccatcaacaaaacataaatgttacgcttcagcgagtgtatgaggga
gccaaagtgttgaaaggggtactaaaaacattggtagaagacagagaaattccaaagagt
ttggtcgcgcccagtgagggagtgtttgatgtgttggtgagattcatgagaacagaaaca
ccaccattggccttattggttgaatgtctcgaggtctgcactgctttgattcctgctttc
ccaaaggaaatacatttaaggctgataaatactggtcttcttccacgtataataaatcac
cacctgacccatgtcgaatacgcgaacggggtgtctttcgactctgctgccgttggctca
tatctagtgacaattgagcaacctactggaagttattactttttgggcgcatacattgat
atgctatgcgctttccatgaggccccatttgacgagcggattacgacagacataatccac
ccgggtctcattctgactcttcgtgaggtattcccaaacgtatgtggctggcgttatagt
aacaccagtcaacgtcgcgacttgatacagcgctgtgctaggttcctgaccctggtatta
gagcagaccaaagacactggtaatggcacctctaagctgaaacgcacgtgtgtttacagc
ttgttgcacacagaaaacgctttggaattgttgaagattatttctgctggtaacaaccaa
ttagaaagtatgattcaagacgaaacaaactggatatctggaacaggatcccagtatctg
tctgctatacaaagatgcgtggcaattataatgttcgcactacgactgaagacaatggta
tcggaaaggagtgaggtcacgcctttggaacatcttatattcgcacaaaataaacagaaa
gattctttgaaagtggtgccgaaggtggccagctacatcaaccacgcgttcaataagaat
ttaccagttttgtgctgtcgactattgaggagatttgcagacgattttcaaatgtccctc
ttcgcgtctctggacatgactgcttatcaagttcgagtaatgttcctcgatcgactccgc
gacgaatatgaaactattgacttaaaagtagccatcttggaatttgtagcaacatgcatc
ggaaaacaaccaggcctcactgaagctttcttcatgatgaaccacgtgaatgcaaaggca
gaagataaagaaaaggacaaatgtggaaaagaaaagactttggataccgatgatagtttt
gaaggtatcttagggtacttggcggactatctgggtactgtgaaatcggacgccaaatta
cttcacagtccacttttaggatgtatgatggggctattccatgctctatggaaaaataac
atgcaaattctggtaaagaaattgcgagaaaatccaaaattctgggaacatctaacgagt
ccacttttcaatgaaattcaaccaggacttagaacttacacacagatattcaatgtcctc
ggaatagaattatttgtatctagaggaaaagtagactccaatttgaaagagatgcttgaa
caatttttcgatgtcagcaagaaacatttggatacctggatcaaatatatattctctttt
aaaggcagagaagatacggaggaagtggtagataaagttccagtttggttgggactgttg
acttcatggaaagacttcacaacaatcttctgcaaatgtttgcctttcagtttgaacatc
gcacataaggcgaaaatggttgcgccctgtatgaatgctctgttgaatgaactcgacgaa
ctcaaggatggcaggttggttgtcattttggctgagttgtatgttataatgttagcaaac
ttcaaagacgactgttttgacaacagaaaagtgagcgcgaaacaaattgattgtttactt
actaatacggcaatcgtttatgagtgcctgcacctacgagctatcagagcaattctctca
atcgggactgttgctatcagtagcttggattacgaaattaaagcgaacagcgttttagca
caaaacataattcgagctgtgacgaatatcaacagcttagaacttgagaaattatttgac
tatatcaaagacgagcccaaaatagaaaggaaagagaatggacatgcaatcagagaagat
attcctcctgtagtgttatctttggcgatgttggaacagtgcctggagttgtacgatgac
atattctcagggttgtcgcactggttccagtccagcaggttcatcaacaaagttctctgc
tgcttacaaatctgtttgcaaaacagacgtcactaccagacatccttagcagcgctacgt
tgtctaacagcttatgcaagaggtccattttctaaggatttgttattcagtgatgtagac
cagtttatgtggctgcagctcttgccaccgaaaatagattctaacggaggatctttgaca
tggaagcctcaagaatggtggaaggtatactcatacagcttggatttcatatccatgatg
gtgatgaagcatggccagttcttcgctagtgacgcgatcacgttcgtcggagtccacttg
gatcatctgatagaagccgtcttgatgccacgacagattgcaaatttagactccctgaac
ctttgcgcctctaccttgaaccttgtagtacagcttgtcaaatttgaggcacgatggcgc
atccagaatatcaattctttgactgggattatgcgcagcataagcgcatgtttgtatcaa
tgtgtgacgctgatgatgcgcgcgcggcggtcgtccgatccggctttacagtccatggaa
gaggttgccaaccaagctcctgtattacacaggactctcgaaatactgcacatggcgacg
ctctgcttgctagcgttcagcccggatctgctgtctctactggcggaccctgggctggac
ctggaacgctggcagcctctcgtggaacttcacttcggagcccccaagatatcctacgaa
ccattcccgcagttgacgttcggcacgcttctggcggccatttgtttactcaccagatct
cttaaccatgcttatcacgcggaggaaggcagcgggtcccgctccccgcgcggccggcgc
cgggcgtgctcgtgcggcagcccgggcgactcgcgccgcgccaaccgcagcgagtcgctg
accagcatctcgtccgtcgccagcgccgtgccctggcccaacgagcggctcgtcgccggc
gccacgcaggctgctgccacgctgctcgcctcccaggcgctactagccgtacgtgacccg
aatgtcccttcccgccataagcaactggttcgccgtgaactcagttccgaactcaccgca
ttccacgactttgtgcgcaagcgtatcttgtgtgccgcacacgcgcgcccgcatctcatc
cgcaacaaactgggcgcatggcctctagctgccgatgacaccgagttgaaaaaaattgaa
gatgcaagaaaagacaaggataatatttgtatcgatgatgatgatcgtgcgttggcccca
ccaccgcctccaaaaagagtatcgcatgactcgatgcgcgagtatgttttacgcaaacat
tatttagataaatgtgcccagacaccgactaaaggaccaccgtctcccgtctcccactct
accccagcttctgacaagaagaaggaagcttccagaagctctaagcgtgtgtcttgggcg
gagaccacaagggacagtgacgagagcctcgatagttcgctggaagaaatagagcccgtc
tattcaaatctaacagatgtgcaaatcaacaatgatgaagactacttccactttttatct
gttgtgttcctttatatttgtcaaacagaactgtaa
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